U-box domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_roxburghii | Rroxscaffold_6G00400390 |
| rosa_samantha | Rh1DG361600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 1 cut(s) | 19 |
| AflIII | ACRYGT | 1 cut(s) | 154 |
| AgsI | TTSAA | 1 cut(s) | 146 |
| AjnI | CCWGG | 2 cut(s) | 105, 120 |
| AluBI | AGCT | 2 cut(s) | 27, 127 |
| AluI | AGCT | 2 cut(s) | 27, 127 |
| Alw26I | GTCTC | 1 cut(s) | 182 |
| ApeKI | GCWGC | 1 cut(s) | 223 |
| BbvI | GCAGC | 1 cut(s) | 210 |
| BciT130I | CCWGG | 2 cut(s) | 107, 122 |
| BcoDI | GTCTC | 1 cut(s) | 182 |
| BfaI | CTAG | 2 cut(s) | 15, 128 |
| BisI | GCNGC | 1 cut(s) | 224 |
| BlsI | GCNGC | 1 cut(s) | 225 |
| BmcAI | AGTACT | 1 cut(s) | 19 |
| Bme1390I | CCNGG | 2 cut(s) | 107, 122 |
| BmrFI | CCNGG | 2 cut(s) | 107, 122 |
| BmsI | GCATC | 2 cut(s) | 74, 187 |
| BpmI | CTGGAG | 1 cut(s) | 143 |
| Bse1I | ACTGG | 1 cut(s) | 43 |
| Bse3DI | GCAATG | 1 cut(s) | 180 |
| BseBI | CCWGG | 2 cut(s) | 107, 122 |
| BseGI | GGATG | 1 cut(s) | 65 |
| BseMI | GCAATG | 1 cut(s) | 180 |
| BseMII | CTCAG | 4 cut(s) | 87, 90, 128, 163 |
| BseNI | ACTGG | 1 cut(s) | 43 |
| BseXI | GCAGC | 1 cut(s) | 210 |
| BsmAI | GTCTC | 1 cut(s) | 182 |
| BspCNI | CTCAG | 4 cut(s) | 86, 91, 129, 162 |
| BsrDI | GCAATG | 1 cut(s) | 180 |
| BsrI | ACTGG | 1 cut(s) | 43 |
| Bst2UI | CCWGG | 2 cut(s) | 107, 122 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 223 |
| BstDEI | CTNAG | 4 cut(s) | 73, 99, 137, 149 |
| BstF5I | GGATG | 1 cut(s) | 65 |
| BstMAI | GTCTC | 1 cut(s) | 182 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 223 |
| BstNI | CCWGG | 2 cut(s) | 107, 122 |
| BstNSI | RCATGY | 1 cut(s) | 158 |
| BstSCI | CCNGG | 2 cut(s) | 105, 120 |
| BstV1I | GCAGC | 1 cut(s) | 210 |
| BtsCI | GGATG | 1 cut(s) | 65 |
| Csp6I | GTAC | 1 cut(s) | 18 |
| CviAII | CATG | 2 cut(s) | 48, 155 |
| CviJI | RGCY | 5 cut(s) | 27, 105, 127, 179, 223 |
| CviKI_1 | RGCY | 5 cut(s) | 27, 105, 127, 179, 223 |
| CviQI | GTAC | 1 cut(s) | 18 |
| DdeI | CTNAG | 4 cut(s) | 73, 99, 137, 149 |
| EcoRII | CCWGG | 2 cut(s) | 105, 120 |
| FaeI | CATG | 2 cut(s) | 51, 158 |
| FaiI | YATR | 3 cut(s) | 49, 156, 171 |
| FatI | CATG | 2 cut(s) | 47, 154 |
| Fnu4HI | GCNGC | 1 cut(s) | 224 |
| FokI | GGATG | 1 cut(s) | 52 |
