Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0013013

Physical Location & Seq

Genomic Coordinates Reverse (-)

35302994 .. 35316188

Gene Structure 13195 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00356150.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1878 bp

ATGTCTAAACATGTACCACCTGTCGAGGCCTTGTCGGTGAGACTTGGGTCCGGTGGGGCAGATGCTGGTTATGATAGTTCCAATGGTGCCAAGGTGAGAGGCCAAGTGAGGTTGAGTTTAACCATAACTGGTCTCCAATTCTTACTCTTGCGCATGTGGGCTTGTGTCTCTGCCACCAACTTGAGCTACCAAGCCAACTTCATCAACACCCAAAACCCTCAAACCACTCCCAGATATGATGCGCTTTCCTTTCACGGCAGTGAAATTGTTGCTCGGAATTTTGGGTTTCTGAGCTCACAAGCTACTACTGGTATTGGTAAAAGGCTAAGGAAGGGTGCTCTCCCTTTGAAGGTGGTTTGTGTGGATTATCCGAGACCCGAGCTTGACAATACTGTAAATTTCTTAGAAGCTGCGCTCTTGTCTTCCTCTTTCAGAGCCTCTTCTCGCCCAGCTAAGCCCCTCAAGGTTGTGATTGCTGGTGCAGGTTTGGCTGGGTTGTCAACTGCAAAGTATTTGGCGGATGCAGGTCATAAACCCATACTACTGGAAGCAAGAGACGTTTTAGGTGGAAAGATTGCAGCATGGAAAGATAAAGATGGAGACTGGTATGAGACAGGCCTACATATATTTTTTGGGGCTTATCCAAATATTCAGAACTTGTTTGGAGAGCTTGGTATCAATGATCGATTGCAGTGGAAGGAACACTCTATGATATTTGCAATGCCAAACAAGCCAGGAGAGTTCAGCCGGTTTGATTTCCCTGAAGTTCTGCCAGCACCCTTAAATGGAATATGGGCCATATTAAAGAACAATGAGATGCTGACATGGCCAGAAAAAGTGAAGTTTGCTATCGGACTTGTGCCAGCAATTCTTGGTGGACAGGCTTATGTTGAAGCTCAGGATGGCTTGACTGTAAAGGAGTGGATGACAAAACAGGGGATACCTGATCGAGTAACTACTGAGGTGTTTATTGCCATGTCAAAGGCCCTTAACTTTATTAATCCTGATGAGCTCTCAATGCAATGCATATTGATTGCTTTGAATCGATTTCTTCAGGAGAAACACGGTTCCAAGATGGCTTTCCTTGATGGAAGTCCTCCCGAGAGACTCTGTCAACCAATCGTTGATCATATCCAGTCATTGGGCGGAGAAGTCCGGCTTAATTCCCGATTACAGAAGATTGAGCTAAATAATGATGGAACCGTGAAGAGTTTTGTACTACAAAATAACAGTGTGATTGAAGCGGATGCTTATGTATCTGCCGCTCCAGTTGATATCTTCAAGCTTCTAGTGCCTGAAAACTGGAAAGAGATTCCATATTTCAAGAAATTGGACAAACTAGTTGGAGTTCCAGTCATCAATGTACACATATGGTTTGACAGAAAACTAAAGAACACATATGATCACCTACTTTTTAGCAGAAGTCCTCTTCTAAGTGTGTATGCTGATATGTCGGTAACATGTAAGGAGTATTACAATCCAAACCAGTCTATGCTAGAGTTGGTTTTTGCACCAGCAGAAGAATGGATTTCACGCAGTGATTCAGAAATTATTGATGCTACACTCAAAGAACTTGCAAAGCTCTTTCCCGATGAGATAGCTGCAGATCAAAGCAAAGCGAAGATTTTGAAGTACCATGTTGTGAAAACACCAAGGTCTGTGTACAAAACTATACCAGATTGTGAACCCTGCCGTCCATTGCAAAGATCTCCCTTGGAGGGTTTCTATTTAACTGGTGACTATACAAAACAAAAATATTTAGCCTCTATGGAAGGTGCTGTTCTATCAGGGAAACTTTGTGCACAGGCGATTGTACAGGACTATGAATTGCTCGTTGCTCGGGGCCAGAAAAGGTTGGCTGAGGCAGGTGCTAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006629 GO:0006720 GO:0006721 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009507 GO:0009526 GO:0009534 GO:0009536 GO:0009579 GO:0009941 GO:0009987 GO:0016108 GO:0016109 GO:0016114 GO:0016116 GO:0016117 GO:0016166 GO:0016491 GO:0016627 GO:0031967 GO:0031975 GO:0031976 GO:0031984 GO:0042440 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046148 GO:0055114 GO:0071704 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00906 ko01100 ko01110 map00906 map01100 map01110

