Rroxscaffold_3G00256470

Lectin-domain containing receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0018123
Physical Location & Seq
Forward (+)
50860980 .. 50863259
2280 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00256470.1

Sequence Viewer

Length: 1896 bp
ATGGATTCCCTACCATGCTTATGGTGGATATGGTTAATCATTTCAATCACCTTTCTTGCAAAACAAGAAACCCAACTTCTAGCACATAACCACCAAAAACGACCTACAACAAATGTAACCAAGCACCTTCACTTCCCAAGTTTTCACCCAAGTAATCCTGAATTGAAATGCCTTGGAAATGCAGTCATCTCAGAAGAGAAGGGTGTGATTCAAATACCTCATGCATCATTAGAAGTTCAACCCCAGACATACCAAGTAGGCAGAGCTCTTTATTCTTCTCATATACGCCTATTTGATCCAATGACTCTAACCCCAGCTTCTTTCCAAACAACCTTCTCTTTCCAATTCACCAACTCCACCATAAATCGCAGTGGAAATGGCCTAGCCTTTGTCATCGTCCCGGATGAATTCACCACTGGAAAACCAGGCCCATGGCTTGGTATTGTCAACGATGCATGCAACCATTACAAGGTCTTTGCAGTTGAATTTGACACTAGCCATGACCCACAGTTTGGTGATCCCAACGATGATCACGTTGGGATCAACCTAGGAACCATTGTGTCCTTCAAAACCGCAAATTCGTCCGAGGCTAGTGTTTCTCTCCATAATCACACGGTAGTCCACCGGGTTTGGATCACCTACGATGGATATCTTAGGTGGATCACCCTCCATCTGGGGATAGACGGCGACCCTAAGCCCTCACAACCTCTACTATCTTCATCTTTAAATCTTTCTCCATTTCTTGAAGAATACATGTTTGTTGGGTTCTCTGCTTCCACCGGAGACTCATCCCAGATCCACAATATATTCTCATGGAACTTTTCGTCGACAGTTCCAGCTTCTCTTCCAATCCCATCACCCAAAATTTGTCACAGAAATGTAAAACACCAGGTCTCCAAGTACTCAAAAACAGGCCAAAGGGAGCCACCAAGCGGTTTCTTGATCTTTGTAGCTTTATTGGGATTGTGTAGTTTGGCTTTTCTTGGTTTCTACTTCAGCAGTCAGAGAAAGAAGAGCAGCTCGGAGGAGGCGTTTTCAAGATTCCTTGAAAGGAAGAAAAGGCCAATGCTTCCAAGCAAACCTCGCAAGTTTACATTTACAGAGCTTTACAGTGCAACGCAACGTTTCAGCAGAGTCCATGTATTGGCAAGTGATGCTACTGGTGTTTTGTATAGAGGGACGCTCACTAATGGGTATCACGTTGCCGTGAGGCGGTTCTCAACTCGGTCTTTGGGTTCCTCGAGCTCGCGCTTTGATTGGGTCCGAGTTAAGAAAAGAATCGGTGAAATAACTCAGGTGGTAGCTCACCCAAGTCTACCGATTATACGAGGGTGGTGCTGTGAAAGCGGAGAGGCCATGATCGTCTACGATCATTACCAGAACGGAAGCTTGGACCGATGGCTGTTTGGGCTAGGAACGCTCCCATGGACGTGGCGGTTCAAGCTCATCAAAGACATAGCAGAAGCTCTAAGTTTCCTCCACTCCAAACAACTCGCTCATGGAAACTTAAACACAAGCATTATCTTCCTCGACGTGAACTACCGGGCCGTTGTTGGAGACTACCGGTTCGGATTCTTTTCGGGCGAGTCGGGTCGAGATGACCCGGTTTCTGGTATGAGAGCGGATGTGTTCGGGTTTGGAATGTTGGTATTGGAAATTGTAACTGGTAAAAAAGAGGAGGAGGTTGGAGATGACTTGGTGGGACTTTTAGGGTTCGTAGGGGAAATGCATGGGAAGGGAGAGATGGTGAAGGTTGTGGATGAGAGATTGGGAGACCAGGTTAACTGGGAGGAAGCGAGTCGGGTTTTGAAAATTGGGCTGAGTTGCGCCACAGCGAGTTGTAGCAGGCCCAACATGAATGAGGTGTTGCAGTGCCTCACTAATGCACACCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Lectin_legB Pkinase_Tyr

