Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0008084

Physical Location & Seq

Genomic Coordinates Forward (+)

54675071 .. 54678474

Gene Structure 3404 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G027960.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1797 bp

ATGAAATCTCTTCTCTATCCACACCCTCTTTCTCTCACCTCCATCTCCACCGCCAAACCCCAACACCTCACTCTCTCCCACACCCGAACATTCCTCAAACTCCCGGCCAATCACGGCGACCGTTCCGCCGTTAGGAACCCAGCTCTGACCGTCAGAGCCGCTCTCGACTCCGTCACGGTTAACCAATCCGGAATTTCATTGCCGGATGCCAGAAATCCAACGGTTTCATCTTCTTATAGAGACTCCAAGTTGCCGAGGCCGAATCCGACCGTGCTGGAAGCTCAGACTAGGGTTTGTACCGGCCCAACCCAGACCAAGCCTCTCGGCGAGGACCAGGCGATGAAGGTACTCGACACCATTCTCAGATCCGCCACCGGAGAGCTGAAGGATGAGGAGCCAGTCTCCAAGGCGCAGCTCGGAGCGTTCTTCGCCGCCATGACGATTCGCGCCAATTGTTTCCCGGAGGCGACGCAATGGAGCGAAGGCGAGACTCGAGCGATGGACAAGTACTGGCCGCTTCTGGTCCGGGCGCTGCCGCCGGACGTGGTGTTCATCGCCGACCCGGAGGGTTCGTTGATGGGGATAGGAAGCTCGATCGGGCCGCAATTCGTTGGGAACGGGACGAGTGATATGAGATTGGTCGGTGCTCTCCGGGAGGTCTTGGCCGGCGGCCACCTCGGGTATGAGGAAGTGCAAGGTGTTTTGAAAGACGTTTTGCCGTTGAAATCGACGACGGAGGATGGGACGTCCGCCGGAGTAAGTGAATCATTGCTTTCGGCATTGTTAATAGGTCAGCGTATGAACAGAGAAACAGACCGTGAATTAAAAGCTTACTGCCTTGCATTTGATGATGAACTTGGTGAAACTCCGATTGCTGATGTGAAATCACTAACTCACTATGGTGAACCTTATGATGGAAACACTCGTTTTTTTCGTAGCACATTGTTTGTTGCTGCGGTTAGGTCGTGTTATGCTGAATCATCCCTGCTTCATGGTGTTGAATGGATGCCCCCAAAGGGAGGTGTTACTGAAGAACAGATGCTCAAGTTCATGGGAGCAGATACGAGCTTGACCCCGTCGCAGGCAAAAGTACTTCTAGAGGATGAAGAAGTTGGGTTTGCCTATATAAGTCATCGTGAAGCCCGCCCATCTCTATATTCATTGCTGAAGTTGAGGGAGCATATCAAGAAACGCCCCCCACTGGCAACGTCTGAAAAGGTTCAGCAGTTTGTGAAGGCCCGGGGGAAGGAAGCAATTGTCACCGGATTTTATCATGAAGGTTATGAGGATTCACTCTTAATGCTTATGAAAAGAAGAGGTGTTCATTCTGGCTTGGTGGTGAAGGGTGAGGAAGGGGCCCTCTCAATGACAACGAGATTGCGCTCAGTAAATTCATCAAAAGGAATTCCTGTAAACTACTGTTCAGGGTTCCGTTCACTGAGCATGGCTTCTGCTTGTGAAGTTGATGGGGTTTCACGGCAGAGTTTTAACCTGGAGGTTAATGCCGTAGACTACGGTTTCGAACCCACTGATACCCCAAGAACTGACAGATCGGTCTTGAAGAATATAGAGTTGGGTTTAACAGCTCTTCATGGTCAAAAGGGACCGGCTTATGATCGAATAGTCTTAAATGCTGGAATGGTTGATCACTTGCTCGGATGTAATGGTGCAGAAGACATATCTGTGGCCCTGGATAGAGCTAGAGAGGCTATTGACAGTGGCAAGGCTCTAGAAAGGCTCTGGAATTACATAAAGGTATCTAAACAAGTGAGACACCGGGCTGTGATGTGTGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

598

Amino Acids

65.36

Weight (kDa)

6.56

Isoelectric Point (pI)