Pfam Domains

Protein Families

Amino_oxidase

Protein Analysis

625

Amino Acids

69.36

Weight (kDa)

8.53

Isoelectric Point (pI)

37.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NAD_binding_8	PF13450	158 - 224	5.6e-14	NAD(P)-binding Rossmann-like domain
Amino_oxidase	PF01593	163 - 604	8e-94	Flavin containing amine oxidoreductase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013013)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G14210 AT4G14210 AT4G14210
fragaria_vesca	FvH4_4g12690 FvH4_4g12690 FvH4_4g12690
malus_domestica	MD04G1023800.v1.1
prunus_persica	Prupe.1G174100_v2.0.a1 Prupe.1G174100_v2.0.a1
pyrus_communis	pycom04g02050
rosa_chinensis	RchiOBHm_Chr4g0411571
rosa_laevigata	RLG00000008345
rosa_multiflora	Rmu_sc0001868.1_g000004
rosa_roxburghii	Rroxscaffold_5G00356150
rosa_rugosa	Rorug04G0107900
rosa_samantha	Rh4AG169100 Rh4DG163300
rosa_wichuraiana	Rw4G014050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1856
Acc16I	TGCGCA	1 cut(s)	152
Acc36I	ACCTGC	3 cut(s)	473, 515, 1856
AccB1I	GGYRCC	1 cut(s)	86
AccB7I	CCANNNNNTGG	1 cut(s)	1141
AccBSI	CCGCTC	1 cut(s)	1265
AciI	CCGC	4 cut(s)	518, 1146, 1244, 1263
AcoI	YGGCCR	1 cut(s)	827
AcsI	RAATTY	2 cut(s)	277, 397
AcuI	CTGAAG	2 cut(s)	783, 1037
AdeI	CACNNNGTG	1 cut(s)	1538
AfaI	GTAC	6 cut(s)	15, 1218, 1365, 1634, 1664, 1815
AfiI	CCNNNNNNNGG	4 cut(s)	349, 785, 1141, 1718
AflIII	ACRYGT	2 cut(s)	10, 1460
AgsI	TTSAA	7 cut(s)	349, 893, 1042, 1241, 1282, 1324, 1630
AhlI	ACTAGT	1 cut(s)	1339
AjnI	CCWGG	1 cut(s)	733
AjuI	GAANNNNNNNTTGG	2 cut(s)	1064, 1096
AleI	CACNNNNGTG	1 cut(s)	258
Alw21I	GWGCWC	4 cut(s)	296, 340, 1014, 1804
Alw26I	GTCTC	8 cut(s)	34, 137, 172, 367, 549, 594, 605, 1099
Alw44I	GTGCAC	1 cut(s)	1800
AlwNI	CAGNNNCTG	1 cut(s)	65
Ama87I	CYCGRG	3 cut(s)	377, 1100, 1839
AoxI	GGCC	7 cut(s)	27, 100, 616, 795, 827, 984, 1843
ApaLI	GTGCAC	1 cut(s)	1800
ApeKI	GCWGC	3 cut(s)	410, 578, 1601
ApoI	RAATTY	2 cut(s)	277, 397
AseI	ATTAAT	1 cut(s)	999
AspLEI	GCGC	3 cut(s)	153, 244, 415
AspS9I	GGNCC	4 cut(s)	48, 795, 985, 1843
AsuHPI	GGTGA	4 cut(s)	49, 106, 1397, 1748
AvaI	CYCGRG	3 cut(s)	377, 1100, 1839
AvaII	GGWCC	1 cut(s)	48
BaeGI	GKGCMC	1 cut(s)	1804
BalI	TGGCCA	1 cut(s)	829
BanI	GGYRCC	1 cut(s)	86
BanII	GRGCYC	2 cut(s)	296, 1014
