Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0013939

Physical Location & Seq

Genomic Coordinates Reverse (-)

48540522 .. 48545115

Gene Structure 4594 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G023010.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2007 bp

ATGAGCAGTAGCAATTGTATTGGAATCTGTGGCATGAGGCCCTGTTGTAGAATTCTAATGGGCTATGGCTACAGAAGCTCCTCGGTTTTCGGTTCTCAGGGACCGAAATTGAGCGATGCAGTCGTTGACAATTTGTCGAAATTACGATCTAGGACTTTAGGGTACATACGTGCAATTGATCCGAATCGGAGAGGTTTTAATGTTTCCGATTCGGATTGGGGTCATCGGCCTGGGGTTTGTACTAGTGGTGTAAATAGAGTTGGTAATGGTAGTAAGAGGGGTGTTTCAGTGATAAGGAATGTCGCGTCAGATTTTAGGAACCACTCGACCTCCTCGGTGGATAGTCAGGTTAATGGGAAGTCGTTTGAGAGTATTTATATTCAAGGTGGCTTGAATATGCAACCTTTGGTGATAGAGAGGATTGAGACAGGTCATGGTGATGTGGTCAAAGAAGAAGAGTCTAGGTTAGAGGTTAATGGCGCAAATGTAAATGTAAATATAGGTGATTCCAAGGGTTTGAATGACTCCAAAGTTGAGAGAGAGTTGTCAGAAATTGAAAAGGAGGCCTGGAGACTGCTTCAAGATTCAGTCGTCGATTATTGTGGGAATCCGGTGGGAACTCTTGCTGCTATTGATCCAGCAGACAAGACGCCGCTCAATTATGATCAGGTCTTTATTCGAGATTTCGTCCCATCGGCACTTGCTTTCTTGCTCAATGGAGAAGCTGAGATTGTCAAGAACTTTCTGCTTCACACTTTGCAGTTACAGAGCTGGGAGAAGACAGTCGACTGTTATAGCCCTGGGCAAGGGTTGATGCCAGCAAGCTTCAAAGTTAGGACTGCTCCTCTTGATGGAACTGATGGAAAATTTGAGGAAGTTTTAGATCCTGATTTTGGTGAATCGGCCATCGGACGTGTTGCACCTGTTGATTCTGGATTGTGGTGGATTATTCTGTTGAGAGCCTATGGAAAGATCACTGGTGACTATACATTACAAGAAAGGGTGGATGTCCAGACTGGCATAAGACTGATCCTTAATCTGTGTTTAACTGATGGATTTGACATGTTTCCTACCCTGCTAGTCACCGATGGTTCTTGTATGATTGACAGACGGATGGGTATTCATGGACACCCCCTTGAAATCCAAGCATTATTTTACTCAGCTCTACGCTGCTCCCGTGAAATGCTCATTGTCAACGATGGAACAAAAAATTTGGTGGCTGCAGTCAACAATCGACTTAGTGCACTTTCTTTTCACATTAGAGAGTACTATTGGGTGGACATGAAGAAGATCAATGAGATTTACCGTTATAAGACAGAGGAGTATTCTACAGATGCCATCAACAAGTTCAATATCTATCCAGATCAAATTCCTTCTTGGTTAGTAGACTGGATTCCTGAGGAAGGTGGTTATCTCATTGGCAATTTACAACCCGCCCATATGGATTTTAGGTTCTTCACTCTTGGAAATCTTTGGTCCATTGTATCGTCTCTGGGAACCCAGAAACAGAATGAGGGTATATTGAATTTGATGGAGACCAAATGGGATGATTTCGTGGCCCAAATGCCTCTTAAGATCTGTTACCCTGCTCTGGAGTATGAAGAATGGCGTATAATTACTGGTGCTGACCCAAAGAATACGCCATGGTCATATCACAATGGCGGATCATGGCCAACACTCCTATGGCAGTTTACATTGGCCTGCATCAAGATGGGAAAGACAGAATTAGCAGAAAAGGCAGTTGCCTTGGCAGAGAAGAGGCTTTCTATGGATCAGTGGCCTGAATATTATGATACAAAAAATGGGAGATTTATAGGCAAGCAATCCCGGCTTCACCAGACATGGACAATTGCCGGTTACCTAACTTCCAAAATGCTTTTGGAGAACCCCGAGAAGGCATCACTCTTGTTCTGGGAGGAGGATTATGAACTTCTTGAGACTTGTGTTTGTGCCCTCAACAAAACCAGTCGAAAGAAGTGTTCACGACGGTCTCAGATTCAGGTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004553 GO:0004564 GO:0004575 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005975 GO:0005984 GO:0005985 GO:0005987 GO:0007623 GO:0008150 GO:0008152 GO:0009056 GO:0009311 GO:0009313 GO:0009987 GO:0010029 GO:0015926 GO:0016052 GO:0016787 GO:0016798 GO:0040034 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044248 GO:0044262 GO:0044275 GO:0044424 GO:0044444 GO:0044464 GO:0046352 GO:0048506 GO:0048509 GO:0048510 GO:0048511 GO:0048580 GO:0050789 GO:0050793 GO:0051239 GO:0065007 GO:0071704 GO:0090599 GO:1900140 GO:1901575 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_hydro_100