35.72

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008084)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G70570 AT1G70570
fragaria_vesca	FvH4_4g25910 FvH4_4g25910 FvH4_4g25910
malus_domestica	MD13G1098000.v1.1 MD16G1098900.v1.1
prunus_persica	Prupe.1G247400_v2.0.a1 Prupe.1G247400_v2.0.a1 Prupe.1G247400_v2.0.a1 Prupe.1G247400_v2.0.a1 Prupe.1G247400_v2.0.a1 Prupe.1G247400_v2.0.a1
pyrus_communis	pycom13g08560 pycom16g08420
rosa_chinensis	RchiOBHm_Chr4g0433361
rosa_laevigata	RLG00000006760
rosa_multiflora	Rmu_sc0000354.1_g000015 Rmu_sc0000759.1_g000013
rosa_roxburghii	Rroxscaffold_5G00374920
rosa_rugosa	Rorug04G0268000
rosa_samantha	Rh4AG322900 Rh4DG327100
rosa_wichuraiana	Rw4G027960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1553
AatII	GACGTC	1 cut(s)	749
AccBSI	CCGCTC	1 cut(s)	161
AccI	GTMKAC	1 cut(s)	1509
AccII	CGCG	1 cut(s)	447
AccIII	TCCGGA	1 cut(s)	188
AclWI	GGATC	1 cut(s)	360
AcoI	YGGCCR	4 cut(s)	105, 512, 663, 670
AcsI	RAATTY	3 cut(s)	192, 1390, 1404
AcuI	CTGAAG	3 cut(s)	404, 1050, 1187
AcyI	GRCGYC	1 cut(s)	746
AfaI	GTAC	4 cut(s)	298, 348, 509, 1092
AfiI	CCNNNNNNNGG	7 cut(s)	132, 914, 1016, 1019, 1081, 1201, 1246
AgsI	TTSAA	4 cut(s)	706, 724, 1001, 1561
AjiI	CACGTC	1 cut(s)	544
AjnI	CCWGG	3 cut(s)	333, 1491, 1689
AjuI	GAANNNNNNNTTGG	2 cut(s)	1556, 1588
AleI	CACNNNNGTG	1 cut(s)	900
AloI	GAACNNNNNNTCC	2 cut(s)	533, 565
AluBI	AGCT	9 cut(s)	143, 281, 382, 415, 591, 830, 1068, 1586, 1700
AluI	AGCT	9 cut(s)	143, 281, 382, 415, 591, 830, 1068, 1586, 1700
Alw21I	GWGCWC	1 cut(s)	649
Alw26I	GTCTC	4 cut(s)	234, 406, 482, 1765
AlwI	GGATC	1 cut(s)	360
Ama87I	CYCGRG	3 cut(s)	492, 677, 1239
Aor13HI	TCCGGA	1 cut(s)	188
ApaI	GGGCCC	1 cut(s)	1360
ApeKI	GCWGC	3 cut(s)	412, 532, 953
ApoI	RAATTY	3 cut(s)	192, 1390, 1404
ArsI	GACNNNNNNTTYG	2 cut(s)	1502, 1534
Asp700I	GAANNNNTTC	1 cut(s)	1218
AspLEI	GCGC	4 cut(s)	412, 449, 532, 1383
AspS9I	GGNCC	9 cut(s)	302, 331, 523, 599, 1237, 1356, 1357, 1604, 1687
AsuC2I	CCSGG	8 cut(s)	104, 461, 527, 563, 653, 1240, 1241, 1778
AsuHPI	GGTGA	6 cut(s)	28, 872, 914, 1252, 1351, 1358
AsuII	TTCGAA	1 cut(s)	1521
AvaI	CYCGRG	3 cut(s)	492, 677, 1239
AvaII	GGWCC	3 cut(s)	331, 523, 1604
BaeGI	GKGCMC	1 cut(s)	1360
BanII	GRGCYC	1 cut(s)	1360
BbsI	GAAGAC	1 cut(s)	1680
Bbv12I	GWGCWC	1 cut(s)	649
