Rorug02G0134300
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0006491
Physical Location & Seq
Forward (+)
11567594 .. 11569525
1932 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0134300.1

Sequence Viewer

Length: 1932 bp
ATGCAAAACCTCTCTCGCAAATTCTCAACTCTCCCAATTCCCAAGCTTTCACCTTCACACCCCTTCACCCCATACTCTGAGATTCAGCATTGCCGGAAAATCTTAGAGCACAAAATCATTACTATTCTAGACGTGTGCAACACCCTCAACCATGTCAAGCAGGTTCACGCTCACGTCATCGGAAATGGGCTCAGCCAATACAGCTACGTCATCACCAAGCTCGTCCGCACGCTCACCAAGCTCGGAGTCCCAATGCCCACCTACCCGGAACTCGTCTTCCGGCAGGTGTTGCACCCGAACCCGTTTCTCTGGGCGGCTATGATTAGAGGGTGTGCAATTGAAGGAACTGTTTCTGAAGCGGTCAAGTATTACACTTTGATGAGGAGGGAGGGCACTGGGCCGGTTTCGTTTACGTTCTCGGCGCTGTTCAAGGCCTGTGGGAGTGGTCTGGATGTGAACTTGGGCCGGCAGATACATGCGCAGACGGTTTTGATCGGTGGGTTTGTGGCGGATTTGTACGTGGGGAACACTATGATTGATATGTATTTGAAGTGTGGGTTTCTGGATTGTGGGCGCAAGGTGTTTGATGAAATGCCTGAGAGGGATGTGGTTTCGTGGACCGAGTTGATTGTGGCGTATGCCAAGAGTGGGGATATGGAGTCGGCGAGGGACTTGTTTGAGGATTTGAGTTTGAAAGATATGGTGGTGTGGACGGCTATGGTTACTGGTTATGCCCAGAATTCGATGCCGAAAGAGGCGTTGGATTGCTTTGAGAGAATGCGAGGTGCTGGTGTAGGGCTCGATGAGGTTGCATTGCTCGGGGTCATTTCGGCTTGTGCACAATTGGGTGCTTCCAGGTATGCTAATTGGGTTCGAGCCATTGCTGAGGAATCTGGTTTTGGGGCAACTCAGAATGTGCTTGTGGGATCTGCATTGATAGATATGTTCTCCAAGTGTGGGAGCTTGGATGATGCATACAATATTTTTCAGGGGATGAAGCAAAGGAATGTGTTTTCTTATAGCTCGATGATTTGGGGATTTGCAGTGCATGGAAATGCCAATGCAGCGATAGGATTGTTTCATGAGATGCTGACCACTGATGTAAGGCCGAACCAGGTTACTTTTATAGGTGTGCTAACTGCCTGCAGCCACGCGGGGATGGTTGATCAAGGTCGGCAGTTATTTGCAACGATGGAGAAGTATTACAATGTCACTCCATCAGCTGGTCATTACACTTGTATGGTAGACTTGCTTGGTCGAGCTGGGCGCTTGGAAGAAGCTCTCGAGCTAGCTGAGACAATGCCGATAGTCGCACATGGAGGTGTGTGGGGAGCACTACTTGGTGCGTGCCGTATCCATAAGAACCCCGACATTGCTCAAATTGCTGCCAGCCATCTATTTGAGCTTGAACCTAATAATATTGGAAACTATGTGATGCTCTCCAACATATATGCATCAGCAGGAAGGTGGGATGATGTTTCAAGTGTTAGGAAGCTGATGAGAGAAAAGGGTCTGAAAAAAAACCCTGCATATAGCTGGGTTGAAACAAAGAACGGACACGAAAAGTTTTGTGCAGGTGAAACGAGTCACCCCGAATACAACAAGATTAAGAAGGCGTTGGAGGATCTTCTAAACAGATTGCAGGATCTTGGCTATAGGCCAAACCTAAATTCGGTGGATTATGATGTGGGGGATGAAGAAAAGATGCGTATATTGATGGCTCATAGCGAAAAACTGGCTTTGGCATACGCATTGCTCTACGCAGATTCTGGTTCCACCATTAAGATCGCCAAGAACATAAGGATTTGTGAAGACTGTCACGCCTTCATGTGTGGTGCATCACGGGTTACAGGAAGGCATATTATTGTCAGAGATAACATGAGATTCCACCACTTCGAAAATGGGACTTGTAATTGCGGCAACTTTTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000022 