Protein Analysis

631

Amino Acids

70.64

Weight (kDa)

8.41

Isoelectric Point (pI)

37.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 43 - 280 1.3e-56 Legume lectin domain
Lectin_L-type_dom PF18483 59 - 267 2e-08 Legume lectin beta-barrel domain
PK_Tyr_Ser-Thr PF07714 380 - 521 9.3e-10 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0018123)

Species Orthologous Gene IDs
prunus_persica Prupe.5G088200_v2.0.a1
rosa_chinensis RchiOBHm_Chr7g0199741
rosa_laevigata RLG00000003774
rosa_multiflora Rmu_sc0002748.1_g000023
rosa_roxburghii Rroxscaffold_3G00256470
rosa_rugosa Rorug07G0056000
rosa_samantha Rh7AG181400 Rh7BG184200 Rh7CG190900 Rh7DG184200
rosa_wichuraiana Rw7G015900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 3 cut(s) 437, 512, 1144
AccBSI CCGCTC 1 cut(s) 1622
AccI GTMKAC 3 cut(s) 827, 1315, 1365
AccII CGCG 1 cut(s) 1249
AciI CCGC 6 cut(s) 573, 933, 1213, 1347, 1435, 1622
AclI AACGTT 1 cut(s) 1123
AclWI GGATC 6 cut(s) 290, 512, 548, 641, 668, 790
AcsI RAATTY 4 cut(s) 407, 485, 577, 864
AcuI CTGAAG 1 cut(s) 979
AfaI GTAC 1 cut(s) 902
AfiI CCNNNNNNNGG 8 cut(s) 437, 469, 512, 673, 932, 1144, 1212, 1610
AflIII ACRYGT 1 cut(s) 753
AgeI ACCGGT 1 cut(s) 1563
AjiI CACGTC 2 cut(s) 1431, 1534
AjnI CCWGG 3 cut(s) 424, 888, 1776
AjuI GAANNNNNNNTTGG 2 cut(s) 1373, 1405
Alw21I GWGCWC 2 cut(s) 268, 1247
Alw26I GTCTC 4 cut(s) 777, 898, 1551, 1767
AlwI GGATC 6 cut(s) 290, 512, 548, 641, 668, 790
Ama87I CYCGRG 1 cut(s) 1240
AoxI GGCC 7 cut(s) 379, 427, 913, 1061, 1353, 1545, 1847
ApeKI GCWGC 1 cut(s) 1017
ApoI RAATTY 4 cut(s) 407, 485, 577, 864
ArsI GACNNNNNNTTYG 4 cut(s) 494, 526, 1550, 1582
AsiGI ACCGGT 1 cut(s) 1563
AspA2I CCTAGG 1 cut(s) 547
AspLEI GCGC 2 cut(s) 1251, 1829
AspS9I GGNCC 5 cut(s) 428, 1261, 1393, 1545, 1848
AsuC2I CCSGG 4 cut(s) 401, 626, 1544, 1604
AvaI CYCGRG 1 cut(s) 1240
AvaII GGWCC 2 cut(s) 1261, 1393
AvrII CCTAGG 1 cut(s) 547
