Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0013939

Physical Location & Seq

Genomic Coordinates Reverse (-)

49991528 .. 49996113

Gene Structure 4586 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00368190.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2001 bp

ATGAGCAGTAGCAATTGTATTGGAATCTGTGGCATGAGGCCCTGTTGTAGAATTCTAATGGGCTATGGCTACAGAAGCTCCTCGGTTTTCGGTTCTCAGGGACCGAAATTGAGCGATGCAGTCGTTGATAATTTGTCGAAATTACGATCTAGGAGTTTAGGGTACATACGTGCAATTGATCCGAATCGGAGAGCTTTTAATGTTTCCGATTCGGATTGGGGTCATCGGTCTGGGGTTTGTACTAGTGGTGTAAATAGCGTTGGTAATGGTAGGAAGGGTGTTTTAGTGATAAGGAATGTCGCGTCGGATTTTAGGAACCACTCGACCTCGGTGGATAGTCAGGTTAATGGGAAGTCGTTTGAGAGTATTTATATTCAAGGTGGCTTGAATATGCAACCTTTGGTGATAGAGAGGATTGAGACAGGTCATGGTGATGTGGTCAAAGAAGAAGAGTCTAGGGTAGAGGTTAATGGCGCAAATGTAAATGTAAATATAGGTGATTCCAAGGGTTTGAATGACTCAACAGTTGAGAGAGAGTTGTCGGAAATTGAAAAGGAGGCCTGGAGACTGCTTCAAGATTCAGTAGTCGATTATTGTGGGAATCCTGTGGGAACTCTTGCTGCTATTGATCCAGCAGACAAGACGCCGCTCAATTATGATCAGGTCTTTATTCGAGATTTCGTCCCATCGGCACTTGCTTTCTTGCTCAATGGAGAAGCTGAGATTGTCAAGAACTTTCTGCTTCACACTTTGCAGTTACAGAGCTGGGAGAAGACAGTCGACTGTTATAGCCCTGGGCAAGGGTTGATGCCGGCAAGCTTCAAAGTTAGGACTGCTCCTCTTGATGGAAGTGATGGAAAATTTGAGGAAGTTTTAGATCCTGATTTTGGTGAATCGGCCATCGGACGTGTTGCACCTGTTGATTCAGGATTGTGGTGGATTATTCTGTTGAGAGCCTATGGAAAGATCACTGGTGACTATACATTACAAGAAAGGGTGGATGTCCAGACAGGCATAAGACTGATCCTTAATCTGTGTTTAACTGATGGATTTGACATGTTCCCTACCCTGCTAGTCACCGATGGTTCTTGTATGATTGACAGACGGATGGGTATTCATGGACACCCCCTTGAAATCCAAGCATTATTTTACTCAGCTCTACGCTGCTCCCGTGAAATGCTCATTGTCAACGATGGAACAAAAAATTTGGTGGCTGCAGTCAACAATCGACTTAGTGCACTTTCTTTTCACATCAGAGAGTACTATTGGGTGGACATGAAGAAGATCAATGAGATTTACCGTTATAAGACAGAGGAGTATTCTACAGACGCCATCAACAAGTTCAATATCTATCCAGATCAAATTCCTTCTTGGTTAGTAGACTGGATTCCTGAGGAAGGTGGTTACCTCATTGGCAATTTACAACCCGCCCATATGGATTTTAGGTTCTTCACTCTTGGAAATCTTTGGTCCATTGTATCATCTCTGGGAACCCAGAAACAGAATGAGGGTATATTGAATTTGATGGAGACCAAATGGGATGATTTCGTGGCCCAAATGCCTCTTAAGATCTGTTACCCTGCTCTGGAGTATGAAGAATGGCGTATAATTACTGGTGCTGACCCGAAGAATACGCCATGGTCATATCACAACGGTGGATCTTGGCCAACACTCCTATGGCAGTTTACATTGGCCTGCATCAAGATGAGAAAGACAGAATTAGCAGAAAAGGCAGTTGCCTTGGCAGAGAAGAGGCTTTCTATGGATCAGTGGCCTGAATATTATGATACAAAAAATGGGAGATTTATAGGCAAGCAATCCCGGCTTCACCAGACATGGACAATTGCCGGTTACCTAACTTCCAAAATGCTTTTGGAGAACCCCGAGAAGGCATCACTCTTGTTCTGGGAGGAGGATTATGAACTTCTTGAGACTTGTGTTTGTGCCCTCAACAAAACCAGTCGAAAGAAGTGTTCACGACGGTCTCAGATTCAGGTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004553 GO:0004564 GO:0004575 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005975 GO:0005984 GO:0005985 GO:0005987 GO:0007623 GO:0008150 GO:0008152 GO:0009056 GO:0009311 GO:0009313 GO:0009987 GO:0010029 GO:0015926 GO:0016052 GO:0016787 GO:0016798 GO:0040034 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044248 GO:0044262 GO:0044275 GO:0044424 GO:0044444 GO:0044464 GO:0046352 GO:0048506 GO:0048509 GO:0048510 GO:0048511 GO:0048580 GO:0050789 GO:0050793 GO:0051239 GO:0065007 GO:0071704 GO:0090599 GO:1900140 GO:1901575 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_hydro_100

