Rroxscaffold_4G00294420

The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
Physical Location & Seq
Forward (+)
14487203 .. 14500225
13023 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00294420.1

Sequence Viewer

Length: 1206 bp
ATGCTCACCAAAATCATCAAACGCGGCCACCGCAAACCCTCCAAGCCCGACGACCCTTCAGACTCCAAGCCCGACCCGCAACCCGCCGCCGCTCCGAACCCAATGGAACCCCTCCCTCTCTTCCAAAACGTCGCCGTTTCCGACCGCGCATCCCTCTTCCTCCGCAAGCTCCAACTCTGCTCCTTCCTCTGCGACTTCTCCAACTCCGGCAAGTGGGCCCGCGAAATCGAGCTCAAGCGCCAAACCCTACTCGAACTCGTCGACTTCATCGACTCCTCCGGCAGCCCCAAACTCGTCACCCCTCAATTGCAGGAAGACTTCATCCGCATGGTCTCCGTCAACCTCTTCCGCTGCCTCCCTCCGGCCTCCGACTCCGCCGACCTCGGCGACGACGACGAGCCCTACCAGGAGCCCTCGTGGCCGCACCTCCAAATCGTCTACGAGCTTCTGCTGAGGTACATTGCTTCCTCTGAAACCGACGCCAAATTGGCCAAGCGCTTCATTGATCATATCTTCGTGCTGAGGTTAATGGAGCTCTTCGATTCCGAAGACCCGAGGGAACGAGACTATCTGAAAACGCTTCTGCATAGGATATATGGCAAGTTCATGGTGCACAGACCGTTTATAAGGAAGGCCATGAACAATGTGTTCTATAGGTTTATTTTCGAGACGCAGAGGCATTGTGGGATTGGGGAGTTGTTGGAGATTTTGGGGAGCATTATAAATGGGTTTGCTTTGCCAATGAAAGAGGAGCATAAGTTGTTCCTGGTCAGGGCACTTATTCCTCTGCATAAACCCAAGGGGTTTTGGGCATATCATCACCAGTTGGCCTATTGTATTATACAGTTTGTTGATAAGGATTATCATCTTGCGGAATTAGTGATCAGAGGGTTGTTGAAGTATTGGCCGGTTACTAATTGTCAGAAGGAGGTTCTGTTTCTTGCAGAGTTGGAAGAGGTGTTGGAGGCGACTCCGGCTTCGGAGTTCCAGAGGTGTATGCTGCCACTCTTTAGACAGATTGGACGATGCCTGACTAGCGCGCATTTCCAGAACCGGAATGTGATATTACCATTACTCTTTGACGCGTTAGAGAAGAACACGCAAGGTCACTGGAACCAGGGTATACACGATCTGACAGCCAATGTGCGAAAGATATTCCAGGAAATGGACTTCGAATTGTTTGAAGAGTGCCAGGAGCAATACTAG

Protein Analysis

401

Amino Acids

46.79

Weight (kDa)

6.18

Isoelectric Point (pI)