GO:0000070 GO:0000226 GO:0000278 GO:0000280 GO:0000281 GO:0000819 GO:0000910 GO:0002376 GO:0002478 GO:0002495 GO:0002504 GO:0003674 GO:0003676 GO:0003677 GO:0003774 GO:0003777 GO:0003824 GO:0005488 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005737 GO:0005819 GO:0005829 GO:0005856 GO:0005871 GO:0005874 GO:0005875 GO:0005876 GO:0006355 GO:0006810 GO:0006890 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007049 GO:0007051 GO:0007052 GO:0007059 GO:0008088 GO:0008089 GO:0008150 GO:0008574 GO:0009664 GO:0009832 GO:0009889 GO:0009891 GO:0009893 GO:0009937 GO:0009966 GO:0009987 GO:0010215 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0010646 GO:0010970 GO:0015630 GO:0016043 GO:0016192 GO:0016363 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019219 GO:0019222 GO:0019882 GO:0019884 GO:0019886 GO:0022402 GO:0022607 GO:0023051 GO:0030198 GO:0030496 GO:0030705 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032991 GO:0034399 GO:0042127 GO:0042546 GO:0042623 GO:0043062 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0044085 GO:0044421 GO:0044422 GO:0044424 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0045171 GO:0045229 GO:0045893 GO:0045935 GO:0046907 GO:0048002 GO:0048193 GO:0048285 GO:0048518 GO:0048522 GO:0048583 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051179 GO:0051225 GO:0051231 GO:0051234 GO:0051252 GO:0051254 GO:0051255 GO:0051256 GO:0051276 GO:0051301 GO:0051641 GO:0051649 GO:0060255 GO:0061640 GO:0065007 GO:0070013 GO:0070726 GO:0070925 GO:0071554 GO:0071555 GO:0071668 GO:0071669 GO:0071840 GO:0080090 GO:0090307 GO:0097159 GO:0098813 GO:0098930 GO:0099080 GO:0099081 GO:0099111 GO:0099512 GO:0099513 GO:0140014 GO:1901363 GO:1902680 GO:1902850 GO:1903047 GO:1903506 GO:1903508 GO:1990939 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Kinesin

Protein Analysis

643

Amino Acids

71.42

Weight (kDa)

6.88

Isoelectric Point (pI)

31.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR PF01535 235 - 265 3.4e-07 PPR repeat
PPR_2 PF13041 335 - 383 1.7e-08 PPR repeat family
E_motif PF20431 453 - 515 1.3e-21 E motif
