Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0008084

Physical Location & Seq

Genomic Coordinates Forward (+)

55841530 .. 55845176

Gene Structure 3647 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00374920.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1791 bp

ATGAAATCTCTTCTCTATCCACACCCTCTTTCTCTCACCTCCATCTCCACCGCCAAACCCCAACAGCTCACTCTCTCCCACACTCGAACATTCCTCAAACTCCCGGTCAATCACGGCGACCGTTCCGCCGTTAGAAACCCAGCTCTGACCGTCAGAGCCGCTCTCGACTCCGTTACGGTTAACCAATCCGGAATTTCATTGCCGGATGCCAGAAATCCAACGGTTTCTTCTTCTTATAGAGACTCCAATTTGCCGAGGCCGAATCCGACGGTGCTGGAAGCTCAGACTAGGGTTTGCACCGGCCCTACCCAGACCAAGCCTCTCGGCGAGGACCAGGCGATGAAGGTACTCGACACCATTCTCAGATCAGCCACCGGAGAGCTGAAGAATGAGGAGCCAGTCTCCAAGGCGCAGCTCGGAGCGTTCTTCGCCGCCATGACGATTCGCGCCAATTGTTTCCCGGAGGCGACGCAATGGAGCGAAGGCGAGACGCGAGCGATGGACAAGTACTGGCCGCTTCTGGTCCGGGCGCTGCCGCCGGACGTGGTGTTCATCGCCGACCCGGAGGGGTCGTTGATGGGGATAGGAAGCTCGATCGGGCCGCAATTCGTTGGGAACGGGACGAGTGATATGAGATTGGTCGGGGCTCTCCGGGAGGTCTTGGCCGGCGGCCACCTCGGGTATGAGGAAGTGCAAGGTGTTTTGAAAGACGTTTTGCCGTTGAAATCGACGACGGAGGATGGGACGTCGGCCGGAGTAAGTGAATCATTGCTTTCGGCATTGTTAATAGGTCAGCGTATGAACAGAGAAACAGACCGTGAATTAAAAGCTTACTGCCTTGCATTTGATGATGAACTTGGTGAAACTCCGATTGCTGATGTGAAATCGCTAACTCACTATGGCGAACCTTATGATGGAAACACTCGTTTCTTTCGTAGCACATTGTTTGTTGCTGCGGTTAGGTCTTGTTATGCTGAATCATCCCTGCTTCATGGTGCTGAATGGATGCCTCCAAAGGGAGGTGTTACTGAAGAACAAATGCTCAAGTTCATGGGAGCAGATACGAGCTTGACCCCGTCGCAGGCAAAAGTACTTCTAGAGATATTCATTATTAAAGTTGAGGGAGCATATCAAGAAACGCCCCCACTGGCAACATCTGAGAAGGTTCAGCAATTTGTGAAGACCCGGGGGAAGGAAGCAATTGTCACGGGATTTTATCATGAAGGTTATGAGGATTCACTCTTAATGCTTATGAAAAGAAGAGGTGTTCATTCTGGCTTGGTGGTGAAGGGTGAGGAAGGGGCCCTCTCAATGACAACGAGATTGCGCTCAGTAAATTCATCAAAAGGAATTCCTGTAAACTACTGTTCAGGGTTCCGTTCACTGAGCATGGCTTCTGCTTGTGAAGTTGATGGGGTTTCACGTCAGAGTTTTAACCTGGAGGTTAATGCCGTAGACTACGGTTTCAAACCCACTGATACCCCAAGAACTGACAGATCGGTCTTGAAGAATATAGAGTTGGGTTTAACAGCTCTTCATGGTCAAAAGGGACCGGCTTATGATCGAATAGTCTTGAATGCTGGAATGGTTGATCACTTGCTCGGATGTGATGGTGCAGAAGACATATCTGTAGCCCTGGATAGAGCCAGAGAGGCTATTGACAGTGGCAAGGCTCTAGAAAGGCTCTGGAATTACATAAAGGTAGCATACAGATCATACGTTTGTTCCTCAGATTTCGACAGCAGGTGGCATCCAACAATGCTTTGTTTTTTATGTCTAAAGATGGCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

596

Amino Acids

65.03

Weight (kDa)

6.07

Isoelectric Point (pI)