Protein Analysis

668

Amino Acids

75.29

Weight (kDa)

5.67

Isoelectric Point (pI)

40.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_100	PF12899	189 - 630	3.5e-223	Alkaline and neutral invertase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0013939)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06500 AT3G06500
fragaria_vesca	FvH4_4g20740
malus_domestica	MD13G1148300.v1.1
prunus_persica	Prupe.1G111800_v2.0.a1
rosa_chinensis	RchiOBHm_Chr4g0426171
rosa_laevigata	RLG00000007313
rosa_multiflora	Rmu_co8515717.1_g000001 Rmu_sc0000730.1_g000012
rosa_roxburghii	Rroxscaffold_5G00368190
rosa_rugosa	Rorug04G0209400 Rorug04G0209400
rosa_samantha	Rh4AG266100 Rh4BG272200 Rh4CG285200 Rh4DG268300
rosa_wichuraiana	Rw4G023010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1311
AccBSI	CCGCTC	1 cut(s)	655
AccI	GTMKAC	2 cut(s)	786, 1386
AccII	CGCG	1 cut(s)	305
AciI	CCGC	3 cut(s)	653, 1434, 1662
AclWI	GGATC	6 cut(s)	173, 629, 878, 1024, 1672, 1779
AcoI	YGGCCR	2 cut(s)	903, 1670
AcsI	RAATTY	5 cut(s)	51, 866, 1210, 1368, 1525
AcyI	GRCGYC	1 cut(s)	650
AfaI	GTAC	3 cut(s)	164, 241, 1268
AfiI	CCNNNNNNNGG	6 cut(s)	806, 851, 893, 1403, 1591, 1894
AflII	CTTAAG	1 cut(s)	1571
AflIII	ACRYGT	2 cut(s)	913, 1062
AgsI	TTSAA	9 cut(s)	383, 394, 520, 557, 581, 829, 1139, 1351, 1525
AhdI	GACNNNNNGTC	1 cut(s)	133
AhlI	ACTAGT	1 cut(s)	242
AjiI	CACGTC	1 cut(s)	914
AjnI	CCWGG	3 cut(s)	229, 566, 799
AloI	GAACNNNNNNTCC	2 cut(s)	1436, 1468
AluBI	AGCT	5 cut(s)	78, 725, 771, 825, 1163
AluI	AGCT	5 cut(s)	78, 725, 771, 825, 1163
Alw21I	GWGCWC	1 cut(s)	1246
Alw26I	GTCTC	6 cut(s)	419, 565, 1494, 1529, 1931, 1995
Alw44I	GTGCAC	1 cut(s)	1242
AlwI	GGATC	6 cut(s)	173, 629, 878, 1024, 1672, 1779
Ama87I	CYCGRG	1 cut(s)	1889
AoxI	GGCC	8 cut(s)	38, 227, 564, 903, 1557, 1670, 1698, 1778
ApaLI	GTGCAC	1 cut(s)	1242
ApeKI	GCWGC	3 cut(s)	626, 1170, 1220
ApoI	RAATTY	5 cut(s)	51, 866, 1210, 1368, 1525
AspLEI	GCGC	1 cut(s)	482
AspS9I	GGNCC	4 cut(s)	39, 101, 1476, 1558
AsuC2I	CCSGG	1 cut(s)	1828
AsuHPI	GGTGA	7 cut(s)	421, 449, 515, 908, 992, 1075, 1826
AvaI	CYCGRG	1 cut(s)	1889
AvaII	GGWCC	2 cut(s)	101, 1476
AxyI	CCTNAGG	1 cut(s)	1398