BbvI	GCAGC	3 cut(s)	424, 519, 940
BccI	CCATC	7 cut(s)	50, 493, 571, 734, 908, 1156, 1460
BceAI	ACGGC	5 cut(s)	113, 130, 703, 1490, 1493
BciT130I	CCWGG	3 cut(s)	335, 1493, 1691
BclI	TGATCA	1 cut(s)	1645
BcnI	CCSGG	8 cut(s)	104, 461, 527, 563, 653, 1240, 1241, 1778
BcoDI	GTCTC	4 cut(s)	234, 406, 482, 1765
BfaI	CTAG	4 cut(s)	288, 1097, 1701, 1730
BfoI	RGCGCY	1 cut(s)	533
BisI	GCNGC	9 cut(s)	159, 413, 432, 515, 533, 536, 602, 670, 954
BlsI	GCNGC	9 cut(s)	160, 414, 433, 516, 534, 537, 603, 671, 955
BmcAI	AGTACT	2 cut(s)	509, 1092
Bme18I	GGWCC	3 cut(s)	331, 523, 1604
BmeT110I	CYCGRG	3 cut(s)	492, 677, 1239
BmgBI	CACGTC	1 cut(s)	544
BmgT120I	GGNCC	9 cut(s)	302, 331, 523, 599, 1237, 1356, 1357, 1604, 1687
BmiI	GGNNCC	6 cut(s)	137, 396, 1357, 1358, 1430, 1605
BmsI	GCATC	3 cut(s)	196, 996, 1029
BpiI	GAAGAC	1 cut(s)	1680
BplI	GAGNNNNNCTC	4 cut(s)	147, 179, 386, 418
BpmI	CTGGAG	1 cut(s)	1514
Bpu14I	TTCGAA	1 cut(s)	1521
BpuEI	CTTGAG	1 cut(s)	1028
BpuMI	CCSGG	8 cut(s)	104, 461, 527, 563, 653, 1240, 1241, 1778
BsaHI	GRCGYC	1 cut(s)	746
BsaJI	CCNNGG	6 cut(s)	254, 405, 676, 1239, 1240, 1689
BsaWI	WCCGGW	3 cut(s)	188, 374, 1262
BsaXI	ACNNNNNCTCC	2 cut(s)	557, 587
Bsc4I	CCNNNNNNNGG	7 cut(s)	132, 914, 1016, 1019, 1081, 1201, 1246
Bse118I	RCCGGY	3 cut(s)	299, 665, 1606
Bse1I	ACTGG	3 cut(s)	398, 515, 1206
Bse3DI	GCAATG	4 cut(s)	197, 479, 767, 1160
BseAI	TCCGGA	1 cut(s)	188
BseBI	CCWGG	3 cut(s)	335, 1493, 1691
BseDI	CCNNGG	6 cut(s)	254, 405, 676, 1239, 1240, 1689
BseGI	GGATG	7 cut(s)	211, 394, 745, 980, 1011, 1108, 1664
BseLI	CCNNNNNNNGG	7 cut(s)	132, 914, 1016, 1019, 1081, 1201, 1246
BseMI	GCAATG	4 cut(s)	197, 479, 767, 1160
BseMII	CTCAG	4 cut(s)	296, 376, 1398, 1430
BseNI	ACTGG	3 cut(s)	398, 515, 1206
BseRI	GAGGAG	1 cut(s)	407
BseSI	GKGCMC	1 cut(s)	1360
BseXI	GCAGC	3 cut(s)	424, 519, 940
BseYI	CCCAGC	1 cut(s)	139
BsgI	GTGCAG	1 cut(s)	1689
Bsh1236I	CGCG	1 cut(s)	447
Bsh1285I	CGRYCG	3 cut(s)	121, 270, 597
BsiEI	CGRYCG	3 cut(s)	121, 270, 597
BsiHKAI	GWGCWC	1 cut(s)	649
BsiHKCI	CYCGRG	3 cut(s)	492, 677, 1239
BslFI	GGGAC	3 cut(s)	634, 757, 1617
BslI	CCNNNNNNNGG	7 cut(s)	132, 914, 1016, 1019, 1081, 1201, 1246
BsmAI	GTCTC	4 cut(s)	234, 406, 482, 1765
BsmFI	GGGAC	3 cut(s)	634, 757, 1617
BsoBI	CYCGRG	3 cut(s)	492, 677, 1239
Bsp119I	TTCGAA	1 cut(s)	1521