BbsI	GAAGAC	1 cut(s)	414
Bbv12I	GWGCWC	4 cut(s)	296, 340, 1014, 1804
BbvCI	CCTCAGC	1 cut(s)	1860
BbvI	GCAGC	3 cut(s)	397, 590, 1588
BccI	CCATC	5 cut(s)	590, 896, 1069, 1082, 1190
BceAI	ACGGC	2 cut(s)	271, 1677
BciT130I	CCWGG	1 cut(s)	735
BciVI	GTATCC	1 cut(s)	933
BclI	TGATCA	2 cut(s)	1126, 1402
BcoDI	GTCTC	8 cut(s)	34, 137, 172, 367, 549, 594, 605, 1099
BcuI	ACTAGT	1 cut(s)	1339
BfaI	CTAG	4 cut(s)	1289, 1340, 1496, 1872
BfmI	CTRYAG	1 cut(s)	1602
BfuAI	ACCTGC	3 cut(s)	473, 515, 1856
BfuI	GTATCC	1 cut(s)	933
BglII	AGATCT	1 cut(s)	1706
BisI	GCNGC	4 cut(s)	411, 579, 1263, 1602
BlpI	GCTNAGC	1 cut(s)	453
BlsI	GCNGC	4 cut(s)	412, 580, 1264, 1603
Bme1390I	CCNGG	1 cut(s)	735
Bme18I	GGWCC	1 cut(s)	48
BmeT110I	CYCGRG	3 cut(s)	377, 1100, 1839
BmgT120I	GGNCC	4 cut(s)	48, 795, 985, 1843
BmiI	GGNNCC	5 cut(s)	49, 88, 1069, 1201, 1844
BmrFI	CCNGG	1 cut(s)	735
BmsI	GCATC	6 cut(s)	52, 229, 511, 807, 1237, 1546
BoxI	GACNNNNGTC	1 cut(s)	46
BpiI	GAAGAC	1 cut(s)	414
BpmI	CTGGAG	1 cut(s)	1251
Bpu10I	CCTNAGC	3 cut(s)	326, 897, 1860
Bpu1102I	GCTNAGC	1 cut(s)	453
BpuEI	CTTGAG	2 cut(s)	202, 446
Bsa29I	ATCGAT	2 cut(s)	685, 1045
BsaI	GGTCTC	2 cut(s)	137, 367
BsaJI	CCNNGG	3 cut(s)	90, 1652, 1713
BsaWI	WCCGGW	1 cut(s)	50
BsaXI	ACNNNNNCTCC	2 cut(s)	1338, 1368
Bsc4I	CCNNNNNNNGG	4 cut(s)	349, 785, 1141, 1718
Bse118I	RCCGGY	1 cut(s)	747
Bse3DI	GCAATG	3 cut(s)	726, 1028, 1697
BseBI	CCWGG	1 cut(s)	735
BseCI	ATCGAT	2 cut(s)	685, 1045
BseDI	CCNNGG	3 cut(s)	90, 1652, 1713
BseGI	GGATG	4 cut(s)	526, 907, 930, 1252
BseLI	CCNNNNNNNGG	4 cut(s)	349, 785, 1141, 1718
BseMI	GCAATG	3 cut(s)	726, 1028, 1697
BseMII	CTCAG	4 cut(s)	281, 911, 951, 1851
BseSI	GKGCMC	1 cut(s)	1804
BseXI	GCAGC	3 cut(s)	397, 590, 1588
BseYI	CCCAGC	2 cut(s)	448, 491
BsgI	GTGCAG	1 cut(s)	501
BshFI	GGCC	7 cut(s)	29, 102, 618, 797, 829, 986, 1845
BshNI	GGYRCC	1 cut(s)	86
BshVI	ATCGAT	2 cut(s)	685, 1045
BsiHKAI	GWGCWC	4 cut(s)	296, 340, 1014, 1804
BsiHKCI	CYCGRG	3 cut(s)	377, 1100, 1839
BsiSI	CCGG	3 cut(s)	51, 748, 1156
BslI	CCNNNNNNNGG	4 cut(s)	349, 785, 1141, 1718
BsmAI	GTCTC	8 cut(s)	34, 137, 172, 367, 549, 594, 605, 1099
BsmBI	CGTCTC	1 cut(s)	549
BsnI	GGCC	7 cut(s)	29, 102, 618, 797, 829, 986, 1845
Bso31I	GGTCTC	2 cut(s)	137, 367
BsoBI	CYCGRG	3 cut(s)	377, 1100, 1839