Protein Analysis

666

Amino Acids

75.1

Weight (kDa)

5.59

Isoelectric Point (pI)

41.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_100	PF12899	187 - 628	6.5e-223	Alkaline and neutral invertase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0013939)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06500 AT3G06500
fragaria_vesca	FvH4_4g20740
malus_domestica	MD13G1148300.v1.1
prunus_persica	Prupe.1G111800_v2.0.a1
rosa_chinensis	RchiOBHm_Chr4g0426171
rosa_laevigata	RLG00000007313
rosa_multiflora	Rmu_co8515717.1_g000001 Rmu_sc0000730.1_g000012
rosa_roxburghii	Rroxscaffold_5G00368190
rosa_rugosa	Rorug04G0209400 Rorug04G0209400
rosa_samantha	Rh4AG266100 Rh4BG272200 Rh4CG285200 Rh4DG268300
rosa_wichuraiana	Rw4G023010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1305
AccBSI	CCGCTC	1 cut(s)	649
AccI	GTMKAC	2 cut(s)	780, 1380
AccII	CGCG	1 cut(s)	302
AciI	CCGC	2 cut(s)	647, 1428
AclWI	GGATC	6 cut(s)	173, 623, 872, 1018, 1666, 1773
AcoI	YGGCCR	2 cut(s)	897, 1664
AcsI	RAATTY	5 cut(s)	51, 860, 1204, 1362, 1519
AcyI	GRCGYC	2 cut(s)	644, 1329
AfaI	GTAC	3 cut(s)	164, 241, 1262
AfiI	CCNNNNNNNGG	6 cut(s)	800, 845, 887, 1397, 1585, 1888
AflII	CTTAAG	1 cut(s)	1565
AflIII	ACRYGT	2 cut(s)	907, 1056
AgsI	TTSAA	9 cut(s)	377, 388, 514, 551, 575, 823, 1133, 1345, 1519
AhlI	ACTAGT	1 cut(s)	242
AjiI	CACGTC	1 cut(s)	908
AjnI	CCWGG	2 cut(s)	560, 793
AleI	CACNNNNGTG	1 cut(s)	1653
AloI	GAACNNNNNNTCC	2 cut(s)	1430, 1462
AluBI	AGCT	6 cut(s)	78, 194, 719, 765, 819, 1157
AluI	AGCT	6 cut(s)	78, 194, 719, 765, 819, 1157
Alw21I	GWGCWC	1 cut(s)	1240
Alw26I	GTCTC	5 cut(s)	413, 559, 1523, 1925, 1989
Alw44I	GTGCAC	1 cut(s)	1236
AlwI	GGATC	6 cut(s)	173, 623, 872, 1018, 1666, 1773
Ama87I	CYCGRG	1 cut(s)	1883
AoxI	GGCC	7 cut(s)	38, 558, 897, 1551, 1664, 1692, 1772
ApaLI	GTGCAC	1 cut(s)	1236
ApeKI	GCWGC	3 cut(s)	620, 1164, 1214
ApoI	RAATTY	5 cut(s)	51, 860, 1204, 1362, 1519
AspLEI	GCGC	1 cut(s)	476
AspS9I	GGNCC	4 cut(s)	39, 101, 1470, 1552
AsuC2I	CCSGG	1 cut(s)	1822
AsuHPI	GGTGA	7 cut(s)	415, 443, 509, 902, 986, 1069, 1820
AvaI	CYCGRG	1 cut(s)	1883
AvaII	GGWCC	2 cut(s)	101, 1470
AxyI	CCTNAGG	1 cut(s)	1392