37.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B56 PF01603 38 - 350 1.8e-136 Protein phosphatase 2A regulatory B subunit (B56 family)
B56 PF01603 350 - 401 1.4e-13 Protein phosphatase 2A regulatory B subunit (B56 family)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0015690)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 626, 722
AccB7I CCANNNNNTGG 1 cut(s) 1165
AccBSI CCGCTC 1 cut(s) 92
AccI GTMKAC 3 cut(s) 261, 438, 1123
AccII CGCG 5 cut(s) 24, 147, 222, 1040, 1085
AcoI YGGCCR 4 cut(s) 25, 419, 489, 905
AcuI CTGAAG 1 cut(s) 42
AcyI GRCGYC 1 cut(s) 480
AfaI GTAC 1 cut(s) 458
AfeI AGCGCT 1 cut(s) 497
AfiI CCNNNNNNNGG 4 cut(s) 213, 361, 772, 1165
AflIII ACRYGT 1 cut(s) 1083
AgsI TTSAA 2 cut(s) 898, 1184
AjnI CCWGG 5 cut(s) 405, 765, 1116, 1158, 1191
AluBI AGCT 4 cut(s) 169, 232, 445, 535
AluI AGCT 4 cut(s) 169, 232, 445, 535
Alw21I GWGCWC 3 cut(s) 234, 537, 615
Alw26I GTCTC 3 cut(s) 337, 558, 662
Alw44I GTGCAC 1 cut(s) 611
Ama87I CYCGRG 1 cut(s) 553
Aor51HI AGCGCT 1 cut(s) 497
AoxI GGCC 8 cut(s) 25, 216, 363, 419, 489, 633, 828, 905
ApaI GGGCCC 1 cut(s) 220
ApaLI GTGCAC 1 cut(s) 611
ApeKI GCWGC 3 cut(s) 282, 351, 1000
ArsI GACNNNNNNTTYG 2 cut(s) 961, 993
AspLEI GCGC 5 cut(s) 149, 240, 498, 1040, 1042
AspS9I GGNCC 2 cut(s) 216, 217
AsuHPI GGTGA 2 cut(s) 289, 812
AsuII TTCGAA 1 cut(s) 1173
AvaI CYCGRG 1 cut(s) 553
BaeGI GKGCMC 3 cut(s) 220, 615, 778
BalI TGGCCA 1 cut(s) 491
BanII GRGCYC 5 cut(s) 220, 234, 402, 414, 537
BauI CACGAG 1 cut(s) 415
BbsI GAAGAC 2 cut(s) 321, 555
Bbv12I GWGCWC 3 cut(s) 234, 537, 615
BbvCI CCTCAGC 2 cut(s) 452, 521
BbvI GCAGC 3 cut(s) 294, 338, 987
BceAI ACGGC 1 cut(s) 119
BciT130I CCWGG 5 cut(s) 407, 767, 1118, 1160, 1193
BclI TGATCA 2 cut(s) 505, 882
BcoDI GTCTC 3 cut(s) 337, 558, 662
BfaI CTAG 2 cut(s) 1035, 1204
BfmI CTRYAG 1 cut(s) 652
BfoI RGCGCY 2 cut(s) 241, 499
BglI GCCNNNNNGGC 2 cut(s) 418, 488
BisI GCNGC 7 cut(s) 25, 87, 90, 283, 352, 422, 1001
BlsI GCNGC 7 cut(s) 26, 88, 91, 284, 353, 423, 1002
Bme1390I CCNGG 5 cut(s) 407, 767, 1118, 1160, 1193
BmeT110I CYCGRG 1 cut(s) 553
BmgT120I GGNCC 2 cut(s) 216, 217
BmiI GGNNCC 4 cut(s) 108, 218, 411, 1115
BmrFI CCNGG 5 cut(s) 407, 767, 1118, 1160, 1193
BmsI GCATC 2 cut(s) 158, 1016
BpiI GAAGAC 2 cut(s) 321, 555
Bpu10I CCTNAGC 2 cut(s) 452, 521