36.31

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008084)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G70570 AT1G70570
fragaria_vesca	FvH4_4g25910 FvH4_4g25910 FvH4_4g25910
malus_domestica	MD13G1098000.v1.1 MD16G1098900.v1.1
prunus_persica	Prupe.1G247400_v2.0.a1 Prupe.1G247400_v2.0.a1 Prupe.1G247400_v2.0.a1 Prupe.1G247400_v2.0.a1 Prupe.1G247400_v2.0.a1 Prupe.1G247400_v2.0.a1
pyrus_communis	pycom13g08560 pycom16g08420
rosa_chinensis	RchiOBHm_Chr4g0433361
rosa_laevigata	RLG00000006760
rosa_multiflora	Rmu_sc0000354.1_g000015 Rmu_sc0000759.1_g000013
rosa_roxburghii	Rroxscaffold_5G00374920
rosa_rugosa	Rorug04G0268000
rosa_samantha	Rh4AG322900 Rh4DG327100
rosa_wichuraiana	Rw4G027960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1734
AasI	GACNNNNNNGTC	1 cut(s)	1499
AatII	GACGTC	1 cut(s)	749
Acc36I	ACCTGC	1 cut(s)	1734
AccBSI	CCGCTC	1 cut(s)	161
AccI	GTMKAC	1 cut(s)	1455
AccII	CGCG	2 cut(s)	447, 493
AccIII	TCCGGA	1 cut(s)	188
AciI	CCGC	9 cut(s)	51, 126, 159, 432, 515, 536, 602, 669, 956
AcoI	YGGCCR	4 cut(s)	512, 663, 670, 750
AcsI	RAATTY	3 cut(s)	192, 1336, 1350
AcuI	CTGAAG	2 cut(s)	404, 1050
AcyI	GRCGYC	1 cut(s)	746
AfaI	GTAC	3 cut(s)	348, 509, 1092
AfiI	CCNNNNNNNGG	5 cut(s)	914, 1016, 1019, 1081, 1192
AgsI	TTSAA	5 cut(s)	706, 724, 1468, 1507, 1576
AjiI	CACGTC	2 cut(s)	544, 1424
AjnI	CCWGG	3 cut(s)	333, 1437, 1635
AjuI	GAANNNNNNNTTGG	4 cut(s)	211, 243, 1502, 1534
AloI	GAACNNNNNNTCC	2 cut(s)	533, 565
AluBI	AGCT	9 cut(s)	67, 143, 281, 382, 415, 591, 830, 1068, 1532
AluI	AGCT	9 cut(s)	67, 143, 281, 382, 415, 591, 830, 1068, 1532
Alw26I	GTCTC	3 cut(s)	234, 406, 482
Ama87I	CYCGRG	2 cut(s)	677, 1185
Aor13HI	TCCGGA	1 cut(s)	188
AoxI	GGCC	9 cut(s)	257, 301, 512, 599, 663, 670, 750, 1302, 1785
ApaI	GGGCCC	1 cut(s)	1306
ApeKI	GCWGC	3 cut(s)	412, 532, 953
ApoI	RAATTY	3 cut(s)	192, 1336, 1350
ArsI	GACNNNNNNTTYG	2 cut(s)	90, 122
AspLEI	GCGC	4 cut(s)	412, 449, 532, 1329
AspS9I	GGNCC	7 cut(s)	302, 331, 523, 599, 1302, 1303, 1550
AsuC2I	CCSGG	7 cut(s)	104, 461, 527, 563, 653, 1186, 1187
AsuHPI	GGTGA	4 cut(s)	28, 872, 1297, 1304
AvaI	CYCGRG	2 cut(s)	677, 1185
AvaII	GGWCC	3 cut(s)	331, 523, 1550
BaeGI	GKGCMC	1 cut(s)	1306
BanII	GRGCYC	2 cut(s)	649, 1306
BbsI	GAAGAC	2 cut(s)	1187, 1626