Bsp1286I	GDGCHC	4 cut(s)	296, 340, 1014, 1804
Bsp1407I	TGTACA	3 cut(s)	1363, 1662, 1813
Bsp143I	GATC	6 cut(s)	682, 946, 1126, 1402, 1606, 1706
Bsp1720I	GCTNAGC	1 cut(s)	453
BspACI	CCGC	4 cut(s)	518, 1146, 1244, 1263
BspANI	GGCC	7 cut(s)	29, 102, 618, 797, 829, 986, 1845
BspCNI	CTCAG	4 cut(s)	282, 910, 952, 1852
BspDI	ATCGAT	2 cut(s)	685, 1045
BspLI	GGNNCC	5 cut(s)	49, 88, 1069, 1201, 1844
BspMAI	CTGCAG	1 cut(s)	1606
BspMI	ACCTGC	3 cut(s)	473, 515, 1856
BspT107I	GGYRCC	1 cut(s)	86
BspTNI	GGTCTC	2 cut(s)	137, 367
BsrBI	CCGCTC	1 cut(s)	1265
BsrDI	GCAATG	3 cut(s)	726, 1028, 1697
BsrFI	RCCGGY	1 cut(s)	747
BsrGI	TGTACA	3 cut(s)	1363, 1662, 1813
BssAI	RCCGGY	1 cut(s)	747
BssECI	CCNNGG	3 cut(s)	90, 1652, 1713
BssMI	GATC	6 cut(s)	682, 946, 1126, 1402, 1606, 1706
BssT1I	CCWWGG	3 cut(s)	90, 1652, 1713
Bst2UI	CCWGG	1 cut(s)	735
Bst4CI	ACNGT	5 cut(s)	394, 913, 1067, 1204, 1232
Bst6I	CTCTTC	3 cut(s)	445, 1202, 1434
BstAUI	TGTACA	3 cut(s)	1363, 1662, 1813
BstC8I	GCNNGC	2 cut(s)	774, 864
BstDEI	CTNAG	8 cut(s)	290, 326, 403, 453, 897, 960, 1433, 1860
BstF5I	GGATG	4 cut(s)	526, 907, 930, 1252
BstHHI	GCGC	3 cut(s)	153, 244, 415
BstKTI	GATC	6 cut(s)	685, 949, 1129, 1405, 1609, 1709
BstMAI	GTCTC	8 cut(s)	34, 137, 172, 367, 549, 594, 605, 1099
BstMBI	GATC	6 cut(s)	682, 946, 1126, 1402, 1606, 1706
BstMWI	GCNNNNNNNGC	5 cut(s)	488, 730, 826, 1018, 1291
BstNI	CCWGG	1 cut(s)	735
BstNSI	RCATGY	3 cut(s)	14, 157, 1464
BstPAI	GACNNNNGTC	1 cut(s)	46
BstSCI	CCNGG	1 cut(s)	733
BstSFI	CTRYAG	1 cut(s)	1602
BstSLI	GKGCMC	1 cut(s)	1804
BstV1I	GCAGC	3 cut(s)	397, 590, 1588
BstV2I	GAAGAC	1 cut(s)	414
BstX2I	RGATCY	1 cut(s)	1706
BstXI	CCANNNNNNTGG	1 cut(s)	544
BstYI	RGATCY	1 cut(s)	1706
Bsu15I	ATCGAT	2 cut(s)	685, 1045
BsuI	GTATCC	1 cut(s)	933
BsuRI	GGCC	7 cut(s)	29, 102, 618, 797, 829, 986, 1845
BsuTUI	ATCGAT	2 cut(s)	685, 1045
BtsCI	GGATG	4 cut(s)	526, 907, 930, 1252
BtsI	GCAGTG	3 cut(s)	265, 698, 1543
BtsIMutI	CAGTG	4 cut(s)	265, 698, 1237, 1543
BveI	ACCTGC	3 cut(s)	473, 515, 1856
Cac8I	GCNNGC	2 cut(s)	774, 864
CaiI	CAGNNNCTG	1 cut(s)	65
CfoI	GCGC	3 cut(s)	153, 244, 415
Cfr10I	RCCGGY	1 cut(s)	747
Cfr13I	GGNCC	4 cut(s)	48, 795, 985, 1843
ClaI	ATCGAT	2 cut(s)	685, 1045
Csp6I	GTAC	6 cut(s)	14, 1217, 1364, 1633, 1663, 1814
CviAII	CATG	7 cut(s)	11, 154, 582, 825, 976, 1461, 1637