BaeGI	GKGCMC	2 cut(s)	1240, 1948
BaeI	ACNNNNGTAYC	2 cut(s)	154, 187
BalI	TGGCCA	1 cut(s)	1666
BbsI	GAAGAC	1 cut(s)	779
Bbv12I	GWGCWC	1 cut(s)	1240
BbvI	GCAGC	3 cut(s)	607, 1151, 1201
BciT130I	CCWGG	2 cut(s)	562, 795
BclI	TGATCA	1 cut(s)	658
BcnI	CCSGG	1 cut(s)	1822
BcoDI	GTCTC	5 cut(s)	413, 559, 1523, 1925, 1989
BcuI	ACTAGT	1 cut(s)	242
BfaI	CTAG	5 cut(s)	150, 243, 456, 1073, 1999
BfmI	CTRYAG	3 cut(s)	70, 1215, 1323
BfrI	CTTAAG	1 cut(s)	1565
BglII	AGATCT	1 cut(s)	1569
BisI	GCNGC	4 cut(s)	621, 647, 1165, 1215
BlsI	GCNGC	4 cut(s)	622, 648, 1166, 1216
BmcAI	AGTACT	1 cut(s)	1262
Bme1390I	CCNGG	3 cut(s)	562, 795, 1822
Bme18I	GGWCC	2 cut(s)	101, 1470
BmeT110I	CYCGRG	1 cut(s)	1883
BmgBI	CACGTC	1 cut(s)	908
BmgT120I	GGNCC	4 cut(s)	39, 101, 1470, 1552
BmiI	GGNNCC	3 cut(s)	102, 317, 1492
BmrFI	CCNGG	3 cut(s)	562, 795, 1822
BmsI	GCATC	4 cut(s)	106, 798, 1707, 1901
BpiI	GAAGAC	1 cut(s)	779
BpmI	CTGGAG	2 cut(s)	583, 1607
BpuEI	CTTGAG	1 cut(s)	1949
BpuMI	CCSGG	1 cut(s)	1822
BsaAI	YACGTR	1 cut(s)	170
BsaBI	GATNNNNATC	1 cut(s)	183
BsaHI	GRCGYC	2 cut(s)	644, 1329
BsaI	GGTCTC	2 cut(s)	1523, 1989
BsaJI	CCNNGG	7 cut(s)	81, 327, 504, 793, 794, 1637, 1740
BsaXI	ACNNNNNCTCC	2 cut(s)	62, 92
Bsc4I	CCNNNNNNNGG	6 cut(s)	800, 845, 887, 1397, 1585, 1888
Bse118I	RCCGGY	2 cut(s)	811, 1847
Bse1I	ACTGG	4 cut(s)	976, 1388, 1618, 1959
Bse21I	CCTNAGG	1 cut(s)	1392
Bse8I	GATNNNNATC	1 cut(s)	183
BseBI	CCWGG	2 cut(s)	562, 795
BseDI	CCNNGG	7 cut(s)	81, 327, 504, 793, 794, 1637, 1740
BseGI	GGATG	3 cut(s)	1006, 1113, 1546
BseJI	GATNNNNATC	1 cut(s)	183
BseLI	CCNNNNNNNGG	6 cut(s)	800, 845, 887, 1397, 1585, 1888
BseMII	CTCAG	5 cut(s)	110, 711, 1167, 1383, 2000
BseNI	ACTGG	4 cut(s)	976, 1388, 1618, 1959
BseRI	GAGGAG	4 cut(s)	70, 828, 1328, 1925
BseSI	GKGCMC	2 cut(s)	1240, 1948
BseXI	GCAGC	3 cut(s)	607, 1151, 1201
BseYI	CCCAGC	1 cut(s)	765
Bsh1236I	CGCG	1 cut(s)	302
BshFI	GGCC	7 cut(s)	40, 560, 899, 1553, 1666, 1694, 1774
BsiHKAI	GWGCWC	1 cut(s)	1240
BsiHKCI	CYCGRG	1 cut(s)	1883
BsiSI	CCGG	3 cut(s)	812, 1822, 1848
BslFI	GGGAC	2 cut(s)	114, 668
BslI	CCNNNNNNNGG	6 cut(s)	800, 845, 887, 1397, 1585, 1888