Bpu14I TTCGAA 1 cut(s) 1173
BpuEI CTTGAG 1 cut(s) 218
BsaBI GATNNNNATC 1 cut(s) 864
BsaHI GRCGYC 1 cut(s) 480
BsaI GGTCTC 1 cut(s) 337
BsaJI CCNNGG 4 cut(s) 382, 554, 798, 1117
BsaWI WCCGGW 1 cut(s) 1053
BsaXI ACNNNNNCTCC 6 cut(s) 401, 431, 743, 773, 920, 950
Bsc4I CCNNNNNNNGG 4 cut(s) 213, 361, 772, 1165
Bse118I RCCGGY 1 cut(s) 907
Bse1I ACTGG 2 cut(s) 823, 1115
Bse3DI GCAATG 1 cut(s) 459
Bse8I GATNNNNATC 1 cut(s) 864
BseBI CCWGG 5 cut(s) 407, 767, 1118, 1160, 1193
BseDI CCNNGG 4 cut(s) 382, 554, 798, 1117
BseGI GGATG 2 cut(s) 149, 321
BseJI GATNNNNATC 1 cut(s) 864
BseLI CCNNNNNNNGG 4 cut(s) 213, 361, 772, 1165
BseMI GCAATG 1 cut(s) 459
BseMII CTCAG 2 cut(s) 443, 512
BseNI ACTGG 2 cut(s) 823, 1115
BsePI GCGCGC 1 cut(s) 1038
BseRI GAGGAG 2 cut(s) 265, 764
BseSI GKGCMC 3 cut(s) 220, 615, 778
BseXI GCAGC 3 cut(s) 294, 338, 987
Bsh1236I CGCG 5 cut(s) 24, 147, 222, 1040, 1085
Bsh1285I CGRYCG 1 cut(s) 145
BshFI GGCC 8 cut(s) 27, 218, 365, 421, 491, 635, 830, 907
BsiEI CGRYCG 1 cut(s) 145
BsiHKAI GWGCWC 3 cut(s) 234, 537, 615
BsiHKCI CYCGRG 1 cut(s) 553
BsiSI CCGG 6 cut(s) 207, 279, 362, 908, 974, 1054
BslI CCNNNNNNNGG 4 cut(s) 213, 361, 772, 1165
BsmAI GTCTC 3 cut(s) 337, 558, 662
BsmBI CGTCTC 1 cut(s) 662
BsnI GGCC 8 cut(s) 27, 218, 365, 421, 491, 635, 830, 907
Bso31I GGTCTC 1 cut(s) 337
BsoBI CYCGRG 1 cut(s) 553
Bsp119I TTCGAA 1 cut(s) 1173
Bsp120I GGGCCC 1 cut(s) 216
Bsp1286I GDGCHC 7 cut(s) 220, 234, 402, 414, 537, 615, 778
Bsp143I GATC 3 cut(s) 505, 882, 1129
BspANI GGCC 8 cut(s) 27, 218, 365, 421, 491, 635, 830, 907
BspCNI CTCAG 2 cut(s) 444, 513
BspFNI CGCG 5 cut(s) 24, 147, 222, 1040, 1085
BspLI GGNNCC 4 cut(s) 108, 218, 411, 1115
BspQI GCTCTTC 1 cut(s) 542
BspT104I TTCGAA 1 cut(s) 1173
BspTNI GGTCTC 1 cut(s) 337
BsrBI CCGCTC 1 cut(s) 92
BsrDI GCAATG 1 cut(s) 459
BsrFI RCCGGY 1 cut(s) 907
BsrI ACTGG 2 cut(s) 823, 1115
BssAI RCCGGY 1 cut(s) 907
BssECI CCNNGG 4 cut(s) 382, 554, 798, 1117
BssHII GCGCGC 1 cut(s) 1038
BssMI GATC 3 cut(s) 505, 882, 1129
BssNAI GTATAC 1 cut(s) 1124
BssNI GRCGYC 1 cut(s) 480
BssSI CACGAG 1 cut(s) 415
BssT1I CCWWGG 1 cut(s) 798
Bst1107I GTATAC 1 cut(s) 1124
Bst2BI CACGAG 1 cut(s) 415
Bst2UI CCWGG 5 cut(s) 407, 767, 1118, 1160, 1193
Bst4CI ACNGT 2 cut(s) 621, 846
Bst6I CTCTTC 6 cut(s) 125, 161, 350, 542, 948, 1179