CviQI	GTAC	6 cut(s)	14, 1217, 1364, 1633, 1663, 1814
DdeI	CTNAG	8 cut(s)	290, 326, 403, 453, 897, 960, 1433, 1860
DpnI	GATC	6 cut(s)	684, 948, 1128, 1404, 1608, 1708
DpnII	GATC	6 cut(s)	682, 946, 1126, 1402, 1606, 1706
DraIII	CACNNNGTG	1 cut(s)	1538
EaeI	YGGCCR	1 cut(s)	827
Eam1104I	CTCTTC	3 cut(s)	445, 1202, 1434
EarI	CTCTTC	3 cut(s)	445, 1202, 1434
EciI	GGCGGA	2 cut(s)	533, 1161
Ecl136II	GAGCTC	2 cut(s)	294, 1012
Eco130I	CCWWGG	3 cut(s)	90, 1652, 1713
Eco147I	AGGCCT	2 cut(s)	29, 618
Eco24I	GRGCYC	2 cut(s)	296, 1014
Eco31I	GGTCTC	2 cut(s)	137, 367
Eco32I	GATATC	1 cut(s)	1276
Eco47I	GGWCC	1 cut(s)	48
Eco53kI	GAGCTC	2 cut(s)	294, 1012
Eco57I	CTGAAG	2 cut(s)	783, 1037
Eco88I	CYCGRG	3 cut(s)	377, 1100, 1839
EcoICRI	GAGCTC	2 cut(s)	294, 1012
EcoO109I	RGGNCCY	1 cut(s)	985
EcoRII	CCWGG	1 cut(s)	733
EcoRV	GATATC	1 cut(s)	1276
EcoT14I	CCWWGG	3 cut(s)	90, 1652, 1713
EcoT22I	ATGCAT	1 cut(s)	1028
EcoT38I	GRGCYC	2 cut(s)	296, 1014
ErhI	CCWWGG	3 cut(s)	90, 1652, 1713
Esp3I	CGTCTC	1 cut(s)	549
FaeI	CATG	7 cut(s)	14, 157, 585, 828, 979, 1464, 1640
FalI	AAGNNNNNCTT	2 cut(s)	1143, 1175
FatI	CATG	7 cut(s)	10, 153, 581, 824, 975, 1460, 1636
FauNDI	CATATG	2 cut(s)	1370, 1399
FbaI	TGATCA	2 cut(s)	1126, 1402
Fnu4HI	GCNGC	4 cut(s)	411, 579, 1263, 1602
FokI	GGATG	4 cut(s)	533, 914, 937, 1259
FriOI	GRGCYC	2 cut(s)	296, 1014
Fsp4HI	GCNGC	4 cut(s)	411, 579, 1263, 1602
FspBI	CTAG	4 cut(s)	1289, 1340, 1496, 1872
FspI	TGCGCA	1 cut(s)	152
GlaI	GCGC	3 cut(s)	152, 243, 414
GluI	GCNGC	4 cut(s)	411, 579, 1263, 1602
GsaI	CCCAGC	2 cut(s)	452, 495
GsuI	CTGGAG	1 cut(s)	1251
HaeIII	GGCC	7 cut(s)	29, 102, 618, 797, 829, 986, 1845
HapII	CCGG	3 cut(s)	51, 748, 1156
HhaI	GCGC	3 cut(s)	153, 244, 415
Hin1II	CATG	7 cut(s)	14, 157, 585, 828, 979, 1464, 1640
Hin6I	GCGC	3 cut(s)	151, 242, 413
HinP1I	GCGC	3 cut(s)	151, 242, 413
HincII	GTYRAC	2 cut(s)	501, 1115
HindII	GTYRAC	2 cut(s)	501, 1115
HindIII	AAGCTT	1 cut(s)	1283
HinfI	GANTC	4 cut(s)	1042, 1107, 1312, 1541
HpaII	CCGG	3 cut(s)	51, 748, 1156
HphI	GGTGA	4 cut(s)	49, 106, 1397, 1748
Hpy166II	GTNNAC	7 cut(s)	501, 878, 1115, 1366, 1663, 1685, 1802
Hpy188I	TCNGA	7 cut(s)	276, 291, 372, 434, 654, 854, 1546
Hpy188III	TCNNGA	7 cut(s)	899, 1004, 1055, 1100, 1167, 1324, 1589