BaeGI	GKGCMC	2 cut(s)	1246, 1954
BaeI	ACNNNNGTAYC	2 cut(s)	154, 187
BalI	TGGCCA	1 cut(s)	1672
BbsI	GAAGAC	1 cut(s)	785
Bbv12I	GWGCWC	1 cut(s)	1246
BbvI	GCAGC	3 cut(s)	613, 1157, 1207
BciT130I	CCWGG	3 cut(s)	231, 568, 801
BclI	TGATCA	1 cut(s)	664
BcnI	CCSGG	1 cut(s)	1828
BcoDI	GTCTC	6 cut(s)	419, 565, 1494, 1529, 1931, 1995
BcuI	ACTAGT	1 cut(s)	242
BfaI	CTAG	5 cut(s)	150, 243, 462, 1079, 2005
BfmI	CTRYAG	3 cut(s)	70, 1221, 1329
BfrI	CTTAAG	1 cut(s)	1571
BglII	AGATCT	1 cut(s)	1575
BisI	GCNGC	4 cut(s)	627, 653, 1171, 1221
BlsI	GCNGC	4 cut(s)	628, 654, 1172, 1222
BmcAI	AGTACT	1 cut(s)	1268
Bme1390I	CCNGG	4 cut(s)	231, 568, 801, 1828
Bme18I	GGWCC	2 cut(s)	101, 1476
BmeRI	GACNNNNNGTC	1 cut(s)	133
BmeT110I	CYCGRG	1 cut(s)	1889
BmgBI	CACGTC	1 cut(s)	914
BmgT120I	GGNCC	4 cut(s)	39, 101, 1476, 1558
BmiI	GGNNCC	3 cut(s)	102, 320, 1498
BmrFI	CCNGG	4 cut(s)	231, 568, 801, 1828
BmsI	GCATC	5 cut(s)	106, 804, 1324, 1713, 1907
BpiI	GAAGAC	1 cut(s)	785
BpmI	CTGGAG	2 cut(s)	589, 1613
BpuEI	CTTGAG	1 cut(s)	1955
BpuMI	CCSGG	1 cut(s)	1828
BsaAI	YACGTR	1 cut(s)	170
BsaBI	GATNNNNATC	1 cut(s)	183
BsaHI	GRCGYC	1 cut(s)	650
BsaI	GGTCTC	2 cut(s)	1529, 1995
BsaJI	CCNNGG	8 cut(s)	81, 230, 333, 510, 799, 800, 1643, 1746
BsaWI	WCCGGW	1 cut(s)	610
BsaXI	ACNNNNNCTCC	4 cut(s)	62, 92, 314, 344
Bsc4I	CCNNNNNNNGG	6 cut(s)	806, 851, 893, 1403, 1591, 1894
Bse118I	RCCGGY	1 cut(s)	1853
Bse1I	ACTGG	5 cut(s)	982, 1021, 1394, 1624, 1965
Bse21I	CCTNAGG	1 cut(s)	1398
Bse8I	GATNNNNATC	1 cut(s)	183
BseBI	CCWGG	3 cut(s)	231, 568, 801
BseDI	CCNNGG	8 cut(s)	81, 230, 333, 510, 799, 800, 1643, 1746
BseGI	GGATG	3 cut(s)	1012, 1119, 1552
BseJI	GATNNNNATC	1 cut(s)	183
BseLI	CCNNNNNNNGG	6 cut(s)	806, 851, 893, 1403, 1591, 1894
BseMII	CTCAG	5 cut(s)	110, 717, 1173, 1389, 2006
BseNI	ACTGG	5 cut(s)	982, 1021, 1394, 1624, 1965
BseRI	GAGGAG	5 cut(s)	70, 322, 834, 1334, 1931
BseSI	GKGCMC	2 cut(s)	1246, 1954
BseXI	GCAGC	3 cut(s)	613, 1157, 1207
BseYI	CCCAGC	1 cut(s)	771
Bsh1236I	CGCG	1 cut(s)	305
BshFI	GGCC	8 cut(s)	40, 229, 566, 905, 1559, 1672, 1700, 1780
BsiHKAI	GWGCWC	1 cut(s)	1246
BsiHKCI	CYCGRG	1 cut(s)	1889
BsiSI	CCGG	3 cut(s)	611, 1828, 1854