BbvI	GCAGC	3 cut(s)	424, 519, 940
BccI	CCATC	8 cut(s)	50, 493, 571, 734, 908, 1406, 1604, 1777
BceAI	ACGGC	4 cut(s)	113, 130, 703, 1436
BciT130I	CCWGG	3 cut(s)	335, 1439, 1637
BclI	TGATCA	1 cut(s)	1591
BcnI	CCSGG	7 cut(s)	104, 461, 527, 563, 653, 1186, 1187
BcoDI	GTCTC	3 cut(s)	234, 406, 482
BfaI	CTAG	4 cut(s)	288, 1097, 1676, 1789
BfmI	CTRYAG	1 cut(s)	1629
BfoI	RGCGCY	1 cut(s)	533
BfuAI	ACCTGC	1 cut(s)	1734
BglI	GCCNNNNNGGC	1 cut(s)	1652
BisI	GCNGC	9 cut(s)	159, 413, 432, 515, 533, 536, 602, 670, 954
BlsI	GCNGC	9 cut(s)	160, 414, 433, 516, 534, 537, 603, 671, 955
BmcAI	AGTACT	2 cut(s)	509, 1092
Bme18I	GGWCC	3 cut(s)	331, 523, 1550
BmeT110I	CYCGRG	2 cut(s)	677, 1185
BmgBI	CACGTC	2 cut(s)	544, 1424
BmgT120I	GGNCC	7 cut(s)	302, 331, 523, 599, 1302, 1303, 1550
BmiI	GGNNCC	5 cut(s)	396, 1303, 1304, 1376, 1551
BmsI	GCATC	3 cut(s)	196, 996, 1759
BpiI	GAAGAC	2 cut(s)	1187, 1626
BplI	GAGNNNNNCTC	4 cut(s)	147, 179, 386, 418
BpmI	CTGGAG	1 cut(s)	1460
BpuEI	CTTGAG	1 cut(s)	1028
BpuMI	CCSGG	7 cut(s)	104, 461, 527, 563, 653, 1186, 1187
BsaHI	GRCGYC	1 cut(s)	746
BsaJI	CCNNGG	6 cut(s)	254, 405, 676, 1185, 1186, 1635
BsaWI	WCCGGW	2 cut(s)	188, 374
BsaXI	ACNNNNNCTCC	2 cut(s)	557, 587
Bsc4I	CCNNNNNNNGG	5 cut(s)	914, 1016, 1019, 1081, 1192
Bse118I	RCCGGY	3 cut(s)	299, 665, 1552
Bse1I	ACTGG	3 cut(s)	398, 515, 1152
Bse3DI	GCAATG	3 cut(s)	197, 479, 767
BseAI	TCCGGA	1 cut(s)	188
BseBI	CCWGG	3 cut(s)	335, 1439, 1637
BseDI	CCNNGG	6 cut(s)	254, 405, 676, 1185, 1186, 1635
BseGI	GGATG	6 cut(s)	211, 745, 980, 1011, 1610, 1750
BseLI	CCNNNNNNNGG	5 cut(s)	914, 1016, 1019, 1081, 1192
BseMI	GCAATG	3 cut(s)	197, 479, 767
BseMII	CTCAG	6 cut(s)	296, 376, 1149, 1344, 1376, 1743
BseNI	ACTGG	3 cut(s)	398, 515, 1152
BseRI	GAGGAG	1 cut(s)	407
BseSI	GKGCMC	1 cut(s)	1306
BseX3I	CGGCCG	1 cut(s)	750
BseXI	GCAGC	3 cut(s)	424, 519, 940
BseYI	CCCAGC	1 cut(s)	139
BsgI	GTGCAG	1 cut(s)	1635
Bsh1236I	CGCG	2 cut(s)	447, 493
Bsh1285I	CGRYCG	3 cut(s)	121, 597, 753
BshFI	GGCC	9 cut(s)	259, 303, 514, 601, 665, 672, 752, 1304, 1787
BsiEI	CGRYCG	3 cut(s)	121, 597, 753
BsiHKCI	CYCGRG	2 cut(s)	677, 1185
BslFI	GGGAC	3 cut(s)	634, 757, 1563
BslI	CCNNNNNNNGG	5 cut(s)	914, 1016, 1019, 1081, 1192
BsmAI	GTCTC	3 cut(s)	234, 406, 482
BsmBI	CGTCTC	1 cut(s)	482