| Fsp4HI | GCNGC | 1 cut(s) | 224 |
| FspBI | CTAG | 2 cut(s) | 15, 128 |
| GluI | GCNGC | 1 cut(s) | 224 |
| GsuI | CTGGAG | 1 cut(s) | 143 |
| Hin1II | CATG | 2 cut(s) | 51, 158 |
| HindIII | AAGCTT | 1 cut(s) | 25 |
| HinfI | GANTC | 1 cut(s) | 4 |
| Hpy188I | TCNGA | 5 cut(s) | 58, 76, 100, 152, 207 |
| HpyAV | CCTTC | 1 cut(s) | 205 |
| HpyCH4V | TGCA | 2 cut(s) | 173, 217 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 223 |
| HpyF3I | CTNAG | 4 cut(s) | 73, 99, 137, 149 |
| Hsp92II | CATG | 2 cut(s) | 51, 158 |
| LmnI | GCTCC | 1 cut(s) | 124 |
| LpnPI | CCDG | 5 cut(s) | 56, 92, 107, 119, 134 |
| Lsp1109I | GCAGC | 1 cut(s) | 210 |
| LweI | GCATC | 2 cut(s) | 74, 187 |
| MaeI | CTAG | 2 cut(s) | 15, 128 |
| MaeIII | GTNAC | 2 cut(s) | 5, 31 |
| MboII | GAAGA | 1 cut(s) | 220 |
| MluCI | AATT | 2 cut(s) | 88, 141 |
| MlyI | GAGTC | 1 cut(s) | 13 |
| MnlI | CCTC | 2 cut(s) | 22, 82 |
| MseI | TTAA | 1 cut(s) | 84 |
| MspR9I | CCNGG | 2 cut(s) | 107, 122 |
| MvaI | CCWGG | 2 cut(s) | 107, 122 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 223 |
| NlaIII | CATG | 2 cut(s) | 51, 158 |
| NmuCI | GTSAC | 1 cut(s) | 5 |
| NspI | RCATGY | 1 cut(s) | 158 |
| PciI | ACATGT | 1 cut(s) | 154 |
| PkrI | GCNGC | 1 cut(s) | 225 |
| PleI | GAGTC | 1 cut(s) | 12 |
| PpsI | GAGTC | 1 cut(s) | 12 |
| PscI | ACATGT | 1 cut(s) | 154 |
| Psp6I | CCWGG | 2 cut(s) | 105, 120 |
| PspGI | CCWGG | 2 cut(s) | 105, 120 |
| RsaI | GTAC | 1 cut(s) | 19 |
| RsaNI | GTAC | 1 cut(s) | 18 |
| SaqAI | TTAA | 1 cut(s) | 84 |
| SatI | GCNGC | 1 cut(s) | 224 |
| ScaI | AGTACT | 1 cut(s) | 19 |
| SchI | GAGTC | 1 cut(s) | 13 |
| ScrFI | CCNGG | 2 cut(s) | 107, 122 |
| SetI | ASST | 6 cut(s) | 29, 74, 111, 123, 129, 216 |
| SfaNI | GCATC | 2 cut(s) | 74, 187 |
| Sse9I | AATT | 2 cut(s) | 88, 141 |
| SspMI | CTAG | 2 cut(s) | 15, 128 |
| StyD4I | CCNGG | 2 cut(s) | 105, 120 |
| TaqI | TCGA | 1 cut(s) | 22 |
| TasI | AATT | 2 cut(s) | 88, 141 |
| TatI | WGTACW | 1 cut(s) | 17 |
| Tru1I | TTAA | 1 cut(s) | 84 |
| Tru9I | TTAA | 1 cut(s) | 84 |
| TseFI | GTSAC | 1 cut(s) | 5 |
| TseI | GCWGC | 1 cut(s) | 223 |
| Tsp45I | GTSAC | 1 cut(s) | 5 |
| TspDTI | ATGAA | 1 cut(s) | 84 |
| XceI | RCATGY | 1 cut(s) | 158 |
| XspI | CTAG | 2 cut(s) | 15, 128 |
| ZrmI | AGTACT | 1 cut(s) | 19 |