Hpy8I	GTNNAC	7 cut(s)	501, 878, 1115, 1366, 1663, 1685, 1802
HpyAV	CCTTC	4 cut(s)	325, 343, 691, 1766
HpyCH4III	ACNGT	5 cut(s)	394, 913, 1067, 1204, 1232
HpyCH4IV	ACGT	1 cut(s)	558
HpyF10VI	GCNNNNNNNGC	5 cut(s)	488, 730, 826, 1018, 1291
HpyF3I	CTNAG	8 cut(s)	290, 326, 403, 453, 897, 960, 1433, 1860
HpySE526I	ACGT	1 cut(s)	558
Hsp92II	CATG	7 cut(s)	14, 157, 585, 828, 979, 1464, 1640
HspAI	GCGC	3 cut(s)	151, 242, 413
Ksp22I	TGATCA	2 cut(s)	1126, 1402
Kzo9I	GATC	6 cut(s)	682, 946, 1126, 1402, 1606, 1706
LmnI	GCTCC	1 cut(s)	1270
Lsp1109I	GCAGC	3 cut(s)	397, 590, 1588
LweI	GCATC	6 cut(s)	52, 229, 511, 807, 1237, 1546
MaeI	CTAG	4 cut(s)	1289, 1340, 1496, 1872
MaeII	ACGT	1 cut(s)	558
MaeIII	GTNAC	3 cut(s)	952, 1456, 1736
MalI	GATC	6 cut(s)	684, 948, 1128, 1404, 1608, 1708
MbiI	CCGCTC	1 cut(s)	1265
MboI	GATC	6 cut(s)	682, 946, 1126, 1402, 1606, 1706
MboII	GAAGA	9 cut(s)	414, 432, 1043, 1189, 1219, 1270, 1421, 1532, 1633
MflI	RGATCY	1 cut(s)	1706
MhlI	GDGCHC	4 cut(s)	296, 340, 1014, 1804
MlsI	TGGCCA	1 cut(s)	829
MluCI	AATT	9 cut(s)	137, 264, 277, 397, 867, 1162, 1328, 1548, 1826
MluNI	TGGCCA	1 cut(s)	829
MlyI	GAGTC	1 cut(s)	1101
MmeI	TCCRAC	1 cut(s)	1324
Mox20I	TGGCCA	1 cut(s)	829
Mph1103I	ATGCAT	1 cut(s)	1028
MscI	TGGCCA	1 cut(s)	829
MseI	TTAA	7 cut(s)	119, 782, 803, 990, 999, 1161, 1730
MslI	CAYNNNNRTG	1 cut(s)	258
Msp20I	TGGCCA	1 cut(s)	829
MspI	CCGG	3 cut(s)	51, 748, 1156
MspR9I	CCNGG	1 cut(s)	735
MvaI	CCWGG	1 cut(s)	735
MwoI	GCNNNNNNNGC	5 cut(s)	488, 730, 826, 1018, 1291
NdeI	CATATG	2 cut(s)	1370, 1399
NdeII	GATC	6 cut(s)	682, 946, 1126, 1402, 1606, 1706
NlaIII	CATG	7 cut(s)	14, 157, 585, 828, 979, 1464, 1640
NlaIV	GGNNCC	5 cut(s)	49, 88, 1069, 1201, 1844
NmuCI	GTSAC	1 cut(s)	1736
NsbI	TGCGCA	1 cut(s)	152
NsiI	ATGCAT	1 cut(s)	1028
NspI	RCATGY	3 cut(s)	14, 157, 1464
OliI	CACNNNNGTG	1 cut(s)	258
PaqCI	CACCTGC	1 cut(s)	1856
PceI	AGGCCT	2 cut(s)	29, 618
PciI	ACATGT	2 cut(s)	10, 1460
PfeI	GAWTC	3 cut(s)	1042, 1312, 1541
PflFI	GACNNNGTC	1 cut(s)	1110
PflMI	CCANNNNNTGG	1 cut(s)	1141
PkrI	GCNGC	4 cut(s)	412, 580, 1264, 1603
PleI	GAGTC	1 cut(s)	1101
PpsI	GAGTC	1 cut(s)	1101
PscI	ACATGT	2 cut(s)	10, 1460
PshAI	GACNNNNGTC	1 cut(s)	46
PshBI	ATTAAT	1 cut(s)	999
Psp124BI	GAGCTC	2 cut(s)	296, 1014
Psp6I	CCWGG	1 cut(s)	733