BstACI GRCGYC 1 cut(s) 480
BstBI TTCGAA 1 cut(s) 1173
BstC8I GCNNGC 3 cut(s) 167, 220, 1040
BstDEI CTNAG 2 cut(s) 452, 521
BstF5I GGATG 2 cut(s) 149, 321
BstFNI CGCG 5 cut(s) 24, 147, 222, 1040, 1085
BstH2I RGCGCY 2 cut(s) 241, 499
BstHHI GCGC 5 cut(s) 149, 240, 498, 1040, 1042
BstKTI GATC 3 cut(s) 508, 885, 1132
BstMAI GTCTC 3 cut(s) 337, 558, 662
BstMBI GATC 3 cut(s) 505, 882, 1129
BstMCI CGRYCG 1 cut(s) 145
BstMWI GCNNNNNNNGC 6 cut(s) 30, 76, 418, 488, 974, 1035
BstNI CCWGG 5 cut(s) 407, 767, 1118, 1160, 1193
BstSCI CCNGG 5 cut(s) 405, 765, 1116, 1158, 1191
BstSFI CTRYAG 1 cut(s) 652
BstSLI GKGCMC 3 cut(s) 220, 615, 778
BstUI CGCG 5 cut(s) 24, 147, 222, 1040, 1085
BstV1I GCAGC 3 cut(s) 294, 338, 987
BstV2I GAAGAC 2 cut(s) 321, 555
BstZ17I GTATAC 1 cut(s) 1124
BsuRI GGCC 8 cut(s) 27, 218, 365, 421, 491, 635, 830, 907
BtsCI GGATG 2 cut(s) 149, 321
BtsIMutI CAGTG 1 cut(s) 1108
Cac8I GCNNGC 3 cut(s) 167, 220, 1040
CfoI GCGC 5 cut(s) 149, 240, 498, 1040, 1042
Cfr10I RCCGGY 1 cut(s) 907
Cfr13I GGNCC 2 cut(s) 216, 217
CseI GACGC 3 cut(s) 488, 679, 1091
Csp6I GTAC 1 cut(s) 457
CviAII CATG 3 cut(s) 328, 607, 637
CviQI GTAC 1 cut(s) 457
DdeI CTNAG 2 cut(s) 452, 521
DpnI GATC 3 cut(s) 507, 884, 1131
DpnII GATC 3 cut(s) 505, 882, 1129
EaeI YGGCCR 4 cut(s) 25, 419, 489, 905
Eam1104I CTCTTC 6 cut(s) 125, 161, 350, 542, 948, 1179
EarI CTCTTC 6 cut(s) 125, 161, 350, 542, 948, 1179
EciI GGCGGA 1 cut(s) 364
Ecl136II GAGCTC 2 cut(s) 232, 535
Eco130I CCWWGG 1 cut(s) 798
Eco24I GRGCYC 5 cut(s) 220, 234, 402, 414, 537
Eco31I GGTCTC 1 cut(s) 337
Eco47III AGCGCT 1 cut(s) 497
Eco53kI GAGCTC 2 cut(s) 232, 535
Eco57I CTGAAG 1 cut(s) 42
Eco88I CYCGRG 1 cut(s) 553
EcoICRI GAGCTC 2 cut(s) 232, 535
EcoRII CCWGG 5 cut(s) 405, 765, 1116, 1158, 1191
EcoT14I CCWWGG 1 cut(s) 798
EcoT38I GRGCYC 5 cut(s) 220, 234, 402, 414, 537
ErhI CCWWGG 1 cut(s) 798
Esp3I CGTCTC 1 cut(s) 662
FaeI CATG 3 cut(s) 331, 610, 640
FatI CATG 3 cut(s) 327, 606, 636
FauI CCCGC 3 cut(s) 84, 91, 227
FbaI TGATCA 2 cut(s) 505, 882
FblI GTMKAC 3 cut(s) 261, 438, 1123
Fnu4HI GCNGC 7 cut(s) 25, 87, 90, 283, 352, 422, 1001
FokI GGATG 2 cut(s) 136, 308
FriOI GRGCYC 5 cut(s) 220, 234, 402, 414, 537
Fsp4HI GCNGC 7 cut(s) 25, 87, 90, 283, 352, 422, 1001
FspBI CTAG 2 cut(s) 1035, 1204
GlaI GCGC 5 cut(s) 148, 239, 497, 1039, 1041
