U-box domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_roxburghii | Rroxscaffold_6G00400390 |
| rosa_samantha | Rh1DG361600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 207 |
| AclWI | GGATC | 1 cut(s) | 42 |
| AflIII | ACRYGT | 1 cut(s) | 148 |
| AgsI | TTSAA | 3 cut(s) | 91, 101, 140 |
| AjnI | CCWGG | 1 cut(s) | 114 |
| AluBI | AGCT | 3 cut(s) | 15, 94, 121 |
| AluI | AGCT | 3 cut(s) | 15, 94, 121 |
| Alw26I | GTCTC | 1 cut(s) | 176 |
| AlwI | GGATC | 1 cut(s) | 42 |
| ApeKI | GCWGC | 2 cut(s) | 12, 81 |
| BbvI | GCAGC | 2 cut(s) | 24, 93 |
| BciT130I | CCWGG | 1 cut(s) | 116 |
| BcoDI | GTCTC | 1 cut(s) | 176 |
| BfaI | CTAG | 1 cut(s) | 122 |
| BisI | GCNGC | 2 cut(s) | 13, 82 |
| BlsI | GCNGC | 2 cut(s) | 14, 83 |
| Bme1390I | CCNGG | 1 cut(s) | 116 |
| BmrFI | CCNGG | 1 cut(s) | 116 |
| BmsI | GCATC | 2 cut(s) | 68, 181 |
| BpmI | CTGGAG | 1 cut(s) | 137 |
| Bse3DI | GCAATG | 1 cut(s) | 174 |
| BseBI | CCWGG | 1 cut(s) | 116 |
| BseMI | GCAATG | 1 cut(s) | 174 |
| BseMII | CTCAG | 2 cut(s) | 122, 157 |
| BseXI | GCAGC | 2 cut(s) | 24, 93 |
| BsmAI | GTCTC | 1 cut(s) | 176 |
| Bsp143I | GATC | 2 cut(s) | 27, 34 |
| BspCNI | CTCAG | 2 cut(s) | 123, 156 |
| BspPI | GGATC | 1 cut(s) | 42 |
| BsrDI | GCAATG | 1 cut(s) | 174 |
| BssMI | GATC | 2 cut(s) | 27, 34 |
| BssNAI | GTATAC | 1 cut(s) | 208 |
| Bst1107I | GTATAC | 1 cut(s) | 208 |
| Bst2UI | CCWGG | 1 cut(s) | 116 |
| BstDEI | CTNAG | 2 cut(s) | 131, 143 |
| BstKTI | GATC | 2 cut(s) | 30, 37 |
| BstMAI | GTCTC | 1 cut(s) | 176 |
| BstMBI | GATC | 2 cut(s) | 27, 34 |
| BstNI | CCWGG | 1 cut(s) | 116 |
| BstNSI | RCATGY | 1 cut(s) | 152 |
| BstSCI | CCNGG | 1 cut(s) | 114 |
| BstV1I | GCAGC | 2 cut(s) | 24, 93 |
| BstX2I | RGATCY | 1 cut(s) | 34 |
| BstYI | RGATCY | 1 cut(s) | 34 |
| BstZ17I | GTATAC | 1 cut(s) | 208 |
| CviAII | CATG | 1 cut(s) | 149 |
| CviJI | RGCY | 4 cut(s) | 15, 94, 121, 173 |
| CviKI_1 | RGCY | 4 cut(s) | 15, 94, 121, 173 |
| DdeI | CTNAG | 2 cut(s) | 131, 143 |
| DpnI | GATC | 2 cut(s) | 29, 36 |
| DpnII | GATC | 2 cut(s) | 27, 34 |
| EcoRII | CCWGG | 1 cut(s) | 114 |
| FaeI | CATG | 1 cut(s) | 152 |
| FaiI | YATR | 5 cut(s) | 48, 150, 165, 208, 216 |
| FatI | CATG | 1 cut(s) | 148 |
| FblI | GTMKAC | 1 cut(s) | 207 |
| Fnu4HI | GCNGC | 2 cut(s) | 13, 82 |
| Fsp4HI | GCNGC | 2 cut(s) | 13, 82 |
| FspBI | CTAG | 1 cut(s) | 122 |
| GluI | GCNGC | 2 cut(s) | 13, 82 |
| GsuI | CTGGAG | 1 cut(s) | 137 |
| Hin1II | CATG | 1 cut(s) | 152 |
| Hpy166II | GTNNAC | 1 cut(s) | 208 |
| Hpy188I | TCNGA | 2 cut(s) | 146, 201 |
| Hpy8I | GTNNAC | 1 cut(s) | 208 |
| HpyAV | CCTTC | 2 cut(s) | 77, 196 |
| HpyCH4V | TGCA | 3 cut(s) | 12, 81, 167 |
| HpyF3I | CTNAG | 2 cut(s) | 131, 143 |
| Hsp92II | CATG | 1 cut(s) | 152 |
| Kzo9I | GATC | 2 cut(s) | 27, 34 |
| LmnI | GCTCC | 1 cut(s) | 118 |
| LpnPI | CCDG | 2 cut(s) | 101, 128 |
| Lsp1109I | GCAGC | 2 cut(s) | 24, 93 |
| LweI | GCATC | 2 cut(s) | 68, 181 |
| MaeI | CTAG | 1 cut(s) | 122 |
| MalI | GATC | 2 cut(s) | 29, 36 |
| MboI | GATC | 2 cut(s) | 27, 34 |
| MflI | RGATCY | 1 cut(s) | 34 |
| MluCI | AATT | 1 cut(s) | 135 |
| MspR9I | CCNGG | 1 cut(s) | 116 |
| MvaI | CCWGG | 1 cut(s) | 116 |
| NdeII | GATC | 2 cut(s) | 27, 34 |
| NlaIII | CATG | 1 cut(s) | 152 |
| NspI | RCATGY | 1 cut(s) | 152 |
| PciI | ACATGT | 1 cut(s) | 148 |
| PkrI | GCNGC | 2 cut(s) | 14, 83 |
| PscI | ACATGT | 1 cut(s) | 148 |
| Psp6I | CCWGG | 1 cut(s) | 114 |
| PspGI | CCWGG | 1 cut(s) | 114 |
| PsuI | RGATCY | 1 cut(s) | 34 |
| SatI | GCNGC | 2 cut(s) | 13, 82 |
| Sau3AI | GATC | 2 cut(s) | 27, 34 |
| ScrFI | CCNGG | 1 cut(s) | 116 |
| SetI | ASST | 5 cut(s) | 17, 96, 117, 123, 207 |
| SfaNI | GCATC | 2 cut(s) | 68, 181 |
| SgeI | CNNG | 8 cut(s) | 43, 103, 113, 127, 128, 134, 161, 210 |
| Sse9I | AATT | 1 cut(s) | 135 |
| SspMI | CTAG | 1 cut(s) | 122 |
| StyD4I | CCNGG | 1 cut(s) | 114 |
| TasI | AATT | 1 cut(s) | 135 |
| TseI | GCWGC | 2 cut(s) | 12, 81 |
| TspDTI | ATGAA | 1 cut(s) | 35 |
| XceI | RCATGY | 1 cut(s) | 152 |
| XmiI | GTMKAC | 1 cut(s) | 207 |
| XspI | CTAG | 1 cut(s) | 122 |