BsmFI	GGGAC	3 cut(s)	634, 757, 1563
BsmI	GAATGC	1 cut(s)	1582
BsnI	GGCC	9 cut(s)	259, 303, 514, 601, 665, 672, 752, 1304, 1787
BsoBI	CYCGRG	2 cut(s)	677, 1185
Bsp120I	GGGCCC	1 cut(s)	1302
Bsp1286I	GDGCHC	2 cut(s)	649, 1306
Bsp13I	TCCGGA	1 cut(s)	188
Bsp143I	GATC	6 cut(s)	365, 594, 1496, 1561, 1591, 1712
BspACI	CCGC	9 cut(s)	51, 126, 159, 432, 515, 536, 602, 669, 956
BspANI	GGCC	9 cut(s)	259, 303, 514, 601, 665, 672, 752, 1304, 1787
BspCNI	CTCAG	6 cut(s)	295, 375, 1150, 1343, 1377, 1742
BspEI	TCCGGA	1 cut(s)	188
BspFNI	CGCG	2 cut(s)	447, 493
BspHI	TCATGA	1 cut(s)	1219
BspLI	GGNNCC	5 cut(s)	396, 1303, 1304, 1376, 1551
BspMI	ACCTGC	1 cut(s)	1734
BspQI	GCTCTTC	1 cut(s)	1539
BsrBI	CCGCTC	1 cut(s)	161
BsrDI	GCAATG	3 cut(s)	197, 479, 767
BsrFI	RCCGGY	3 cut(s)	299, 665, 1552
BsrI	ACTGG	3 cut(s)	398, 515, 1152
BssAI	RCCGGY	3 cut(s)	299, 665, 1552
BssECI	CCNNGG	6 cut(s)	254, 405, 676, 1185, 1186, 1635
BssMI	GATC	6 cut(s)	365, 594, 1496, 1561, 1591, 1712
BssNI	GRCGYC	1 cut(s)	746
BssT1I	CCWWGG	1 cut(s)	405
Bst2UI	CCWGG	3 cut(s)	335, 1439, 1637
Bst4CI	ACNGT	9 cut(s)	122, 151, 178, 223, 271, 818, 1367, 1463, 1664
Bst6I	CTCTTC	3 cut(s)	15, 1255, 1539
BstACI	GRCGYC	1 cut(s)	746
BstC8I	GCNNGC	3 cut(s)	495, 667, 1083
BstDEI	CTNAG	6 cut(s)	282, 362, 1158, 1330, 1385, 1729
BstF5I	GGATG	6 cut(s)	211, 745, 980, 1011, 1610, 1750
BstFNI	CGCG	2 cut(s)	447, 493
BstH2I	RGCGCY	1 cut(s)	533
BstHHI	GCGC	4 cut(s)	412, 449, 532, 1329
BstKTI	GATC	6 cut(s)	368, 597, 1499, 1564, 1594, 1715
BstMAI	GTCTC	3 cut(s)	234, 406, 482
BstMBI	GATC	6 cut(s)	365, 594, 1496, 1561, 1591, 1712
BstMCI	CGRYCG	3 cut(s)	121, 597, 753
BstMWI	GCNNNNNNNGC	2 cut(s)	428, 1652
BstNI	CCWGG	3 cut(s)	335, 1439, 1637
BstSFI	CTRYAG	1 cut(s)	1629
BstSLI	GKGCMC	1 cut(s)	1306
BstUI	CGCG	2 cut(s)	447, 493
BstV1I	GCAGC	3 cut(s)	424, 519, 940
BstV2I	GAAGAC	2 cut(s)	1187, 1626
BstZI	CGGCCG	1 cut(s)	750
BsuRI	GGCC	9 cut(s)	259, 303, 514, 601, 665, 672, 752, 1304, 1787
BtgZI	GCGATG	3 cut(s)	353, 512, 538
BtrI	CACGTC	2 cut(s)	544, 1424
BtsCI	GGATG	6 cut(s)	211, 745, 980, 1011, 1610, 1750
BtsIMutI	CAGTG	4 cut(s)	1145, 1382, 1473, 1669
BveI	ACCTGC	1 cut(s)	1734
Cac8I	GCNNGC	3 cut(s)	495, 667, 1083
CciI	TCATGA	1 cut(s)	1219
CfoI	GCGC	4 cut(s)	412, 449, 532, 1329
Cfr10I	RCCGGY	3 cut(s)	299, 665, 1552