BanII GRGCYC 2 cut(s) 268, 1247
Bbv12I GWGCWC 2 cut(s) 268, 1247
BbvI GCAGC 1 cut(s) 1029
BccI CCATC 5 cut(s) 638, 678, 862, 1392, 1738
BceAI ACGGC 3 cut(s) 700, 1190, 1532
BcgI CGANNNNNNTGC 2 cut(s) 1317, 1351
BciT130I CCWGG 3 cut(s) 426, 890, 1778
BclI TGATCA 1 cut(s) 529
BcnI CCSGG 4 cut(s) 401, 626, 1544, 1604
BcoDI GTCTC 4 cut(s) 777, 898, 1551, 1767
BfaI CTAG 6 cut(s) 80, 383, 495, 548, 591, 1412
BisI GCNGC 1 cut(s) 1018
BlnI CCTAGG 1 cut(s) 547
BlsI GCNGC 1 cut(s) 1019
BmcAI AGTACT 1 cut(s) 902
Bme1390I CCNGG 7 cut(s) 401, 426, 626, 890, 1544, 1604, 1778
Bme18I GGWCC 2 cut(s) 1261, 1393
BmeT110I CYCGRG 1 cut(s) 1240
BmgBI CACGTC 2 cut(s) 1431, 1534
BmgT120I GGNCC 5 cut(s) 428, 1261, 1393, 1545, 1848
BmiI GGNNCC 4 cut(s) 553, 924, 1237, 1262
BmrFI CCNGG 7 cut(s) 401, 426, 626, 890, 1544, 1604, 1778
BmrI ACTGGG 1 cut(s) 1795
BmsI GCATC 3 cut(s) 233, 442, 1144
BmuI ACTGGG 1 cut(s) 1795
BplI GAGNNNNNCTC 2 cut(s) 1167, 1199
Bpu10I CCTNAGC 1 cut(s) 693
BpuMI CCSGG 4 cut(s) 401, 626, 1544, 1604
BsaBI GATNNNNATC 1 cut(s) 648
BsaI GGTCTC 2 cut(s) 898, 1767
BsaJI CCNNGG 5 cut(s) 172, 431, 547, 585, 1424
BsaWI WCCGGW 2 cut(s) 779, 1563
BsaXI ACNNNNNCTCC 8 cut(s) 878, 908, 1016, 1046, 1731, 1761, 1764, 1794
Bsc4I CCNNNNNNNGG 8 cut(s) 437, 469, 512, 673, 932, 1144, 1212, 1610
Bse118I RCCGGY 1 cut(s) 1563
Bse1I ACTGG 5 cut(s) 421, 1165, 1669, 1790, 1891
Bse8I GATNNNNATC 1 cut(s) 648
BseBI CCWGG 3 cut(s) 426, 890, 1778
BseDI CCNNGG 5 cut(s) 172, 431, 547, 585, 1424
BseGI GGATG 4 cut(s) 409, 788, 1630, 1765
BseJI GATNNNNATC 1 cut(s) 648
BseLI CCNNNNNNNGG 8 cut(s) 437, 469, 512, 673, 932, 1144, 1212, 1610
BseMII CTCAG 3 cut(s) 204, 1307, 1811
BseNI ACTGG 5 cut(s) 421, 1165, 1669, 1790, 1891
BseRI GAGGAG 3 cut(s) 1040, 1691, 1694
BseXI GCAGC 1 cut(s) 1029
BseYI CCCAGC 1 cut(s) 313
Bsh1236I CGCG 1 cut(s) 1249
BshFI GGCC 7 cut(s) 381, 429, 915, 1063, 1355, 1547, 1849
BshTI ACCGGT 1 cut(s) 1563
BsiHKAI GWGCWC 2 cut(s) 268, 1247
BsiHKCI CYCGRG 1 cut(s) 1240
BsiSI CCGG 6 cut(s) 401, 625, 780, 1543, 1564, 1604
BslFI GGGAC 3 cut(s) 383, 1192, 1716