DYW_deaminase PF14432 551 - 643 1.7e-40 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 274, 1565
Acc16I TGCGCA 1 cut(s) 480
Acc36I ACCTGC 3 cut(s) 151, 274, 1565
AccB7I CCANNNNNTGG 1 cut(s) 1223
AccI GTMKAC 1 cut(s) 1245
AccII CGCG 1 cut(s) 1154
AciI CCGC 6 cut(s) 226, 314, 359, 509, 1154, 1917
AclWI GGATC 3 cut(s) 934, 1632, 1653
AcsI RAATTY 3 cut(s) 20, 739, 1669
AcuI CTGAAG 1 cut(s) 375
AfaI GTAC 1 cut(s) 518
AfiI CCNNNNNNNGG 4 cut(s) 648, 957, 1223, 1672
AflIII ACRYGT 1 cut(s) 132
AgsI TTSAA 7 cut(s) 341, 430, 550, 694, 1409, 1482, 1544
AjiI CACGTC 2 cut(s) 133, 175
AjnI CCWGG 2 cut(s) 854, 1113
AjuI GAANNNNNNNTTGG 6 cut(s) 743, 775, 882, 914, 1654, 1686
AloI GAACNNNNNNTCC 2 cut(s) 261, 293
Alw21I GWGCWC 3 cut(s) 111, 841, 1336
Alw26I GTCTC 1 cut(s) 1289
Alw44I GTGCAC 1 cut(s) 837
AlwI GGATC 3 cut(s) 934, 1632, 1653
AlwNI CAGNNNCTG 1 cut(s) 1769
Ama87I CYCGRG 2 cut(s) 818, 1283
AoxI GGCC 5 cut(s) 398, 432, 463, 1106, 1658
ApaLI GTGCAC 1 cut(s) 837
ApeKI GCWGC 3 cut(s) 1064, 1146, 1385
ApoI RAATTY 3 cut(s) 20, 739, 1669
Asp700I GAANNNNTTC 1 cut(s) 349
AspLEI GCGC 4 cut(s) 424, 481, 576, 1269
AspS9I GGNCC 3 cut(s) 398, 463, 618
AsuC2I CCSGG 1 cut(s) 266
AsuHPI GGTGA 6 cut(s) 42, 58, 205, 226, 1580, 1589
AsuII TTCGAA 1 cut(s) 1896
AsuNHI GCTAGC 1 cut(s) 1288
AvaI CYCGRG 2 cut(s) 818, 1283
AvaII GGWCC 1 cut(s) 618
BaeGI GKGCMC 2 cut(s) 395, 841
BanII GRGCYC 2 cut(s) 192, 801
BbsI GAAGAC 2 cut(s) 268, 1818
Bbv12I GWGCWC 3 cut(s) 111, 841, 1336
BbvCI CCTCAGC 1 cut(s) 885
BbvI GCAGC 3 cut(s) 1076, 1158, 1372
BccI CCATC 5 cut(s) 1153, 1186, 1225, 1401, 1711
BceAI ACGGC 2 cut(s) 729, 1335
BcgI CGANNNNNNTGC 2 cut(s) 791, 825
BciT130I CCWGG 2 cut(s) 856, 1115
BciVI GTATCC 1 cut(s) 1364
BclI TGATCA 1 cut(s) 1165
BcnI CCSGG 1 cut(s) 266
BcoDI GTCTC 1 cut(s) 1289
BfaI CTAG 2 cut(s) 128, 1289
BfmI CTRYAG 2 cut(s) 1144, 1654
BfoI RGCGCY 2 cut(s) 425, 1270
BfuAI ACCTGC 3 cut(s) 151, 274, 1565
BfuI GTATCC 1 cut(s) 1364
BisI GCNGC 5 cut(s) 315, 1065, 1147, 1386, 1918
BlpI GCTNAGC 1 cut(s) 191
BlsI GCNGC 5 cut(s) 316, 1066, 1148, 1387, 1919
Bme1390I CCNGG 3 cut(s) 266, 856, 1115
Bme18I GGWCC 1 cut(s) 618
BmeT110I CYCGRG 2 cut(s) 818, 1283
BmgBI CACGTC 2 cut(s) 133, 175