Cfr13I	GGNCC	7 cut(s)	302, 331, 523, 599, 1302, 1303, 1550
Cfr9I	CCCGGG	1 cut(s)	1185
CseI	GACGC	2 cut(s)	478, 499
Csp6I	GTAC	3 cut(s)	347, 508, 1091
CviAII	CATG	6 cut(s)	436, 992, 1051, 1220, 1390, 1538
CviQI	GTAC	3 cut(s)	347, 508, 1091
DdeI	CTNAG	6 cut(s)	282, 362, 1158, 1330, 1385, 1729
DpnI	GATC	6 cut(s)	367, 596, 1498, 1563, 1593, 1714
DpnII	GATC	6 cut(s)	365, 594, 1496, 1561, 1591, 1712
DrdI	GACNNNNNNGTC	1 cut(s)	1499
DseDI	GACNNNNNNGTC	1 cut(s)	1499
EaeI	YGGCCR	4 cut(s)	512, 663, 670, 750
EagI	CGGCCG	1 cut(s)	750
Eam1104I	CTCTTC	3 cut(s)	15, 1255, 1539
EarI	CTCTTC	3 cut(s)	15, 1255, 1539
EciI	GGCGGA	1 cut(s)	115
EclXI	CGGCCG	1 cut(s)	750
Eco130I	CCWWGG	1 cut(s)	405
Eco24I	GRGCYC	2 cut(s)	649, 1306
Eco47I	GGWCC	3 cut(s)	331, 523, 1550
Eco52I	CGGCCG	1 cut(s)	750
Eco57I	CTGAAG	2 cut(s)	404, 1050
Eco88I	CYCGRG	2 cut(s)	677, 1185
EcoO109I	RGGNCCY	2 cut(s)	1302, 1303
EcoRI	GAATTC	1 cut(s)	1350
EcoRII	CCWGG	3 cut(s)	333, 1437, 1635
EcoT14I	CCWWGG	1 cut(s)	405
EcoT38I	GRGCYC	2 cut(s)	649, 1306
ErhI	CCWWGG	1 cut(s)	405
Esp3I	CGTCTC	1 cut(s)	482
FaeI	CATG	6 cut(s)	439, 995, 1054, 1223, 1393, 1541
FaqI	GGGAC	3 cut(s)	634, 757, 1563
FatI	CATG	6 cut(s)	435, 991, 1050, 1219, 1389, 1537
FbaI	TGATCA	1 cut(s)	1591
FblI	GTMKAC	1 cut(s)	1455
Fnu4HI	GCNGC	9 cut(s)	159, 413, 432, 515, 533, 536, 602, 670, 954
FokI	GGATG	6 cut(s)	218, 752, 967, 1018, 1617, 1737
FriOI	GRGCYC	2 cut(s)	649, 1306
Fsp4HI	GCNGC	9 cut(s)	159, 413, 432, 515, 533, 536, 602, 670, 954
FspBI	CTAG	4 cut(s)	288, 1097, 1676, 1789
GlaI	GCGC	4 cut(s)	411, 448, 531, 1328
GluI	GCNGC	9 cut(s)	159, 413, 432, 515, 533, 536, 602, 670, 954
GsaI	CCCAGC	1 cut(s)	143
GsuI	CTGGAG	1 cut(s)	1460
HaeII	RGCGCY	1 cut(s)	533
HaeIII	GGCC	9 cut(s)	259, 303, 514, 601, 665, 672, 752, 1304, 1787
HgaI	GACGC	2 cut(s)	478, 499
HhaI	GCGC	4 cut(s)	412, 449, 532, 1329
Hin1I	GRCGYC	1 cut(s)	746
Hin1II	CATG	6 cut(s)	439, 995, 1054, 1223, 1393, 1541
Hin6I	GCGC	4 cut(s)	410, 447, 530, 1327
HinP1I	GCGC	4 cut(s)	410, 447, 530, 1327
HincII	GTYRAC	1 cut(s)	181
HindII	GTYRAC	1 cut(s)	181
HindIII	AAGCTT	1 cut(s)	828
HinfI	GANTC	7 cut(s)	167, 242, 262, 442, 764, 977, 1235
HpaI	GTTAAC	1 cut(s)	181
HphI	GGTGA	4 cut(s)	28, 872, 1297, 1304
Hpy166II	GTNNAC	4 cut(s)	181, 1360, 1382, 1456