Bsp120I	GGGCCC	1 cut(s)	1356
Bsp1286I	GDGCHC	2 cut(s)	649, 1360
Bsp13I	TCCGGA	1 cut(s)	188
Bsp143I	GATC	5 cut(s)	365, 594, 1550, 1615, 1645
BspCNI	CTCAG	4 cut(s)	295, 375, 1397, 1431
BspEI	TCCGGA	1 cut(s)	188
BspFNI	CGCG	1 cut(s)	447
BspHI	TCATGA	1 cut(s)	1273
BspLI	GGNNCC	6 cut(s)	137, 396, 1357, 1358, 1430, 1605
BspPI	GGATC	1 cut(s)	360
BspQI	GCTCTTC	1 cut(s)	1593
BspT104I	TTCGAA	1 cut(s)	1521
BsrBI	CCGCTC	1 cut(s)	161
BsrDI	GCAATG	4 cut(s)	197, 479, 767, 1160
BsrFI	RCCGGY	3 cut(s)	299, 665, 1606
BsrI	ACTGG	3 cut(s)	398, 515, 1206
BssAI	RCCGGY	3 cut(s)	299, 665, 1606
BssECI	CCNNGG	6 cut(s)	254, 405, 676, 1239, 1240, 1689
BssMI	GATC	5 cut(s)	365, 594, 1550, 1615, 1645
BssNI	GRCGYC	1 cut(s)	746
BssT1I	CCWWGG	1 cut(s)	405
Bst2UI	CCWGG	3 cut(s)	335, 1493, 1691
Bst4CI	ACNGT	9 cut(s)	122, 151, 178, 223, 271, 818, 1421, 1517, 1718
Bst6I	CTCTTC	3 cut(s)	15, 1309, 1593
BstACI	GRCGYC	1 cut(s)	746
BstBI	TTCGAA	1 cut(s)	1521
BstC8I	GCNNGC	3 cut(s)	667, 1083, 1144
BstDEI	CTNAG	4 cut(s)	282, 362, 1384, 1439
BstF5I	GGATG	7 cut(s)	211, 394, 745, 980, 1011, 1108, 1664
BstFNI	CGCG	1 cut(s)	447
BstH2I	RGCGCY	1 cut(s)	533
BstHHI	GCGC	4 cut(s)	412, 449, 532, 1383
BstKTI	GATC	5 cut(s)	368, 597, 1553, 1618, 1648
BstMAI	GTCTC	4 cut(s)	234, 406, 482, 1765
BstMBI	GATC	5 cut(s)	365, 594, 1550, 1615, 1645
BstMCI	CGRYCG	3 cut(s)	121, 270, 597
BstMWI	GCNNNNNNNGC	2 cut(s)	428, 1706
BstNI	CCWGG	3 cut(s)	335, 1493, 1691
BstSLI	GKGCMC	1 cut(s)	1360
BstUI	CGCG	1 cut(s)	447
BstV1I	GCAGC	3 cut(s)	424, 519, 940
BstV2I	GAAGAC	1 cut(s)	1680
BstX2I	RGATCY	1 cut(s)	365
BstYI	RGATCY	1 cut(s)	365
BtgZI	GCGATG	3 cut(s)	353, 512, 538
BtrI	CACGTC	1 cut(s)	544
BtsCI	GGATG	7 cut(s)	211, 394, 745, 980, 1011, 1108, 1664
BtsIMutI	CAGTG	4 cut(s)	1199, 1436, 1527, 1723
Cac8I	GCNNGC	3 cut(s)	667, 1083, 1144
CciI	TCATGA	1 cut(s)	1273
CfoI	GCGC	4 cut(s)	412, 449, 532, 1383
Cfr10I	RCCGGY	3 cut(s)	299, 665, 1606
Cfr13I	GGNCC	9 cut(s)	302, 331, 523, 599, 1237, 1356, 1357, 1604, 1687
Cfr9I	CCCGGG	1 cut(s)	1239
CseI	GACGC	1 cut(s)	478
Csp6I	GTAC	4 cut(s)	297, 347, 508, 1091
CviAII	CATG	6 cut(s)	436, 992, 1051, 1274, 1444, 1592
CviQI	GTAC	4 cut(s)	297, 347, 508, 1091
DdeI	CTNAG	4 cut(s)	282, 362, 1384, 1439
DpnI	GATC	5 cut(s)	367, 596, 1552, 1617, 1647
DpnII	GATC	5 cut(s)	365, 594, 1550, 1615, 1645