BsmAI	GTCTC	5 cut(s)	413, 559, 1523, 1925, 1989
BsmFI	GGGAC	2 cut(s)	114, 668
BsnI	GGCC	7 cut(s)	40, 560, 899, 1553, 1666, 1694, 1774
Bso31I	GGTCTC	2 cut(s)	1523, 1989
BsoBI	CYCGRG	1 cut(s)	1883
Bsp1286I	GDGCHC	2 cut(s)	1240, 1948
Bsp19I	CCATGG	1 cut(s)	1637
BspACI	CCGC	2 cut(s)	647, 1428
BspANI	GGCC	7 cut(s)	40, 560, 899, 1553, 1666, 1694, 1774
BspCNI	CTCAG	5 cut(s)	109, 712, 1166, 1384, 1999
BspFNI	CGCG	1 cut(s)	302
BspLI	GGNNCC	3 cut(s)	102, 317, 1492
BspMAI	CTGCAG	1 cut(s)	1219
BspPI	GGATC	6 cut(s)	173, 623, 872, 1018, 1666, 1773
BspTI	CTTAAG	1 cut(s)	1565
BspTNI	GGTCTC	2 cut(s)	1523, 1989
BsrBI	CCGCTC	1 cut(s)	649
BsrFI	RCCGGY	2 cut(s)	811, 1847
BsrI	ACTGG	4 cut(s)	976, 1388, 1618, 1959
BssAI	RCCGGY	2 cut(s)	811, 1847
BssECI	CCNNGG	7 cut(s)	81, 327, 504, 793, 794, 1637, 1740
BssNI	GRCGYC	2 cut(s)	644, 1329
BssT1I	CCWWGG	3 cut(s)	504, 1637, 1740
Bst2UI	CCWGG	2 cut(s)	562, 795
Bst4CI	ACNGT	6 cut(s)	526, 778, 785, 1301, 1655, 1983
Bst6I	CTCTTC	2 cut(s)	444, 1745
BstACI	GRCGYC	2 cut(s)	644, 1329
BstAFI	CTTAAG	1 cut(s)	1565
BstBAI	YACGTR	1 cut(s)	170
BstC8I	GCNNGC	4 cut(s)	813, 817, 1696, 1814
BstDEI	CTNAG	6 cut(s)	96, 720, 1153, 1232, 1392, 1986
BstDSI	CCRYGG	1 cut(s)	1637
BstEII	GGTNACC	2 cut(s)	1403, 1850
BstENI	CCTNNNNNAGG	2 cut(s)	798, 1395
BstF5I	GGATG	3 cut(s)	1006, 1113, 1546
BstFNI	CGCG	1 cut(s)	302
BstHHI	GCGC	1 cut(s)	476
BstMAI	GTCTC	5 cut(s)	413, 559, 1523, 1925, 1989
BstMWI	GCNNNNNNNGC	3 cut(s)	75, 1730, 1822
BstNI	CCWGG	2 cut(s)	562, 795
BstNSI	RCATGY	1 cut(s)	1060
BstPI	GGTNACC	2 cut(s)	1403, 1850
BstSCI	CCNGG	3 cut(s)	560, 793, 1820
BstSFI	CTRYAG	3 cut(s)	70, 1215, 1323
BstSLI	GKGCMC	2 cut(s)	1240, 1948
BstUI	CGCG	1 cut(s)	302
BstV1I	GCAGC	3 cut(s)	607, 1151, 1201
BstV2I	GAAGAC	1 cut(s)	779
BstX2I	RGATCY	3 cut(s)	877, 1569, 1658
BstYI	RGATCY	3 cut(s)	877, 1569, 1658
Bsu36I	CCTNAGG	1 cut(s)	1392
BsuRI	GGCC	7 cut(s)	40, 560, 899, 1553, 1666, 1694, 1774
BtgI	CCRYGG	1 cut(s)	1637
BtgZI	GCGATG	1 cut(s)	129
BtrI	CACGTC	1 cut(s)	908
BtsCI	GGATG	3 cut(s)	1006, 1113, 1546
BtsIMutI	CAGTG	2 cut(s)	969, 1775
Cac8I	GCNNGC	4 cut(s)	813, 817, 1696, 1814
CfoI	GCGC	1 cut(s)	476
Cfr10I	RCCGGY	2 cut(s)	811, 1847