BmgT120I GGNCC 3 cut(s) 398, 463, 618
BmiI GGNNCC 1 cut(s) 1774
BmrFI CCNGG 3 cut(s) 266, 856, 1115
BmrI ACTGGG 1 cut(s) 405
BmsI GCATC 7 cut(s) 735, 961, 1077, 1425, 1463, 1695, 1847
BmtI GCTAGC 1 cut(s) 1292
BmuI ACTGGG 1 cut(s) 405
BpiI GAAGAC 2 cut(s) 268, 1818
Bpu10I CCTNAGC 1 cut(s) 885
Bpu1102I GCTNAGC 1 cut(s) 191
Bpu14I TTCGAA 1 cut(s) 1896
BpuMI CCSGG 1 cut(s) 266
BsaAI YACGTR 1 cut(s) 520
Bsc4I CCNNNNNNNGG 4 cut(s) 648, 957, 1223, 1672
Bse118I RCCGGY 2 cut(s) 400, 465
Bse1I ACTGG 3 cut(s) 400, 730, 1740
Bse3DI GCAATG 5 cut(s) 88, 812, 879, 1371, 1751
BseBI CCWGG 2 cut(s) 856, 1115
BseGI GGATG 7 cut(s) 457, 610, 973, 999, 1164, 1477, 1699
BseLI CCNNNNNNNGG 4 cut(s) 648, 957, 1223, 1672
BseMI GCAATG 5 cut(s) 88, 812, 879, 1371, 1751
BseMII CTCAG 6 cut(s) 69, 205, 588, 876, 923, 1284
BseNI ACTGG 3 cut(s) 400, 730, 1740
BseRI GAGGAG 1 cut(s) 397
BseSI GKGCMC 2 cut(s) 395, 841
BseXI GCAGC 3 cut(s) 1076, 1158, 1372
BseYI CCCAGC 2 cut(s) 1262, 1536
BsgI GTGCAG 1 cut(s) 1593
Bsh1236I CGCG 1 cut(s) 1154
BshFI GGCC 5 cut(s) 400, 434, 465, 1108, 1660
BsiHKAI GWGCWC 3 cut(s) 111, 841, 1336
BsiHKCI CYCGRG 2 cut(s) 818, 1283
BsiSI CCGG 5 cut(s) 94, 266, 280, 401, 466
BslFI GGGAC 3 cut(s) 233, 683, 1918
BslI CCNNNNNNNGG 4 cut(s) 648, 957, 1223, 1672
BsmAI GTCTC 1 cut(s) 1289
BsmFI GGGAC 3 cut(s) 233, 683, 1918
BsmI GAATGC 1 cut(s) 783
BsnI GGCC 5 cut(s) 400, 434, 465, 1108, 1660
BsoBI CYCGRG 2 cut(s) 818, 1283
Bsp119I TTCGAA 1 cut(s) 1896
Bsp1286I GDGCHC 6 cut(s) 111, 192, 395, 801, 841, 1336
Bsp143I GATC 6 cut(s) 492, 926, 1165, 1624, 1645, 1785
Bsp1720I GCTNAGC 1 cut(s) 191
BspACI CCGC 6 cut(s) 226, 314, 359, 509, 1154, 1917
BspANI GGCC 5 cut(s) 400, 434, 465, 1108, 1660
BspCNI CTCAG 6 cut(s) 70, 204, 589, 877, 922, 1285
BspFNI CGCG 1 cut(s) 1154
BspHI TCATGA 1 cut(s) 1081
BspLI GGNNCC 1 cut(s) 1774
BspMAI CTGCAG 1 cut(s) 1148
BspMI ACCTGC 3 cut(s) 151, 274, 1565
BspOI GCTAGC 1 cut(s) 1292
BspPI GGATC 3 cut(s) 934, 1632, 1653
BspT104I TTCGAA 1 cut(s) 1896
BsrDI GCAATG 5 cut(s) 88, 812, 879, 1371, 1751
BsrFI RCCGGY 2 cut(s) 400, 465
BsrI ACTGG 3 cut(s) 400, 730, 1740
BssAI RCCGGY 2 cut(s) 400, 465
BssMI GATC 6 cut(s) 492, 926, 1165, 1624, 1645, 1785