BslI CCNNNNNNNGG 8 cut(s) 437, 469, 512, 673, 932, 1144, 1212, 1610
BsmAI GTCTC 4 cut(s) 777, 898, 1551, 1767
BsmFI GGGAC 3 cut(s) 383, 1192, 1716
BsnI GGCC 7 cut(s) 381, 429, 915, 1063, 1355, 1547, 1849
Bso31I GGTCTC 2 cut(s) 898, 1767
BsoBI CYCGRG 1 cut(s) 1240
Bsp1286I GDGCHC 2 cut(s) 268, 1247
Bsp19I CCATGG 2 cut(s) 431, 1424
BspACI CCGC 6 cut(s) 573, 933, 1213, 1347, 1435, 1622
BspANI GGCC 7 cut(s) 381, 429, 915, 1063, 1355, 1547, 1849
BspCNI CTCAG 3 cut(s) 203, 1306, 1812
BspFNI CGCG 1 cut(s) 1249
BspLI GGNNCC 4 cut(s) 553, 924, 1237, 1262
BspPI GGATC 6 cut(s) 290, 512, 548, 641, 668, 790
BspQI GCTCTTC 1 cut(s) 1007
BspTNI GGTCTC 2 cut(s) 898, 1767
BsrBI CCGCTC 1 cut(s) 1622
BsrFI RCCGGY 1 cut(s) 1563
BsrI ACTGG 5 cut(s) 421, 1165, 1669, 1790, 1891
BssAI RCCGGY 1 cut(s) 1563
BssECI CCNNGG 5 cut(s) 172, 431, 547, 585, 1424
BssT1I CCWWGG 4 cut(s) 172, 431, 547, 1424
Bst2UI CCWGG 3 cut(s) 426, 890, 1778
Bst4CI ACNGT 4 cut(s) 510, 616, 832, 1112
Bst6I CTCTTC 3 cut(s) 189, 849, 1007
BstAPI GCANNNNNTGC 1 cut(s) 1154
BstC8I GCNNGC 3 cut(s) 457, 1247, 1847
BstDEI CTNAG 6 cut(s) 190, 653, 693, 1293, 1469, 1820
BstDSI CCRYGG 2 cut(s) 431, 1424
BstF5I GGATG 4 cut(s) 409, 788, 1630, 1765
BstFNI CGCG 1 cut(s) 1249
BstHHI GCGC 2 cut(s) 1251, 1829
BstMAI GTCTC 4 cut(s) 777, 898, 1551, 1767
BstMWI GCNNNNNNNGC 6 cut(s) 1083, 1154, 1344, 1408, 1417, 1441
BstNI CCWGG 3 cut(s) 426, 890, 1778
BstNSI RCATGY 2 cut(s) 459, 757
BstSCI CCNGG 7 cut(s) 399, 424, 624, 888, 1542, 1602, 1776
BstUI CGCG 1 cut(s) 1249
BstV1I GCAGC 1 cut(s) 1029
BstX2I RGATCY 1 cut(s) 795
BstXI CCANNNNNNTGG 3 cut(s) 21, 432, 1431
BstYI RGATCY 1 cut(s) 795
BsuRI GGCC 7 cut(s) 381, 429, 915, 1063, 1355, 1547, 1849
BtgI CCRYGG 2 cut(s) 431, 1424
BtrI CACGTC 2 cut(s) 1431, 1534
BtsCI GGATG 4 cut(s) 409, 788, 1630, 1765
BtsI GCAGTG 2 cut(s) 376, 1877
BtsIMutI CAGTG 4 cut(s) 376, 414, 1117, 1877
Cac8I GCNNGC 3 cut(s) 457, 1247, 1847
CfoI GCGC 2 cut(s) 1251, 1829
Cfr10I RCCGGY 1 cut(s) 1563
Cfr13I GGNCC 5 cut(s) 428, 1261, 1393, 1545, 1848
CseI GACGC 1 cut(s) 1189
CsiI ACCWGGT 2 cut(s) 888, 1776