DrdI	GACNNNNNNGTC	1 cut(s)	1553
DseDI	GACNNNNNNGTC	1 cut(s)	1553
EaeI	YGGCCR	4 cut(s)	105, 512, 663, 670
Eam1104I	CTCTTC	3 cut(s)	15, 1309, 1593
EarI	CTCTTC	3 cut(s)	15, 1309, 1593
EciI	GGCGGA	3 cut(s)	115, 358, 739
Eco130I	CCWWGG	1 cut(s)	405
Eco24I	GRGCYC	1 cut(s)	1360
Eco47I	GGWCC	3 cut(s)	331, 523, 1604
Eco57I	CTGAAG	3 cut(s)	404, 1050, 1187
Eco88I	CYCGRG	3 cut(s)	492, 677, 1239
EcoO109I	RGGNCCY	2 cut(s)	1356, 1357
EcoRI	GAATTC	1 cut(s)	1404
EcoRII	CCWGG	3 cut(s)	333, 1491, 1689
EcoT14I	CCWWGG	1 cut(s)	405
EcoT38I	GRGCYC	1 cut(s)	1360
ErhI	CCWWGG	1 cut(s)	405
FaeI	CATG	6 cut(s)	439, 995, 1054, 1277, 1447, 1595
FaqI	GGGAC	3 cut(s)	634, 757, 1617
FatI	CATG	6 cut(s)	435, 991, 1050, 1273, 1443, 1591
FauI	CCCGC	1 cut(s)	1151
FbaI	TGATCA	1 cut(s)	1645
FblI	GTMKAC	1 cut(s)	1509
Fnu4HI	GCNGC	9 cut(s)	159, 413, 432, 515, 533, 536, 602, 670, 954
FokI	GGATG	7 cut(s)	218, 401, 752, 967, 1018, 1115, 1671
FriOI	GRGCYC	1 cut(s)	1360
Fsp4HI	GCNGC	9 cut(s)	159, 413, 432, 515, 533, 536, 602, 670, 954
FspBI	CTAG	4 cut(s)	288, 1097, 1701, 1730
GlaI	GCGC	4 cut(s)	411, 448, 531, 1382
GluI	GCNGC	9 cut(s)	159, 413, 432, 515, 533, 536, 602, 670, 954
GsaI	CCCAGC	1 cut(s)	143
GsuI	CTGGAG	1 cut(s)	1514
HaeII	RGCGCY	1 cut(s)	533
HgaI	GACGC	1 cut(s)	478
HhaI	GCGC	4 cut(s)	412, 449, 532, 1383
Hin1I	GRCGYC	1 cut(s)	746
Hin1II	CATG	6 cut(s)	439, 995, 1054, 1277, 1447, 1595
Hin6I	GCGC	4 cut(s)	410, 447, 530, 1381
HinP1I	GCGC	4 cut(s)	410, 447, 530, 1381
HincII	GTYRAC	1 cut(s)	181
HindII	GTYRAC	1 cut(s)	181
HindIII	AAGCTT	1 cut(s)	828
HinfI	GANTC	8 cut(s)	167, 242, 262, 442, 490, 764, 977, 1289
HpaI	GTTAAC	1 cut(s)	181
HphI	GGTGA	6 cut(s)	28, 872, 914, 1252, 1351, 1358
Hpy166II	GTNNAC	5 cut(s)	181, 905, 1414, 1436, 1510
Hpy188I	TCNGA	9 cut(s)	147, 155, 267, 285, 365, 419, 870, 1213, 1658
Hpy188III	TCNNGA	9 cut(s)	164, 189, 1097, 1136, 1186, 1274, 1558, 1730, 1741
Hpy8I	GTNNAC	5 cut(s)	181, 905, 1414, 1436, 1510
Hpy99I	CGWCG	4 cut(s)	472, 733, 736, 1081
HpyAV	CCTTC	8 cut(s)	337, 379, 476, 1228, 1240, 1271, 1336, 1346
HpyCH4III	ACNGT	9 cut(s)	122, 151, 178, 223, 271, 818, 1421, 1517, 1718
HpyCH4IV	ACGT	4 cut(s)	543, 711, 746, 1208
HpyCH4V	TGCA	3 cut(s)	694, 842, 1670
HpyF10VI	GCNNNNNNNGC	2 cut(s)	428, 1706
HpyF3I	CTNAG	4 cut(s)	282, 362, 1384, 1439