Bst2UI CCWGG 2 cut(s) 856, 1115
Bst4CI ACNGT 3 cut(s) 349, 487, 1817
BstAPI GCANNNNNTGC 1 cut(s) 289
BstBAI YACGTR 1 cut(s) 520
BstBI TTCGAA 1 cut(s) 1896
BstC8I GCNNGC 6 cut(s) 230, 467, 1144, 1290, 1348, 1390
BstDEI CTNAG 7 cut(s) 78, 103, 191, 597, 885, 909, 1293
BstF5I GGATG 7 cut(s) 457, 610, 973, 999, 1164, 1477, 1699
BstFNI CGCG 1 cut(s) 1154
BstH2I RGCGCY 2 cut(s) 425, 1270
BstHHI GCGC 4 cut(s) 424, 481, 576, 1269
BstKTI GATC 6 cut(s) 495, 929, 1168, 1627, 1648, 1788
BstMAI GTCTC 1 cut(s) 1289
BstMBI GATC 6 cut(s) 492, 926, 1165, 1624, 1645, 1785
BstMWI GCNNNNNNNGC 5 cut(s) 201, 238, 289, 1064, 1382
BstNI CCWGG 2 cut(s) 856, 1115
BstNSI RCATGY 1 cut(s) 479
BstSCI CCNGG 3 cut(s) 264, 854, 1113
BstSFI CTRYAG 2 cut(s) 1144, 1654
BstSLI GKGCMC 2 cut(s) 395, 841
BstUI CGCG 1 cut(s) 1154
BstV1I GCAGC 3 cut(s) 1076, 1158, 1372
BstV2I GAAGAC 2 cut(s) 268, 1818
BstX2I RGATCY 3 cut(s) 926, 1624, 1645
BstYI RGATCY 3 cut(s) 926, 1624, 1645
BsuI GTATCC 1 cut(s) 1364
BsuRI GGCC 5 cut(s) 400, 434, 465, 1108, 1660
BtrI CACGTC 2 cut(s) 133, 175
BtsCI GGATG 7 cut(s) 457, 610, 973, 999, 1164, 1477, 1699
BtsI GCAGTG 1 cut(s) 1050
BtsIMutI CAGTG 3 cut(s) 393, 1050, 1095
BveI ACCTGC 3 cut(s) 151, 274, 1565
Cac8I GCNNGC 6 cut(s) 230, 467, 1144, 1290, 1348, 1390
CaiI CAGNNNCTG 1 cut(s) 1769
CciI TCATGA 1 cut(s) 1081
CfoI GCGC 4 cut(s) 424, 481, 576, 1269
Cfr10I RCCGGY 2 cut(s) 400, 465
Cfr13I GGNCC 3 cut(s) 398, 463, 618
CsiI ACCWGGT 1 cut(s) 1113
Csp6I GTAC 1 cut(s) 517
CspCI CAANNNNNGTGG 2 cut(s) 418, 453
CviAII CATG 7 cut(s) 152, 476, 1049, 1082, 1316, 1828, 1879
CviQI GTAC 1 cut(s) 517
DdeI CTNAG 7 cut(s) 78, 103, 191, 597, 885, 909, 1293
DpnI GATC 6 cut(s) 494, 928, 1167, 1626, 1647, 1787
DpnII GATC 6 cut(s) 492, 926, 1165, 1624, 1645, 1785
EciI GGCGGA 1 cut(s) 524
Eco147I AGGCCT 1 cut(s) 434
Eco24I GRGCYC 2 cut(s) 192, 801
Eco47I GGWCC 1 cut(s) 618
Eco57I CTGAAG 1 cut(s) 375
Eco88I CYCGRG 2 cut(s) 818, 1283
EcoRI GAATTC 1 cut(s) 739
EcoRII CCWGG 2 cut(s) 854, 1113
EcoT22I ATGCAT 2 cut(s) 976, 1456
EcoT38I GRGCYC 2 cut(s) 192, 801
FaeI CATG 7 cut(s) 155, 479, 1052, 1085, 1319, 1831, 1882
FaqI GGGAC 3 cut(s) 233, 683, 1918
FatI CATG 7 cut(s) 151, 475, 1048, 1081, 1315, 1827, 1878