Csp6I GTAC 1 cut(s) 901
CspAI ACCGGT 1 cut(s) 1563
CspCI CAANNNNNGTGG 2 cut(s) 611, 646
CviQI GTAC 1 cut(s) 901
DdeI CTNAG 6 cut(s) 190, 653, 693, 1293, 1469, 1820
DraI TTTAAA 1 cut(s) 726
Eam1104I CTCTTC 3 cut(s) 189, 849, 1007
EarI CTCTTC 3 cut(s) 189, 849, 1007
Ecl136II GAGCTC 2 cut(s) 266, 1245
Eco130I CCWWGG 4 cut(s) 172, 431, 547, 1424
Eco24I GRGCYC 2 cut(s) 268, 1247
Eco31I GGTCTC 2 cut(s) 898, 1767
Eco32I GATATC 1 cut(s) 650
Eco47I GGWCC 2 cut(s) 1261, 1393
Eco53kI GAGCTC 2 cut(s) 266, 1245
Eco57I CTGAAG 1 cut(s) 979
Eco88I CYCGRG 1 cut(s) 1240
EcoICRI GAGCTC 2 cut(s) 266, 1245
EcoRI GAATTC 1 cut(s) 407
EcoRII CCWGG 3 cut(s) 424, 888, 1776
EcoRV GATATC 1 cut(s) 650
EcoT14I CCWWGG 4 cut(s) 172, 431, 547, 1424
EcoT22I ATGCAT 3 cut(s) 226, 457, 1731
EcoT38I GRGCYC 2 cut(s) 268, 1247
ErhI CCWWGG 4 cut(s) 172, 431, 547, 1424
FaqI GGGAC 3 cut(s) 383, 1192, 1716
FbaI TGATCA 1 cut(s) 529
FblI GTMKAC 3 cut(s) 827, 1315, 1365
Fnu4HI GCNGC 1 cut(s) 1018
FokI GGATG 4 cut(s) 416, 775, 1637, 1772
FriOI GRGCYC 2 cut(s) 268, 1247
Fsp4HI GCNGC 1 cut(s) 1018
FspBI CTAG 6 cut(s) 80, 383, 495, 548, 591, 1412
GlaI GCGC 2 cut(s) 1250, 1828
GluI GCNGC 1 cut(s) 1018
GsaI CCCAGC 1 cut(s) 317
HaeIII GGCC 7 cut(s) 381, 429, 915, 1063, 1355, 1547, 1849
HapII CCGG 6 cut(s) 401, 625, 780, 1543, 1564, 1604
HgaI GACGC 1 cut(s) 1189
HhaI GCGC 2 cut(s) 1251, 1829
Hin6I GCGC 2 cut(s) 1249, 1827
HinP1I GCGC 2 cut(s) 1249, 1827
HincII GTYRAC 3 cut(s) 448, 828, 1783
HindII GTYRAC 3 cut(s) 448, 828, 1783
HindIII AAGCTT 1 cut(s) 1387
HpaI GTTAAC 1 cut(s) 1783
HpaII CCGG 6 cut(s) 401, 625, 780, 1543, 1564, 1604
Hpy166II GTNNAC 8 cut(s) 448, 622, 828, 1092, 1316, 1366, 1537, 1783
Hpy188I TCNGA 6 cut(s) 193, 586, 1005, 1024, 1265, 1571
Hpy188III TCNNGA 5 cut(s) 158, 743, 940, 1038, 1595
Hpy8I GTNNAC 8 cut(s) 448, 622, 828, 1092, 1316, 1366, 1537, 1783
Hpy99I CGWCG 2 cut(s) 829, 1535
HpyAV CCTTC 6 cut(s) 137, 193, 343, 574, 1729, 1744
HpyCH4III ACNGT 4 cut(s) 510, 616, 832, 1112
HpyCH4IV ACGT 5 cut(s) 534, 1123, 1200, 1430, 1533
HpyF10VI GCNNNNNNNGC 6 cut(s) 1083, 1154, 1344, 1408, 1417, 1441