BslFI	GGGAC	2 cut(s)	114, 674
BslI	CCNNNNNNNGG	6 cut(s)	806, 851, 893, 1403, 1591, 1894
BsmAI	GTCTC	6 cut(s)	419, 565, 1494, 1529, 1931, 1995
BsmBI	CGTCTC	1 cut(s)	1494
BsmFI	GGGAC	2 cut(s)	114, 674
BsnI	GGCC	8 cut(s)	40, 229, 566, 905, 1559, 1672, 1700, 1780
Bso31I	GGTCTC	2 cut(s)	1529, 1995
BsoBI	CYCGRG	1 cut(s)	1889
Bsp1286I	GDGCHC	2 cut(s)	1246, 1954
Bsp19I	CCATGG	1 cut(s)	1643
BspACI	CCGC	3 cut(s)	653, 1434, 1662
BspANI	GGCC	8 cut(s)	40, 229, 566, 905, 1559, 1672, 1700, 1780
BspCNI	CTCAG	5 cut(s)	109, 718, 1172, 1390, 2005
BspFNI	CGCG	1 cut(s)	305
BspLI	GGNNCC	3 cut(s)	102, 320, 1498
BspMAI	CTGCAG	1 cut(s)	1225
BspPI	GGATC	6 cut(s)	173, 629, 878, 1024, 1672, 1779
BspTI	CTTAAG	1 cut(s)	1571
BspTNI	GGTCTC	2 cut(s)	1529, 1995
BsrBI	CCGCTC	1 cut(s)	655
BsrFI	RCCGGY	1 cut(s)	1853
BsrI	ACTGG	5 cut(s)	982, 1021, 1394, 1624, 1965
BssAI	RCCGGY	1 cut(s)	1853
BssECI	CCNNGG	8 cut(s)	81, 230, 333, 510, 799, 800, 1643, 1746
BssNI	GRCGYC	1 cut(s)	650
BssT1I	CCWWGG	3 cut(s)	510, 1643, 1746
Bst2UI	CCWGG	3 cut(s)	231, 568, 801
Bst4CI	ACNGT	4 cut(s)	784, 791, 1307, 1989
Bst6I	CTCTTC	2 cut(s)	450, 1751
BstACI	GRCGYC	1 cut(s)	650
BstAFI	CTTAAG	1 cut(s)	1571
BstBAI	YACGTR	1 cut(s)	170
BstC8I	GCNNGC	4 cut(s)	819, 823, 1702, 1820
BstDEI	CTNAG	6 cut(s)	96, 726, 1159, 1238, 1398, 1992
BstDSI	CCRYGG	1 cut(s)	1643
BstEII	GGTNACC	1 cut(s)	1856
BstENI	CCTNNNNNAGG	2 cut(s)	804, 1401
BstF5I	GGATG	3 cut(s)	1012, 1119, 1552
BstFNI	CGCG	1 cut(s)	305
BstHHI	GCGC	1 cut(s)	482
BstMAI	GTCTC	6 cut(s)	419, 565, 1494, 1529, 1931, 1995
BstMWI	GCNNNNNNNGC	3 cut(s)	75, 1736, 1828
BstNI	CCWGG	3 cut(s)	231, 568, 801
BstNSI	RCATGY	1 cut(s)	1066
BstPI	GGTNACC	1 cut(s)	1856
BstSCI	CCNGG	4 cut(s)	229, 566, 799, 1826
BstSFI	CTRYAG	3 cut(s)	70, 1221, 1329
BstSLI	GKGCMC	2 cut(s)	1246, 1954
BstUI	CGCG	1 cut(s)	305
BstV1I	GCAGC	3 cut(s)	613, 1157, 1207
BstV2I	GAAGAC	1 cut(s)	785
BstX2I	RGATCY	2 cut(s)	883, 1575
BstYI	RGATCY	2 cut(s)	883, 1575
Bsu36I	CCTNAGG	1 cut(s)	1398
BsuRI	GGCC	8 cut(s)	40, 229, 566, 905, 1559, 1672, 1700, 1780
BtgI	CCRYGG	1 cut(s)	1643
BtgZI	GCGATG	1 cut(s)	129
BtrI	CACGTC	1 cut(s)	914
BtsCI	GGATG	3 cut(s)	1012, 1119, 1552