Cfr13I	GGNCC	4 cut(s)	39, 101, 1470, 1552
CseI	GACGC	3 cut(s)	291, 652, 1337
Csp6I	GTAC	3 cut(s)	163, 240, 1261
CviAII	CATG	7 cut(s)	34, 428, 1057, 1118, 1276, 1638, 1836
CviQI	GTAC	3 cut(s)	163, 240, 1261
DdeI	CTNAG	6 cut(s)	96, 720, 1153, 1232, 1392, 1986
EaeI	YGGCCR	2 cut(s)	897, 1664
Eam1104I	CTCTTC	2 cut(s)	444, 1745
EarI	CTCTTC	2 cut(s)	444, 1745
Eco130I	CCWWGG	3 cut(s)	504, 1637, 1740
Eco147I	AGGCCT	1 cut(s)	560
Eco31I	GGTCTC	2 cut(s)	1523, 1989
Eco47I	GGWCC	2 cut(s)	101, 1470
Eco81I	CCTNAGG	1 cut(s)	1392
Eco88I	CYCGRG	1 cut(s)	1883
Eco91I	GGTNACC	2 cut(s)	1403, 1850
EcoNI	CCTNNNNNAGG	2 cut(s)	798, 1395
EcoO109I	RGGNCCY	1 cut(s)	39
EcoO65I	GGTNACC	2 cut(s)	1403, 1850
EcoRI	GAATTC	1 cut(s)	51
EcoRII	CCWGG	2 cut(s)	560, 793
EcoT14I	CCWWGG	3 cut(s)	504, 1637, 1740
ErhI	CCWWGG	3 cut(s)	504, 1637, 1740
FaeI	CATG	7 cut(s)	37, 431, 1060, 1121, 1279, 1641, 1839
FaqI	GGGAC	2 cut(s)	114, 668
FatI	CATG	7 cut(s)	33, 427, 1056, 1117, 1275, 1637, 1835
FauI	CCCGC	1 cut(s)	1435
FauNDI	CATATG	1 cut(s)	1434
FbaI	TGATCA	1 cut(s)	658
FblI	GTMKAC	2 cut(s)	780, 1380
Fnu4HI	GCNGC	4 cut(s)	621, 647, 1165, 1215
FokI	GGATG	3 cut(s)	1013, 1120, 1553
Fsp4HI	GCNGC	4 cut(s)	621, 647, 1165, 1215
FspBI	CTAG	5 cut(s)	150, 243, 456, 1073, 1999
GlaI	GCGC	1 cut(s)	475
GluI	GCNGC	4 cut(s)	621, 647, 1165, 1215
GsaI	CCCAGC	1 cut(s)	769
GsuI	CTGGAG	2 cut(s)	583, 1607
HaeIII	GGCC	7 cut(s)	40, 560, 899, 1553, 1666, 1694, 1774
HapII	CCGG	3 cut(s)	812, 1822, 1848
HgaI	GACGC	3 cut(s)	291, 652, 1337
HhaI	GCGC	1 cut(s)	476
Hin1I	GRCGYC	2 cut(s)	644, 1329
Hin1II	CATG	7 cut(s)	37, 431, 1060, 1121, 1279, 1641, 1839
Hin6I	GCGC	1 cut(s)	474
HinP1I	GCGC	1 cut(s)	474
HincII	GTYRAC	3 cut(s)	781, 1189, 1222
HindII	GTYRAC	3 cut(s)	781, 1189, 1222
HindIII	AAGCTT	1 cut(s)	817
HpaII	CCGG	3 cut(s)	812, 1822, 1848
HphI	GGTGA	7 cut(s)	415, 443, 509, 902, 986, 1069, 1820
Hpy166II	GTNNAC	8 cut(s)	781, 1189, 1222, 1238, 1273, 1381, 1686, 1976
Hpy188I	TCNGA	9 cut(s)	183, 189, 208, 214, 307, 544, 905, 1256, 1989
Hpy8I	GTNNAC	8 cut(s)	781, 1189, 1222, 1238, 1273, 1381, 1686, 1976
Hpy99I	CGWCG	2 cut(s)	307, 1983