HpySE526I	ACGT	4 cut(s)	543, 711, 746, 1208
Hsp92I	GRCGYC	1 cut(s)	746
Hsp92II	CATG	6 cut(s)	439, 995, 1054, 1277, 1447, 1595
HspAI	GCGC	4 cut(s)	410, 447, 530, 1381
Kpn2I	TCCGGA	1 cut(s)	188
KroI	GCCGGC	1 cut(s)	665
KroNI	GCCGGC	1 cut(s)	667
Ksp22I	TGATCA	1 cut(s)	1645
KspAI	GTTAAC	1 cut(s)	181
Kzo9I	GATC	5 cut(s)	365, 594, 1550, 1615, 1645
LguI	GCTCTTC	1 cut(s)	1593
LmnI	GCTCC	5 cut(s)	394, 419, 477, 1055, 1177
Lsp1109I	GCAGC	3 cut(s)	424, 519, 940
LweI	GCATC	3 cut(s)	196, 996, 1029
MaeI	CTAG	4 cut(s)	288, 1097, 1701, 1730
MaeII	ACGT	4 cut(s)	543, 711, 746, 1208
MaeIII	GTNAC	3 cut(s)	172, 1024, 1258
MalI	GATC	5 cut(s)	367, 596, 1552, 1617, 1647
MbiI	CCGCTC	1 cut(s)	161
MboI	GATC	5 cut(s)	365, 594, 1550, 1615, 1645
MboII	GAAGA	8 cut(s)	222, 418, 1043, 1118, 1326, 1573, 1580, 1685
MfeI	CAATTG	2 cut(s)	451, 1254
MflI	RGATCY	1 cut(s)	365
MhlI	GDGCHC	2 cut(s)	649, 1360
MluCI	AATT	8 cut(s)	192, 451, 605, 821, 1254, 1390, 1404, 1744
MlyI	GAGTC	3 cut(s)	161, 236, 484
MmeI	TCCRAC	2 cut(s)	242, 290
MroI	TCCGGA	1 cut(s)	188
MroNI	GCCGGC	1 cut(s)	665
MroXI	GAANNNNTTC	1 cut(s)	1218
MseI	TTAA	8 cut(s)	180, 785, 824, 1298, 1488, 1500, 1580, 1628
MslI	CAYNNNNRTG	2 cut(s)	900, 1682
MunI	CAATTG	2 cut(s)	451, 1254
MvaI	CCWGG	3 cut(s)	335, 1493, 1691
MvnI	CGCG	1 cut(s)	447
MwoI	GCNNNNNNNGC	2 cut(s)	428, 1706
NaeI	GCCGGC	1 cut(s)	667
NciI	CCSGG	8 cut(s)	104, 461, 527, 563, 653, 1240, 1241, 1778
NdeII	GATC	5 cut(s)	365, 594, 1550, 1615, 1645
NgoMIV	GCCGGC	1 cut(s)	665
NlaIII	CATG	6 cut(s)	439, 995, 1054, 1277, 1447, 1595
NlaIV	GGNNCC	6 cut(s)	137, 396, 1357, 1358, 1430, 1605
NmeAIII	GCCGAG	2 cut(s)	279, 303
NmuCI	GTSAC	2 cut(s)	172, 1258
NspV	TTCGAA	1 cut(s)	1521
OliI	CACNNNNGTG	1 cut(s)	900
PaeR7I	CTCGAG	1 cut(s)	492
PagI	TCATGA	1 cut(s)	1273
PciSI	GCTCTTC	1 cut(s)	1593
PcsI	WCGNNNNNNNCGW	1 cut(s)	931
PdiI	GCCGGC	1 cut(s)	667
PdmI	GAANNNNTTC	1 cut(s)	1218
PfeI	GAWTC	5 cut(s)	262, 442, 764, 977, 1289
PflFI	GACNNNGTC	2 cut(s)	170, 1075
PfoI	TCCNGGA	2 cut(s)	459, 651
PkrI	GCNGC	9 cut(s)	160, 414, 433, 516, 534, 537, 603, 671, 955
Ple19I	CGATCG	1 cut(s)	597
PleI	GAGTC	3 cut(s)	161, 236, 484
PpsI	GAGTC	3 cut(s)	161, 236, 484
Psp6I	CCWGG	3 cut(s)	333, 1491, 1689
PspFI	CCCAGC	1 cut(s)	139
PspGI	CCWGG	3 cut(s)	333, 1491, 1689
PspN4I	GGNNCC	6 cut(s)	137, 396, 1357, 1358, 1430, 1605