BtsIMutI	CAGTG	3 cut(s)	294, 975, 1781
Cac8I	GCNNGC	4 cut(s)	819, 823, 1702, 1820
CfoI	GCGC	1 cut(s)	482
Cfr10I	RCCGGY	1 cut(s)	1853
Cfr13I	GGNCC	4 cut(s)	39, 101, 1476, 1558
CseI	GACGC	2 cut(s)	294, 658
Csp6I	GTAC	3 cut(s)	163, 240, 1267
CviAII	CATG	8 cut(s)	34, 434, 1063, 1124, 1282, 1644, 1668, 1842
CviQI	GTAC	3 cut(s)	163, 240, 1267
DdeI	CTNAG	6 cut(s)	96, 726, 1159, 1238, 1398, 1992
DriI	GACNNNNNGTC	1 cut(s)	133
EaeI	YGGCCR	2 cut(s)	903, 1670
Eam1104I	CTCTTC	2 cut(s)	450, 1751
Eam1105I	GACNNNNNGTC	1 cut(s)	133
EarI	CTCTTC	2 cut(s)	450, 1751
EciI	GGCGGA	1 cut(s)	1677
Eco130I	CCWWGG	3 cut(s)	510, 1643, 1746
Eco147I	AGGCCT	1 cut(s)	566
Eco31I	GGTCTC	2 cut(s)	1529, 1995
Eco47I	GGWCC	2 cut(s)	101, 1476
Eco81I	CCTNAGG	1 cut(s)	1398
Eco88I	CYCGRG	1 cut(s)	1889
Eco91I	GGTNACC	1 cut(s)	1856
EcoNI	CCTNNNNNAGG	2 cut(s)	804, 1401
EcoO109I	RGGNCCY	1 cut(s)	39
EcoO65I	GGTNACC	1 cut(s)	1856
EcoRI	GAATTC	1 cut(s)	51
EcoRII	CCWGG	3 cut(s)	229, 566, 799
EcoT14I	CCWWGG	3 cut(s)	510, 1643, 1746
ErhI	CCWWGG	3 cut(s)	510, 1643, 1746
Esp3I	CGTCTC	1 cut(s)	1494
FaeI	CATG	8 cut(s)	37, 437, 1066, 1127, 1285, 1647, 1671, 1845
FaqI	GGGAC	2 cut(s)	114, 674
FatI	CATG	8 cut(s)	33, 433, 1062, 1123, 1281, 1643, 1667, 1841
FauI	CCCGC	1 cut(s)	1441
FauNDI	CATATG	1 cut(s)	1440
FbaI	TGATCA	1 cut(s)	664
FblI	GTMKAC	2 cut(s)	786, 1386
Fnu4HI	GCNGC	4 cut(s)	627, 653, 1171, 1221
FokI	GGATG	3 cut(s)	1019, 1126, 1559
Fsp4HI	GCNGC	4 cut(s)	627, 653, 1171, 1221
FspBI	CTAG	5 cut(s)	150, 243, 462, 1079, 2005
GlaI	GCGC	1 cut(s)	481
GluI	GCNGC	4 cut(s)	627, 653, 1171, 1221
GsaI	CCCAGC	1 cut(s)	775
GsuI	CTGGAG	2 cut(s)	589, 1613
HaeIII	GGCC	8 cut(s)	40, 229, 566, 905, 1559, 1672, 1700, 1780
HapII	CCGG	3 cut(s)	611, 1828, 1854
HgaI	GACGC	2 cut(s)	294, 658
HhaI	GCGC	1 cut(s)	482
Hin1I	GRCGYC	1 cut(s)	650
Hin1II	CATG	8 cut(s)	37, 437, 1066, 1127, 1285, 1647, 1671, 1845
Hin6I	GCGC	1 cut(s)	480
HinP1I	GCGC	1 cut(s)	480
HincII	GTYRAC	4 cut(s)	127, 787, 1195, 1228
HindII	GTYRAC	4 cut(s)	127, 787, 1195, 1228
HindIII	AAGCTT	1 cut(s)	823
HpaII	CCGG	3 cut(s)	611, 1828, 1854
HphI	GGTGA	7 cut(s)	421, 449, 515, 908, 992, 1075, 1826