GluI GCNGC 7 cut(s) 25, 87, 90, 283, 352, 422, 1001
HaeII RGCGCY 2 cut(s) 241, 499
HaeIII GGCC 8 cut(s) 27, 218, 365, 421, 491, 635, 830, 907
HapII CCGG 6 cut(s) 207, 279, 362, 908, 974, 1054
HgaI GACGC 3 cut(s) 488, 679, 1091
HhaI GCGC 5 cut(s) 149, 240, 498, 1040, 1042
Hin1I GRCGYC 1 cut(s) 480
Hin1II CATG 3 cut(s) 331, 610, 640
Hin6I GCGC 5 cut(s) 147, 238, 496, 1038, 1040
HinP1I GCGC 5 cut(s) 147, 238, 496, 1038, 1040
HincII GTYRAC 2 cut(s) 262, 340
HindII GTYRAC 2 cut(s) 262, 340
HinfI GANTC 5 cut(s) 62, 272, 371, 542, 970
HpaII CCGG 6 cut(s) 207, 279, 362, 908, 974, 1054
HphI GGTGA 2 cut(s) 289, 812
Hpy166II GTNNAC 5 cut(s) 262, 340, 439, 613, 1124
Hpy188III TCNNGA 3 cut(s) 667, 988, 1048
Hpy8I GTNNAC 5 cut(s) 262, 340, 439, 613, 1124
Hpy99I CGWCG 7 cut(s) 53, 134, 263, 392, 395, 398, 482
HpyAV CCTTC 4 cut(s) 66, 193, 625, 919
HpyCH4III ACNGT 2 cut(s) 621, 846
HpyCH4IV ACGT 1 cut(s) 129
HpyCH4V TGCA 5 cut(s) 310, 586, 613, 790, 944
HpyF10VI GCNNNNNNNGC 6 cut(s) 30, 76, 418, 488, 974, 1035
HpyF3I CTNAG 2 cut(s) 452, 521
HpySE526I ACGT 1 cut(s) 129
Hsp92I GRCGYC 1 cut(s) 480
Hsp92II CATG 3 cut(s) 331, 610, 640
HspAI GCGC 5 cut(s) 147, 238, 496, 1038, 1040
Ksp22I TGATCA 2 cut(s) 505, 882
Kzo9I GATC 3 cut(s) 505, 882, 1129
LguI GCTCTTC 1 cut(s) 542
LmnI GCTCC 8 cut(s) 97, 174, 185, 409, 532, 714, 751, 1195
Lsp1109I GCAGC 3 cut(s) 294, 338, 987
LweI GCATC 2 cut(s) 158, 1016
MaeI CTAG 2 cut(s) 1035, 1204
MaeII ACGT 1 cut(s) 129
MaeIII GTNAC 3 cut(s) 295, 910, 1106
MalI GATC 3 cut(s) 507, 884, 1131
MbiI CCGCTC 1 cut(s) 92
MboI GATC 3 cut(s) 505, 882, 1129
MfeI CAATTG 1 cut(s) 305
MhlI GDGCHC 7 cut(s) 220, 234, 402, 414, 537, 615, 778
MlsI TGGCCA 1 cut(s) 491
MluCI AATT 5 cut(s) 305, 485, 875, 916, 1175
MluI ACGCGT 1 cut(s) 1083
MluNI TGGCCA 1 cut(s) 491
MlyI GAGTC 4 cut(s) 56, 266, 365, 964
MmeI TCCRAC 7 cut(s) 165, 196, 225, 393, 681, 930, 942
Mox20I TGGCCA 1 cut(s) 491
MscI TGGCCA 1 cut(s) 491
MseI TTAA 1 cut(s) 527
MslI CAYNNNNRTG 1 cut(s) 326
Msp20I TGGCCA 1 cut(s) 491
MspA1I CMGCKG 1 cut(s) 351
MspI CCGG 6 cut(s) 207, 279, 362, 908, 974, 1054
MspR9I CCNGG 5 cut(s) 407, 767, 1118, 1160, 1193
MunI CAATTG 1 cut(s) 305
MvaI CCWGG 5 cut(s) 407, 767, 1118, 1160, 1193
MvnI CGCG 5 cut(s) 24, 147, 222, 1040, 1085