PspOMI	GGGCCC	1 cut(s)	1356
PspPI	GGNCC	9 cut(s)	302, 331, 523, 599, 1237, 1356, 1357, 1604, 1687
PspXI	VCTCGAGB	1 cut(s)	492
PsuI	RGATCY	1 cut(s)	365
PsyI	GACNNNGTC	2 cut(s)	170, 1075
PvuI	CGATCG	1 cut(s)	597
RsaI	GTAC	4 cut(s)	298, 348, 509, 1092
RsaNI	GTAC	4 cut(s)	297, 347, 508, 1091
RseI	CAYNNNNRTG	2 cut(s)	900, 1682
SapI	GCTCTTC	1 cut(s)	1593
SaqAI	TTAA	8 cut(s)	180, 785, 824, 1298, 1488, 1500, 1580, 1628
SatI	GCNGC	9 cut(s)	159, 413, 432, 515, 533, 536, 602, 670, 954
Sau3AI	GATC	5 cut(s)	365, 594, 1550, 1615, 1645
Sau96I	GGNCC	9 cut(s)	302, 331, 523, 599, 1237, 1356, 1357, 1604, 1687
ScaI	AGTACT	2 cut(s)	509, 1092
SchI	GAGTC	3 cut(s)	161, 236, 484
SduI	GDGCHC	2 cut(s)	649, 1360
SfaNI	GCATC	3 cut(s)	196, 996, 1029
Sfr274I	CTCGAG	1 cut(s)	492
SfuI	TTCGAA	1 cut(s)	1521
SinI	GGWCC	3 cut(s)	331, 523, 1604
SlaI	CTCGAG	1 cut(s)	492
SmaI	CCCGGG	1 cut(s)	1241
SmiMI	CAYNNNNRTG	2 cut(s)	900, 1682
SmlI	CTYRAG	2 cut(s)	492, 1043
SmoI	CTYRAG	2 cut(s)	492, 1043
Sse9I	AATT	8 cut(s)	192, 451, 605, 821, 1254, 1390, 1404, 1744
SspMI	CTAG	4 cut(s)	288, 1097, 1701, 1730
StyI	CCWWGG	1 cut(s)	405
TaaI	ACNGT	9 cut(s)	122, 151, 178, 223, 271, 818, 1421, 1517, 1718
TaiI	ACGT	4 cut(s)	546, 714, 749, 1211
TaqI	TCGA	7 cut(s)	165, 351, 493, 593, 728, 1521, 1618
TaqII	GACCGA	1 cut(s)	1543
TasI	AATT	8 cut(s)	192, 451, 605, 821, 1254, 1390, 1404, 1744
TatI	WGTACW	2 cut(s)	507, 1090
TauI	GCSGC	6 cut(s)	161, 434, 517, 538, 604, 672
TfiI	GAWTC	5 cut(s)	262, 442, 764, 977, 1289
Tru1I	TTAA	8 cut(s)	180, 785, 824, 1298, 1488, 1500, 1580, 1628
Tru9I	TTAA	8 cut(s)	180, 785, 824, 1298, 1488, 1500, 1580, 1628
TscAI	CASTG	4 cut(s)	1206, 1443, 1534, 1723
TseFI	GTSAC	2 cut(s)	172, 1258
TseI	GCWGC	3 cut(s)	412, 532, 953
Tsp45I	GTSAC	2 cut(s)	172, 1258
TspGWI	ACGGA	3 cut(s)	160, 749, 1421
TspMI	CCCGGG	1 cut(s)	1239
TspRI	CASTG	4 cut(s)	1206, 1443, 1534, 1723
Tth111I	GACNNNGTC	2 cut(s)	170, 1075
VpaK11BI	GGWCC	3 cut(s)	331, 523, 1604
XapI	RAATTY	3 cut(s)	192, 1390, 1404
XbaI	TCTAGA	2 cut(s)	1096, 1729
XhoI	CTCGAG	1 cut(s)	492
XmaI	CCCGGG	1 cut(s)	1239
XmiI	GTMKAC	1 cut(s)	1509
XmnI	GAANNNNTTC	1 cut(s)	1218
XspI	CTAG	4 cut(s)	288, 1097, 1701, 1730
ZraI	GACGTC	1 cut(s)	747
ZrmI	AGTACT	2 cut(s)	509, 1092

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.