Hpy166II	GTNNAC	9 cut(s)	127, 787, 1195, 1228, 1244, 1279, 1387, 1692, 1982
Hpy188I	TCNGA	8 cut(s)	183, 189, 208, 214, 310, 550, 911, 1995
Hpy8I	GTNNAC	9 cut(s)	127, 787, 1195, 1228, 1244, 1279, 1387, 1692, 1982
Hpy99I	CGWCG	2 cut(s)	596, 1989
HpyAV	CCTTC	3 cut(s)	1383, 1397, 1888
HpyCH4III	ACNGT	4 cut(s)	784, 791, 1307, 1989
HpyCH4IV	ACGT	2 cut(s)	169, 913
HpyCH4V	TGCA	8 cut(s)	119, 173, 400, 760, 920, 1223, 1244, 1704
HpyF10VI	GCNNNNNNNGC	3 cut(s)	75, 1736, 1828
HpyF3I	CTNAG	6 cut(s)	96, 726, 1159, 1238, 1398, 1992
HpySE526I	ACGT	2 cut(s)	169, 913
Hsp92I	GRCGYC	1 cut(s)	650
Hsp92II	CATG	8 cut(s)	37, 437, 1066, 1127, 1285, 1647, 1671, 1845
HspAI	GCGC	1 cut(s)	480
Ksp22I	TGATCA	1 cut(s)	664
LmnI	GCTCC	3 cut(s)	83, 847, 1178
Lsp1109I	GCAGC	3 cut(s)	613, 1157, 1207
LweI	GCATC	5 cut(s)	106, 804, 1324, 1713, 1907
MaeI	CTAG	5 cut(s)	150, 243, 462, 1079, 2005
MaeII	ACGT	2 cut(s)	169, 913
MaeIII	GTNAC	5 cut(s)	762, 980, 1081, 1580, 1856
MbiI	CCGCTC	1 cut(s)	655
MboII	GAAGA	8 cut(s)	464, 467, 790, 1297, 1300, 1447, 1613, 1768
MfeI	CAATTG	3 cut(s)	13, 174, 1848
MflI	RGATCY	2 cut(s)	883, 1575
MhlI	GDGCHC	2 cut(s)	1246, 1954
MlsI	TGGCCA	1 cut(s)	1672
MluNI	TGGCCA	1 cut(s)	1672
MlyI	GAGTC	2 cut(s)	467, 518
Mox20I	TGGCCA	1 cut(s)	1672
MscI	TGGCCA	1 cut(s)	1672
MseI	TTAA	6 cut(s)	198, 351, 474, 1035, 1046, 1572
MslI	CAYNNNNRTG	3 cut(s)	438, 1681, 1709
Msp20I	TGGCCA	1 cut(s)	1672
MspCI	CTTAAG	1 cut(s)	1571
MspI	CCGG	3 cut(s)	611, 1828, 1854
MspR9I	CCNGG	4 cut(s)	231, 568, 801, 1828
MunI	CAATTG	3 cut(s)	13, 174, 1848
MvaI	CCWGG	3 cut(s)	231, 568, 801
MvnI	CGCG	1 cut(s)	305
MwoI	GCNNNNNNNGC	3 cut(s)	75, 1736, 1828
NciI	CCSGG	1 cut(s)	1828
NcoI	CCATGG	1 cut(s)	1643
NdeI	CATATG	1 cut(s)	1440
NlaIII	CATG	8 cut(s)	37, 437, 1066, 1127, 1285, 1647, 1671, 1845
NlaIV	GGNNCC	3 cut(s)	102, 320, 1498
NmuCI	GTSAC	2 cut(s)	980, 1081
NspI	RCATGY	1 cut(s)	1066
PasI	CCCWGGG	1 cut(s)	800
PceI	AGGCCT	1 cut(s)	566
PciI	ACATGT	1 cut(s)	1062
PcsI	WCGNNNNNNNCGW	1 cut(s)	1174
PkrI	GCNGC	4 cut(s)	628, 654, 1172, 1222
PleI	GAGTC	2 cut(s)	466, 518
PpsI	GAGTC	2 cut(s)	466, 518
Ppu21I	YACGTR	1 cut(s)	170
PscI	ACATGT	1 cut(s)	1062