HpyF3I CTNAG 6 cut(s) 190, 653, 693, 1293, 1469, 1820
HpySE526I ACGT 5 cut(s) 534, 1123, 1200, 1430, 1533
HspAI GCGC 2 cut(s) 1249, 1827
Ksp22I TGATCA 1 cut(s) 529
KspAI GTTAAC 1 cut(s) 1783
LguI GCTCTTC 1 cut(s) 1007
LmnI GCTCC 2 cut(s) 922, 1425
Lsp1109I GCAGC 1 cut(s) 1029
LweI GCATC 3 cut(s) 233, 442, 1144
MabI ACCWGGT 2 cut(s) 888, 1776
MaeI CTAG 6 cut(s) 80, 383, 495, 548, 591, 1412
MaeII ACGT 5 cut(s) 534, 1123, 1200, 1430, 1533
MaeIII GTNAC 3 cut(s) 115, 869, 1660
MbiI CCGCTC 1 cut(s) 1622
MboII GAAGA 8 cut(s) 206, 267, 708, 758, 836, 1024, 1066, 1516
MflI RGATCY 1 cut(s) 795
MhlI GDGCHC 2 cut(s) 268, 1247
MluCI AATT 8 cut(s) 161, 344, 407, 485, 577, 864, 1656, 1812
MlyI GAGTC 5 cut(s) 298, 779, 1143, 1595, 1807
MmeI TCCRAC 2 cut(s) 1534, 1666
Mph1103I ATGCAT 3 cut(s) 226, 457, 1731
MseI TTAA 5 cut(s) 35, 725, 1269, 1508, 1782
MslI CAYNNNNRTG 3 cut(s) 19, 876, 1429
MspI CCGG 6 cut(s) 401, 625, 780, 1543, 1564, 1604
MspR9I CCNGG 7 cut(s) 401, 426, 626, 890, 1544, 1604, 1778
MvaI CCWGG 3 cut(s) 426, 890, 1778
MvnI CGCG 1 cut(s) 1249
MwoI GCNNNNNNNGC 6 cut(s) 1083, 1154, 1344, 1408, 1417, 1441
NciI CCSGG 4 cut(s) 401, 626, 1544, 1604
NcoI CCATGG 2 cut(s) 431, 1424
NlaIV GGNNCC 4 cut(s) 553, 924, 1237, 1262
NmuCI GTSAC 1 cut(s) 869
NsiI ATGCAT 3 cut(s) 226, 457, 1731
NspI RCATGY 2 cut(s) 459, 757
PaeI GCATGC 1 cut(s) 459
PaeR7I CTCGAG 1 cut(s) 1240
PciI ACATGT 1 cut(s) 753
PciSI GCTCTTC 1 cut(s) 1007
PcsI WCGNNNNNNNCGW 2 cut(s) 531, 1028
PfeI GAWTC 5 cut(s) 5, 208, 1041, 1278, 1572
PflMI CCANNNNNTGG 3 cut(s) 437, 512, 1144
PfoI TCCNGGA 1 cut(s) 399
PinAI ACCGGT 1 cut(s) 1563
PkrI GCNGC 1 cut(s) 1019
PleI GAGTC 5 cut(s) 298, 779, 1142, 1594, 1806
PpsI GAGTC 5 cut(s) 298, 779, 1142, 1594, 1806
PscI ACATGT 1 cut(s) 753
Psp124BI GAGCTC 2 cut(s) 268, 1247
Psp1406I AACGTT 1 cut(s) 1123
Psp6I CCWGG 3 cut(s) 424, 888, 1776
PspFI CCCAGC 1 cut(s) 313
PspGI CCWGG 3 cut(s) 424, 888, 1776
PspN4I GGNNCC 4 cut(s) 553, 924, 1237, 1262
PspPI GGNCC 5 cut(s) 428, 1261, 1393, 1545, 1848
PspXI VCTCGAGB 1 cut(s) 1240