FauI CCCGC 1 cut(s) 1147
FbaI TGATCA 1 cut(s) 1165
FblI GTMKAC 1 cut(s) 1245
Fnu4HI GCNGC 5 cut(s) 315, 1065, 1147, 1386, 1918
FokI GGATG 7 cut(s) 464, 617, 980, 1006, 1171, 1484, 1706
FriOI GRGCYC 2 cut(s) 192, 801
Fsp4HI GCNGC 5 cut(s) 315, 1065, 1147, 1386, 1918
FspBI CTAG 2 cut(s) 128, 1289
FspI TGCGCA 1 cut(s) 480
GlaI GCGC 4 cut(s) 423, 480, 575, 1268
GluI GCNGC 5 cut(s) 315, 1065, 1147, 1386, 1918
GsaI CCCAGC 2 cut(s) 1266, 1540
HaeII RGCGCY 2 cut(s) 425, 1270
HaeIII GGCC 5 cut(s) 400, 434, 465, 1108, 1660
HapII CCGG 5 cut(s) 94, 266, 280, 401, 466
HhaI GCGC 4 cut(s) 424, 481, 576, 1269
Hin1II CATG 7 cut(s) 155, 479, 1052, 1085, 1319, 1831, 1882
Hin6I GCGC 4 cut(s) 422, 479, 574, 1267
HinP1I GCGC 4 cut(s) 422, 479, 574, 1267
HindIII AAGCTT 1 cut(s) 44
HinfI GANTC 7 cut(s) 82, 246, 659, 890, 1585, 1766, 1884
HpaII CCGG 5 cut(s) 94, 266, 280, 401, 466
HphI GGTGA 6 cut(s) 42, 58, 205, 226, 1580, 1589
Hpy166II GTNNAC 7 cut(s) 166, 411, 457, 618, 711, 839, 1246
Hpy188I TCNGA 7 cut(s) 79, 182, 245, 355, 912, 1515, 1871
Hpy188III TCNNGA 5 cut(s) 128, 449, 563, 1082, 1283
Hpy8I GTNNAC 7 cut(s) 166, 411, 457, 618, 711, 839, 1246
HpyAV CCTTC 7 cut(s) 63, 73, 335, 1458, 1606, 1834, 1848
HpyCH4III ACNGT 3 cut(s) 349, 487, 1817
HpyCH4IV ACGT 5 cut(s) 132, 174, 207, 413, 519
HpyF10VI GCNNNNNNNGC 5 cut(s) 201, 238, 289, 1064, 1382
HpyF3I CTNAG 7 cut(s) 78, 103, 191, 597, 885, 909, 1293
HpySE526I ACGT 5 cut(s) 132, 174, 207, 413, 519
Hsp92II CATG 7 cut(s) 155, 479, 1052, 1085, 1319, 1831, 1882
HspAI GCGC 4 cut(s) 422, 479, 574, 1267
KroI GCCGGC 1 cut(s) 465
KroNI GCCGGC 1 cut(s) 467
Ksp22I TGATCA 1 cut(s) 1165
Kzo9I GATC 6 cut(s) 492, 926, 1165, 1624, 1645, 1785
LmnI GCTCC 2 cut(s) 960, 1331
Lsp1109I GCAGC 3 cut(s) 1076, 1158, 1372
LweI GCATC 7 cut(s) 735, 961, 1077, 1425, 1463, 1695, 1847
MabI ACCWGGT 1 cut(s) 1113
MaeI CTAG 2 cut(s) 128, 1289
MaeII ACGT 5 cut(s) 132, 174, 207, 413, 519
MaeIII GTNAC 6 cut(s) 721, 1117, 1210, 1586, 1817, 1846
MalI GATC 6 cut(s) 494, 928, 1167, 1626, 1647, 1787
MboI GATC 6 cut(s) 492, 926, 1165, 1624, 1645, 1785
MboII GAAGA 5 cut(s) 268, 1286, 1619, 1709, 1823
MfeI CAATTG 2 cut(s) 336, 842