PsiI	TTATAA	1 cut(s)	1311
Psp6I	CCWGG	3 cut(s)	229, 566, 799
PspEI	GGTNACC	1 cut(s)	1856
PspFI	CCCAGC	1 cut(s)	771
PspGI	CCWGG	3 cut(s)	229, 566, 799
PspN4I	GGNNCC	3 cut(s)	102, 320, 1498
PspPI	GGNCC	4 cut(s)	39, 101, 1476, 1558
PstI	CTGCAG	1 cut(s)	1225
PsuI	RGATCY	2 cut(s)	883, 1575
RsaI	GTAC	3 cut(s)	164, 241, 1268
RsaNI	GTAC	3 cut(s)	163, 240, 1267
RseI	CAYNNNNRTG	3 cut(s)	438, 1681, 1709
SalI	GTCGAC	1 cut(s)	785
SaqAI	TTAA	6 cut(s)	198, 351, 474, 1035, 1046, 1572
SatI	GCNGC	4 cut(s)	627, 653, 1171, 1221
Sau96I	GGNCC	4 cut(s)	39, 101, 1476, 1558
ScaI	AGTACT	1 cut(s)	1268
SchI	GAGTC	2 cut(s)	467, 518
ScrFI	CCNGG	4 cut(s)	231, 568, 801, 1828
SduI	GDGCHC	2 cut(s)	1246, 1954
SfaNI	GCATC	5 cut(s)	106, 804, 1324, 1713, 1907
SfcI	CTRYAG	3 cut(s)	70, 1221, 1329
SinI	GGWCC	2 cut(s)	101, 1476
SmiMI	CAYNNNNRTG	3 cut(s)	438, 1681, 1709
SmlI	CTYRAG	2 cut(s)	1571, 1934
SmoI	CTYRAG	2 cut(s)	1571, 1934
SpeI	ACTAGT	1 cut(s)	242
SseBI	AGGCCT	1 cut(s)	566
SsiI	CCGC	3 cut(s)	653, 1434, 1662
SspI	AATATT	1 cut(s)	1787
SspMI	CTAG	5 cut(s)	150, 243, 462, 1079, 2005
StuI	AGGCCT	1 cut(s)	566
StyD4I	CCNGG	4 cut(s)	229, 566, 799, 1826
StyI	CCWWGG	3 cut(s)	510, 1643, 1746
TaaI	ACNGT	4 cut(s)	784, 791, 1307, 1989
TaiI	ACGT	2 cut(s)	172, 916
TaqI	TCGA	7 cut(s)	137, 326, 594, 679, 786, 1234, 1969
TaqII	GACCGA	1 cut(s)	118
TatI	WGTACW	2 cut(s)	239, 1266
TauI	GCSGC	1 cut(s)	655
Tru1I	TTAA	6 cut(s)	198, 351, 474, 1035, 1046, 1572
Tru9I	TTAA	6 cut(s)	198, 351, 474, 1035, 1046, 1572
TscAI	CASTG	3 cut(s)	294, 982, 1781
TseFI	GTSAC	2 cut(s)	980, 1081
TseI	GCWGC	3 cut(s)	626, 1170, 1220
Tsp45I	GTSAC	2 cut(s)	980, 1081
TspDTI	ATGAA	4 cut(s)	1112, 1298, 1614, 1941
TspGWI	ACGGA	1 cut(s)	1126
TspRI	CASTG	3 cut(s)	294, 982, 1781
Vha464I	CTTAAG	1 cut(s)	1571
VneI	GTGCAC	1 cut(s)	1242
VpaK11BI	GGWCC	2 cut(s)	101, 1476
XagI	CCTNNNNNAGG	2 cut(s)	804, 1401
XapI	RAATTY	5 cut(s)	51, 866, 1210, 1368, 1525
XceI	RCATGY	1 cut(s)	1066
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1680, 1876
XmiI	GTMKAC	2 cut(s)	786, 1386
XspI	CTAG	5 cut(s)	150, 243, 462, 1079, 2005
ZrmI	AGTACT	1 cut(s)	1268

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.