HpyAV	CCTTC	4 cut(s)	268, 1377, 1391, 1882
HpyCH4III	ACNGT	6 cut(s)	526, 778, 785, 1301, 1655, 1983
HpyCH4IV	ACGT	2 cut(s)	169, 907
HpyCH4V	TGCA	8 cut(s)	119, 173, 394, 754, 914, 1217, 1238, 1698
HpyF10VI	GCNNNNNNNGC	3 cut(s)	75, 1730, 1822
HpyF3I	CTNAG	6 cut(s)	96, 720, 1153, 1232, 1392, 1986
HpySE526I	ACGT	2 cut(s)	169, 907
Hsp92I	GRCGYC	2 cut(s)	644, 1329
Hsp92II	CATG	7 cut(s)	37, 431, 1060, 1121, 1279, 1641, 1839
HspAI	GCGC	1 cut(s)	474
KroI	GCCGGC	1 cut(s)	811
KroNI	GCCGGC	1 cut(s)	813
Ksp22I	TGATCA	1 cut(s)	658
LmnI	GCTCC	3 cut(s)	83, 841, 1172
Lsp1109I	GCAGC	3 cut(s)	607, 1151, 1201
LweI	GCATC	4 cut(s)	106, 798, 1707, 1901
MaeI	CTAG	5 cut(s)	150, 243, 456, 1073, 1999
MaeII	ACGT	2 cut(s)	169, 907
MaeIII	GTNAC	6 cut(s)	756, 974, 1075, 1403, 1574, 1850
MbiI	CCGCTC	1 cut(s)	649
MboII	GAAGA	9 cut(s)	458, 461, 784, 1291, 1294, 1441, 1607, 1639, 1762
MfeI	CAATTG	3 cut(s)	13, 174, 1842
MflI	RGATCY	3 cut(s)	877, 1569, 1658
MhlI	GDGCHC	2 cut(s)	1240, 1948
MlsI	TGGCCA	1 cut(s)	1666
MluNI	TGGCCA	1 cut(s)	1666
MlyI	GAGTC	2 cut(s)	461, 512
MmeI	TCCRAC	2 cut(s)	285, 522
Mox20I	TGGCCA	1 cut(s)	1666
MroNI	GCCGGC	1 cut(s)	811
MscI	TGGCCA	1 cut(s)	1666
MseI	TTAA	6 cut(s)	198, 345, 468, 1029, 1040, 1566
MslI	CAYNNNNRTG	4 cut(s)	432, 1653, 1675, 1703
Msp20I	TGGCCA	1 cut(s)	1666
MspCI	CTTAAG	1 cut(s)	1565
MspI	CCGG	3 cut(s)	812, 1822, 1848
MspR9I	CCNGG	3 cut(s)	562, 795, 1822
MunI	CAATTG	3 cut(s)	13, 174, 1842
MvaI	CCWGG	2 cut(s)	562, 795
MvnI	CGCG	1 cut(s)	302
MwoI	GCNNNNNNNGC	3 cut(s)	75, 1730, 1822
NaeI	GCCGGC	1 cut(s)	813
NciI	CCSGG	1 cut(s)	1822
NcoI	CCATGG	1 cut(s)	1637
NdeI	CATATG	1 cut(s)	1434
NgoMIV	GCCGGC	1 cut(s)	811
NlaIII	CATG	7 cut(s)	37, 431, 1060, 1121, 1279, 1641, 1839
NlaIV	GGNNCC	3 cut(s)	102, 317, 1492
NmuCI	GTSAC	2 cut(s)	974, 1075
NspI	RCATGY	1 cut(s)	1060
OliI	CACNNNNGTG	1 cut(s)	1653
PasI	CCCWGGG	1 cut(s)	794
PceI	AGGCCT	1 cut(s)	560
PciI	ACATGT	1 cut(s)	1056
PcsI	WCGNNNNNNNCGW	1 cut(s)	1168
PdiI	GCCGGC	1 cut(s)	813
PkrI	GCNGC	4 cut(s)	622, 648, 1166, 1216
PleI	GAGTC	2 cut(s)	460, 512
PpsI	GAGTC	2 cut(s)	460, 512
Ppu21I	YACGTR	1 cut(s)	170
PscI	ACATGT	1 cut(s)	1056
PsiI	TTATAA	1 cut(s)	1305