PspFI	CCCAGC	2 cut(s)	448, 491
PspGI	CCWGG	1 cut(s)	733
PspN4I	GGNNCC	5 cut(s)	49, 88, 1069, 1201, 1844
PspPI	GGNCC	4 cut(s)	48, 795, 985, 1843
PstI	CTGCAG	1 cut(s)	1606
PstNI	CAGNNNCTG	1 cut(s)	65
PsuI	RGATCY	1 cut(s)	1706
PsyI	GACNNNGTC	1 cut(s)	1110
RsaI	GTAC	6 cut(s)	15, 1218, 1365, 1634, 1664, 1815
RsaNI	GTAC	6 cut(s)	14, 1217, 1364, 1633, 1663, 1814
RseI	CAYNNNNRTG	1 cut(s)	258
SacI	GAGCTC	2 cut(s)	296, 1014
SaqAI	TTAA	7 cut(s)	119, 782, 803, 990, 999, 1161, 1730
SatI	GCNGC	4 cut(s)	411, 579, 1263, 1602
Sau3AI	GATC	6 cut(s)	682, 946, 1126, 1402, 1606, 1706
Sau96I	GGNCC	4 cut(s)	48, 795, 985, 1843
SchI	GAGTC	1 cut(s)	1101
ScrFI	CCNGG	1 cut(s)	735
SduI	GDGCHC	4 cut(s)	296, 340, 1014, 1804
SfaNI	GCATC	6 cut(s)	52, 229, 511, 807, 1237, 1546
SfcI	CTRYAG	1 cut(s)	1602
SinI	GGWCC	1 cut(s)	48
SmiMI	CAYNNNNRTG	1 cut(s)	258
SmlI	CTYRAG	2 cut(s)	181, 461
SmoI	CTYRAG	2 cut(s)	181, 461
SpeI	ACTAGT	1 cut(s)	1339
Sse9I	AATT	9 cut(s)	137, 264, 277, 397, 867, 1162, 1328, 1548, 1826
SseBI	AGGCCT	2 cut(s)	29, 618
SsiI	CCGC	4 cut(s)	518, 1146, 1244, 1263
SspI	AATATT	2 cut(s)	649, 1757
SspMI	CTAG	4 cut(s)	1289, 1340, 1496, 1872
SstI	GAGCTC	2 cut(s)	296, 1014
StuI	AGGCCT	2 cut(s)	29, 618
StyD4I	CCNGG	1 cut(s)	733
StyI	CCWWGG	3 cut(s)	90, 1652, 1713
TaaI	ACNGT	5 cut(s)	394, 913, 1067, 1204, 1232
TaiI	ACGT	1 cut(s)	561
TaqI	TCGA	4 cut(s)	24, 685, 949, 1045
TasI	AATT	9 cut(s)	137, 264, 277, 397, 867, 1162, 1328, 1548, 1826
TatI	WGTACW	4 cut(s)	1216, 1363, 1662, 1813
TauI	GCSGC	1 cut(s)	1265
TfiI	GAWTC	3 cut(s)	1042, 1312, 1541
Tru1I	TTAA	7 cut(s)	119, 782, 803, 990, 999, 1161, 1730
Tru9I	TTAA	7 cut(s)	119, 782, 803, 990, 999, 1161, 1730
TscAI	CASTG	4 cut(s)	265, 698, 1237, 1543
TseFI	GTSAC	1 cut(s)	1736
TseI	GCWGC	3 cut(s)	410, 578, 1601
Tsp45I	GTSAC	1 cut(s)	1736
TspDTI	ATGAA	2 cut(s)	190, 1839
TspRI	CASTG	4 cut(s)	265, 698, 1237, 1543
Tth111I	GACNNNGTC	1 cut(s)	1110
Van91I	CCANNNNNTGG	1 cut(s)	1141
VneI	GTGCAC	1 cut(s)	1800
VpaK11BI	GGWCC	1 cut(s)	48
VspI	ATTAAT	1 cut(s)	999
XapI	RAATTY	2 cut(s)	277, 397
XceI	RCATGY	3 cut(s)	14, 157, 1464
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1521
XspI	CTAG	4 cut(s)	1289, 1340, 1496, 1872
Zsp2I	ATGCAT	1 cut(s)	1028

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.