PsuI RGATCY 1 cut(s) 795
RsaI GTAC 1 cut(s) 902
RsaNI GTAC 1 cut(s) 901
RseI CAYNNNNRTG 3 cut(s) 19, 876, 1429
SacI GAGCTC 2 cut(s) 268, 1247
SalI GTCGAC 1 cut(s) 826
SapI GCTCTTC 1 cut(s) 1007
SaqAI TTAA 5 cut(s) 35, 725, 1269, 1508, 1782
SatI GCNGC 1 cut(s) 1018
Sau96I GGNCC 5 cut(s) 428, 1261, 1393, 1545, 1848
ScaI AGTACT 1 cut(s) 902
SchI GAGTC 5 cut(s) 298, 779, 1143, 1595, 1807
ScrFI CCNGG 7 cut(s) 401, 426, 626, 890, 1544, 1604, 1778
SduI GDGCHC 2 cut(s) 268, 1247
SexAI ACCWGGT 2 cut(s) 888, 1776
SfaNI GCATC 3 cut(s) 233, 442, 1144
Sfr274I CTCGAG 1 cut(s) 1240
SinI GGWCC 2 cut(s) 1261, 1393
SlaI CTCGAG 1 cut(s) 1240
SmiMI CAYNNNNRTG 3 cut(s) 19, 876, 1429
SmlI CTYRAG 1 cut(s) 1240
SmoI CTYRAG 1 cut(s) 1240
SphI GCATGC 1 cut(s) 459
Sse9I AATT 8 cut(s) 161, 344, 407, 485, 577, 864, 1656, 1812
SsiI CCGC 6 cut(s) 573, 933, 1213, 1347, 1435, 1622
SspMI CTAG 6 cut(s) 80, 383, 495, 548, 591, 1412
SstI GAGCTC 2 cut(s) 268, 1247
StyD4I CCNGG 7 cut(s) 399, 424, 624, 888, 1542, 1602, 1776
StyI CCWWGG 4 cut(s) 172, 431, 547, 1424
TaaI ACNGT 4 cut(s) 510, 616, 832, 1112
TaiI ACGT 5 cut(s) 537, 1126, 1203, 1433, 1536
TaqI TCGA 4 cut(s) 827, 1241, 1530, 1594
TaqII GACCGA 2 cut(s) 1215, 1410
TasI AATT 8 cut(s) 161, 344, 407, 485, 577, 864, 1656, 1812
TatI WGTACW 1 cut(s) 900
TfiI GAWTC 5 cut(s) 5, 208, 1041, 1278, 1572
Tru1I TTAA 5 cut(s) 35, 725, 1269, 1508, 1782
Tru9I TTAA 5 cut(s) 35, 725, 1269, 1508, 1782
TscAI CASTG 4 cut(s) 376, 421, 1117, 1877
TseFI GTSAC 1 cut(s) 869
TseI GCWGC 1 cut(s) 1017
Tsp45I GTSAC 1 cut(s) 869
TspDTI ATGAA 3 cut(s) 420, 708, 1871
TspGWI ACGGA 1 cut(s) 1398
TspRI CASTG 4 cut(s) 376, 421, 1117, 1877
Van91I CCANNNNNTGG 3 cut(s) 437, 512, 1144
VpaK11BI GGWCC 2 cut(s) 1261, 1393
XapI RAATTY 4 cut(s) 407, 485, 577, 864
XceI RCATGY 2 cut(s) 459, 757
XcmI CCANNNNNNNNNTGG 1 cut(s) 21
XhoI CTCGAG 1 cut(s) 1240
XmaJI CCTAGG 1 cut(s) 547
XmiI GTMKAC 3 cut(s) 827, 1315, 1365
XspI CTAG 6 cut(s) 80, 383, 495, 548, 591, 1412
ZrmI AGTACT 1 cut(s) 902
Zsp2I ATGCAT 3 cut(s) 226, 457, 1731
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.