Hpy188III	TCNNGA	9 cut(s)	164, 189, 1097, 1133, 1220, 1504, 1573, 1676, 1687
Hpy8I	GTNNAC	4 cut(s)	181, 1360, 1382, 1456
Hpy99I	CGWCG	6 cut(s)	271, 472, 733, 736, 751, 1081
HpyAV	CCTTC	7 cut(s)	337, 476, 1156, 1186, 1217, 1282, 1292
HpyCH4III	ACNGT	9 cut(s)	122, 151, 178, 223, 271, 818, 1367, 1463, 1664
HpyCH4IV	ACGT	5 cut(s)	543, 711, 746, 1423, 1719
HpyCH4V	TGCA	4 cut(s)	297, 694, 842, 1616
HpyF10VI	GCNNNNNNNGC	2 cut(s)	428, 1652
HpyF3I	CTNAG	6 cut(s)	282, 362, 1158, 1330, 1385, 1729
HpySE526I	ACGT	5 cut(s)	543, 711, 746, 1423, 1719
Hsp92I	GRCGYC	1 cut(s)	746
Hsp92II	CATG	6 cut(s)	439, 995, 1054, 1223, 1393, 1541
HspAI	GCGC	4 cut(s)	410, 447, 530, 1327
Kpn2I	TCCGGA	1 cut(s)	188
KroI	GCCGGC	1 cut(s)	665
KroNI	GCCGGC	1 cut(s)	667
Ksp22I	TGATCA	1 cut(s)	1591
KspAI	GTTAAC	1 cut(s)	181
Kzo9I	GATC	6 cut(s)	365, 594, 1496, 1561, 1591, 1712
LguI	GCTCTTC	1 cut(s)	1539
LmnI	GCTCC	5 cut(s)	394, 419, 477, 1055, 1124
Lsp1109I	GCAGC	3 cut(s)	424, 519, 940
LweI	GCATC	3 cut(s)	196, 996, 1759
MaeI	CTAG	4 cut(s)	288, 1097, 1676, 1789
MaeII	ACGT	5 cut(s)	543, 711, 746, 1423, 1719
MaeIII	GTNAC	3 cut(s)	172, 1024, 1204
MalI	GATC	6 cut(s)	367, 596, 1498, 1563, 1593, 1714
MbiI	CCGCTC	1 cut(s)	161
MboI	GATC	6 cut(s)	365, 594, 1496, 1561, 1591, 1712
MfeI	CAATTG	2 cut(s)	451, 1200
MhlI	GDGCHC	2 cut(s)	649, 1306
MlyI	GAGTC	2 cut(s)	161, 236
MmeI	TCCRAC	3 cut(s)	242, 290, 1778
MroI	TCCGGA	1 cut(s)	188
MroNI	GCCGGC	1 cut(s)	665
MseI	TTAA	8 cut(s)	180, 785, 824, 1113, 1244, 1434, 1446, 1526
MunI	CAATTG	2 cut(s)	451, 1200
Mva1269I	GAATGC	1 cut(s)	1582
MvaI	CCWGG	3 cut(s)	335, 1439, 1637
MvnI	CGCG	2 cut(s)	447, 493
MwoI	GCNNNNNNNGC	2 cut(s)	428, 1652
NaeI	GCCGGC	1 cut(s)	667
NciI	CCSGG	7 cut(s)	104, 461, 527, 563, 653, 1186, 1187
NdeII	GATC	6 cut(s)	365, 594, 1496, 1561, 1591, 1712
NgoMIV	GCCGGC	1 cut(s)	665
NlaIII	CATG	6 cut(s)	439, 995, 1054, 1223, 1393, 1541
NlaIV	GGNNCC	5 cut(s)	396, 1303, 1304, 1376, 1551
NmeAIII	GCCGAG	2 cut(s)	279, 303
NmuCI	GTSAC	1 cut(s)	1204
PagI	TCATGA	1 cut(s)	1219
PaqCI	CACCTGC	1 cut(s)	1734
PciSI	GCTCTTC	1 cut(s)	1539
PcsI	WCGNNNNNNNCGW	1 cut(s)	931
PctI	GAATGC	1 cut(s)	1582
PdiI	GCCGGC	1 cut(s)	667
PfeI	GAWTC	5 cut(s)	262, 442, 764, 977, 1235
PflFI	GACNNNGTC	1 cut(s)	1075