Psp6I	CCWGG	2 cut(s)	560, 793
PspEI	GGTNACC	2 cut(s)	1403, 1850
PspFI	CCCAGC	1 cut(s)	765
PspGI	CCWGG	2 cut(s)	560, 793
PspN4I	GGNNCC	3 cut(s)	102, 317, 1492
PspPI	GGNCC	4 cut(s)	39, 101, 1470, 1552
PstI	CTGCAG	1 cut(s)	1219
PsuI	RGATCY	3 cut(s)	877, 1569, 1658
RsaI	GTAC	3 cut(s)	164, 241, 1262
RsaNI	GTAC	3 cut(s)	163, 240, 1261
RseI	CAYNNNNRTG	4 cut(s)	432, 1653, 1675, 1703
SalI	GTCGAC	1 cut(s)	779
SaqAI	TTAA	6 cut(s)	198, 345, 468, 1029, 1040, 1566
SatI	GCNGC	4 cut(s)	621, 647, 1165, 1215
Sau96I	GGNCC	4 cut(s)	39, 101, 1470, 1552
ScaI	AGTACT	1 cut(s)	1262
SchI	GAGTC	2 cut(s)	461, 512
ScrFI	CCNGG	3 cut(s)	562, 795, 1822
SduI	GDGCHC	2 cut(s)	1240, 1948
SfaNI	GCATC	4 cut(s)	106, 798, 1707, 1901
SfcI	CTRYAG	3 cut(s)	70, 1215, 1323
SinI	GGWCC	2 cut(s)	101, 1470
SmiMI	CAYNNNNRTG	4 cut(s)	432, 1653, 1675, 1703
SmlI	CTYRAG	2 cut(s)	1565, 1928
SmoI	CTYRAG	2 cut(s)	1565, 1928
SpeI	ACTAGT	1 cut(s)	242
SseBI	AGGCCT	1 cut(s)	560
SsiI	CCGC	2 cut(s)	647, 1428
SspI	AATATT	1 cut(s)	1781
SspMI	CTAG	5 cut(s)	150, 243, 456, 1073, 1999
StuI	AGGCCT	1 cut(s)	560
StyD4I	CCNGG	3 cut(s)	560, 793, 1820
StyI	CCWWGG	3 cut(s)	504, 1637, 1740
TaaI	ACNGT	6 cut(s)	526, 778, 785, 1301, 1655, 1983
TaiI	ACGT	2 cut(s)	172, 910
TaqI	TCGA	7 cut(s)	137, 323, 588, 673, 780, 1228, 1963
TaqII	GACCGA	2 cut(s)	118, 216
TatI	WGTACW	2 cut(s)	239, 1260
TauI	GCSGC	1 cut(s)	649
Tru1I	TTAA	6 cut(s)	198, 345, 468, 1029, 1040, 1566
Tru9I	TTAA	6 cut(s)	198, 345, 468, 1029, 1040, 1566
TscAI	CASTG	2 cut(s)	976, 1775
TseFI	GTSAC	2 cut(s)	974, 1075
TseI	GCWGC	3 cut(s)	620, 1164, 1214
Tsp45I	GTSAC	2 cut(s)	974, 1075
TspDTI	ATGAA	4 cut(s)	1106, 1292, 1608, 1935
TspGWI	ACGGA	1 cut(s)	1120
TspRI	CASTG	2 cut(s)	976, 1775
Vha464I	CTTAAG	1 cut(s)	1565
VneI	GTGCAC	1 cut(s)	1236
VpaK11BI	GGWCC	2 cut(s)	101, 1470
XagI	CCTNNNNNAGG	2 cut(s)	798, 1395
XapI	RAATTY	5 cut(s)	51, 860, 1204, 1362, 1519
XceI	RCATGY	1 cut(s)	1060
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1674, 1870
XmiI	GTMKAC	2 cut(s)	780, 1380
XspI	CTAG	5 cut(s)	150, 243, 456, 1073, 1999
ZrmI	AGTACT	1 cut(s)	1262

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.