MwoI GCNNNNNNNGC 6 cut(s) 30, 76, 418, 488, 974, 1035
NdeII GATC 3 cut(s) 505, 882, 1129
NlaIII CATG 3 cut(s) 331, 610, 640
NlaIV GGNNCC 4 cut(s) 108, 218, 411, 1115
NmeAIII GCCGAG 1 cut(s) 363
NmuCI GTSAC 2 cut(s) 295, 1106
NspV TTCGAA 1 cut(s) 1173
PauI GCGCGC 1 cut(s) 1038
PciSI GCTCTTC 1 cut(s) 542
PcsI WCGNNNNNNNCGW 4 cut(s) 138, 258, 267, 390
PfeI GAWTC 1 cut(s) 542
PflMI CCANNNNNTGG 1 cut(s) 1165
PfoI TCCNGGA 1 cut(s) 1158
PkrI GCNGC 7 cut(s) 26, 88, 91, 284, 353, 423, 1002
PleI GAGTC 4 cut(s) 56, 266, 365, 964
PpsI GAGTC 4 cut(s) 56, 266, 365, 964
PsiI TTATAA 2 cut(s) 626, 722
Psp124BI GAGCTC 2 cut(s) 234, 537
Psp6I CCWGG 5 cut(s) 405, 765, 1116, 1158, 1191
PspGI CCWGG 5 cut(s) 405, 765, 1116, 1158, 1191
PspN4I GGNNCC 4 cut(s) 108, 218, 411, 1115
PspOMI GGGCCC 1 cut(s) 216
PspPI GGNCC 2 cut(s) 216, 217
PteI GCGCGC 1 cut(s) 1038
RsaI GTAC 1 cut(s) 458
RsaNI GTAC 1 cut(s) 457
RseI CAYNNNNRTG 1 cut(s) 326
SacI GAGCTC 2 cut(s) 234, 537
SalI GTCGAC 1 cut(s) 260
SapI GCTCTTC 1 cut(s) 542
SaqAI TTAA 1 cut(s) 527
SatI GCNGC 7 cut(s) 25, 87, 90, 283, 352, 422, 1001
Sau3AI GATC 3 cut(s) 505, 882, 1129
Sau96I GGNCC 2 cut(s) 216, 217
SchI GAGTC 4 cut(s) 56, 266, 365, 964
ScrFI CCNGG 5 cut(s) 407, 767, 1118, 1160, 1193
SduI GDGCHC 7 cut(s) 220, 234, 402, 414, 537, 615, 778
SfaNI GCATC 2 cut(s) 158, 1016
SfcI CTRYAG 1 cut(s) 652
SfuI TTCGAA 1 cut(s) 1173
SmiMI CAYNNNNRTG 1 cut(s) 326
SmlI CTYRAG 1 cut(s) 233
SmoI CTYRAG 1 cut(s) 233
Sse9I AATT 5 cut(s) 305, 485, 875, 916, 1175
SspMI CTAG 2 cut(s) 1035, 1204
SstI GAGCTC 2 cut(s) 234, 537
StyD4I CCNGG 5 cut(s) 405, 765, 1116, 1158, 1191
StyI CCWWGG 1 cut(s) 798
TaaI ACNGT 2 cut(s) 621, 846
TaiI ACGT 1 cut(s) 132
TaqI TCGA 7 cut(s) 228, 252, 261, 270, 540, 666, 1173
TasI AATT 5 cut(s) 305, 485, 875, 916, 1175
TauI GCSGC 4 cut(s) 27, 89, 92, 424
TfiI GAWTC 1 cut(s) 542
Tru1I TTAA 1 cut(s) 527
Tru9I TTAA 1 cut(s) 527
TscAI CASTG 1 cut(s) 1115
TseFI GTSAC 2 cut(s) 295, 1106
TseI GCWGC 3 cut(s) 282, 351, 1000
Tsp45I GTSAC 2 cut(s) 295, 1106
TspDTI ATGAA 6 cut(s) 256, 310, 490, 595, 653, 758
TspGWI ACGGA 1 cut(s) 325
TspRI CASTG 1 cut(s) 1115
Van91I CCANNNNNTGG 1 cut(s) 1165
VneI GTGCAC 1 cut(s) 611
XmiI GTMKAC 3 cut(s) 261, 438, 1123
XspI CTAG 2 cut(s) 1035, 1204
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.