PfoI	TCCNGGA	2 cut(s)	459, 651
PkrI	GCNGC	9 cut(s)	160, 414, 433, 516, 534, 537, 603, 671, 955
Ple19I	CGATCG	1 cut(s)	597
PleI	GAGTC	2 cut(s)	161, 236
PpsI	GAGTC	2 cut(s)	161, 236
Psp6I	CCWGG	3 cut(s)	333, 1437, 1635
PspFI	CCCAGC	1 cut(s)	139
PspGI	CCWGG	3 cut(s)	333, 1437, 1635
PspN4I	GGNNCC	5 cut(s)	396, 1303, 1304, 1376, 1551
PspOMI	GGGCCC	1 cut(s)	1302
PspPI	GGNCC	7 cut(s)	302, 331, 523, 599, 1302, 1303, 1550
PsyI	GACNNNGTC	1 cut(s)	1075
PvuI	CGATCG	1 cut(s)	597
RsaI	GTAC	3 cut(s)	348, 509, 1092
RsaNI	GTAC	3 cut(s)	347, 508, 1091
SapI	GCTCTTC	1 cut(s)	1539
SaqAI	TTAA	8 cut(s)	180, 785, 824, 1113, 1244, 1434, 1446, 1526
SatI	GCNGC	9 cut(s)	159, 413, 432, 515, 533, 536, 602, 670, 954
Sau3AI	GATC	6 cut(s)	365, 594, 1496, 1561, 1591, 1712
Sau96I	GGNCC	7 cut(s)	302, 331, 523, 599, 1302, 1303, 1550
ScaI	AGTACT	2 cut(s)	509, 1092
SchI	GAGTC	2 cut(s)	161, 236
SduI	GDGCHC	2 cut(s)	649, 1306
SfaNI	GCATC	3 cut(s)	196, 996, 1759
SfcI	CTRYAG	1 cut(s)	1629
SinI	GGWCC	3 cut(s)	331, 523, 1550
SmaI	CCCGGG	1 cut(s)	1187
SmlI	CTYRAG	1 cut(s)	1043
SmoI	CTYRAG	1 cut(s)	1043
SsiI	CCGC	9 cut(s)	51, 126, 159, 432, 515, 536, 602, 669, 956
SspMI	CTAG	4 cut(s)	288, 1097, 1676, 1789
StyI	CCWWGG	1 cut(s)	405
TaaI	ACNGT	9 cut(s)	122, 151, 178, 223, 271, 818, 1367, 1463, 1664
TaiI	ACGT	5 cut(s)	546, 714, 749, 1426, 1722
TaqI	TCGA	7 cut(s)	85, 165, 351, 593, 728, 1564, 1737
TaqII	GACCGA	1 cut(s)	1489
TatI	WGTACW	2 cut(s)	507, 1090
TauI	GCSGC	6 cut(s)	161, 434, 517, 538, 604, 672
TfiI	GAWTC	5 cut(s)	262, 442, 764, 977, 1235
Tru1I	TTAA	8 cut(s)	180, 785, 824, 1113, 1244, 1434, 1446, 1526
Tru9I	TTAA	8 cut(s)	180, 785, 824, 1113, 1244, 1434, 1446, 1526
TscAI	CASTG	4 cut(s)	1152, 1389, 1480, 1669
TseFI	GTSAC	1 cut(s)	1204
TseI	GCWGC	3 cut(s)	412, 532, 953
Tsp45I	GTSAC	1 cut(s)	1204
TspGWI	ACGGA	3 cut(s)	160, 749, 1367
TspMI	CCCGGG	1 cut(s)	1185
TspRI	CASTG	4 cut(s)	1152, 1389, 1480, 1669
Tth111I	GACNNNGTC	1 cut(s)	1075
VpaK11BI	GGWCC	3 cut(s)	331, 523, 1550
XapI	RAATTY	3 cut(s)	192, 1336, 1350
XbaI	TCTAGA	2 cut(s)	1096, 1675
XmaI	CCCGGG	1 cut(s)	1185
XmiI	GTMKAC	1 cut(s)	1455
XspI	CTAG	4 cut(s)	288, 1097, 1676, 1789
ZraI	GACGTC	1 cut(s)	747
ZrmI	AGTACT	2 cut(s)	509, 1092

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.