MflI RGATCY 3 cut(s) 926, 1624, 1645
MhlI GDGCHC 6 cut(s) 111, 192, 395, 801, 841, 1336
MluCI AATT 9 cut(s) 20, 36, 336, 739, 842, 865, 1380, 1669, 1912
MlyI GAGTC 3 cut(s) 255, 668, 1594
MmeI TCCRAC 3 cut(s) 741, 1467, 1599
Mph1103I ATGCAT 2 cut(s) 976, 1456
MroNI GCCGGC 1 cut(s) 465
MroXI GAANNNNTTC 1 cut(s) 349
MseI TTAA 2 cut(s) 1608, 1782
MslI CAYNNNNRTG 4 cut(s) 377, 1053, 1238, 1320
MspA1I CMGCKG 1 cut(s) 1223
MspI CCGG 5 cut(s) 94, 266, 280, 401, 466
MspR9I CCNGG 3 cut(s) 266, 856, 1115
MunI CAATTG 2 cut(s) 336, 842
Mva1269I GAATGC 1 cut(s) 783
MvaI CCWGG 2 cut(s) 856, 1115
MvnI CGCG 1 cut(s) 1154
MwoI GCNNNNNNNGC 5 cut(s) 201, 238, 289, 1064, 1382
NaeI GCCGGC 1 cut(s) 467
NciI CCSGG 1 cut(s) 266
NdeII GATC 6 cut(s) 492, 926, 1165, 1624, 1645, 1785
NgoMIV GCCGGC 1 cut(s) 465
NheI GCTAGC 1 cut(s) 1288
NlaIII CATG 7 cut(s) 155, 479, 1052, 1085, 1319, 1831, 1882
NlaIV GGNNCC 1 cut(s) 1774
NmeAIII GCCGAG 1 cut(s) 398
NmuCI GTSAC 3 cut(s) 1210, 1586, 1817
NsbI TGCGCA 1 cut(s) 480
NsiI ATGCAT 2 cut(s) 976, 1456
NspI RCATGY 1 cut(s) 479
NspV TTCGAA 1 cut(s) 1896
PaeR7I CTCGAG 1 cut(s) 1283
PagI TCATGA 1 cut(s) 1081
PaqCI CACCTGC 2 cut(s) 274, 1565
PceI AGGCCT 1 cut(s) 434
PctI GAATGC 1 cut(s) 783
PdiI GCCGGC 1 cut(s) 467
PdmI GAANNNNTTC 1 cut(s) 349
PfeI GAWTC 4 cut(s) 82, 890, 1766, 1884
PflMI CCANNNNNTGG 1 cut(s) 1223
PkrI GCNGC 5 cut(s) 316, 1066, 1148, 1387, 1919
PleI GAGTC 3 cut(s) 254, 667, 1593
PpsI GAGTC 3 cut(s) 254, 667, 1593
Ppu21I YACGTR 1 cut(s) 520
Psp6I CCWGG 2 cut(s) 854, 1113
PspFI CCCAGC 2 cut(s) 1262, 1536
PspGI CCWGG 2 cut(s) 854, 1113
PspN4I GGNNCC 1 cut(s) 1774
PspPI GGNCC 3 cut(s) 398, 463, 618
PstI CTGCAG 1 cut(s) 1148
PstNI CAGNNNCTG 1 cut(s) 1769
PsuI RGATCY 3 cut(s) 926, 1624, 1645
PvuII CAGCTG 1 cut(s) 1223
RsaI GTAC 1 cut(s) 518
RsaNI GTAC 1 cut(s) 517
RseI CAYNNNNRTG 4 cut(s) 377, 1053, 1238, 1320
SaqAI TTAA 2 cut(s) 1608, 1782
SatI GCNGC 5 cut(s) 315, 1065, 1147, 1386, 1918
Sau3AI GATC 6 cut(s) 492, 926, 1165, 1624, 1645, 1785
Sau96I GGNCC 3 cut(s) 398, 463, 618
SchI GAGTC 3 cut(s) 255, 668, 1594
ScrFI CCNGG 3 cut(s) 266, 856, 1115
SduI GDGCHC 6 cut(s) 111, 192, 395, 801, 841, 1336
SexAI ACCWGGT 1 cut(s) 1113
SfaNI GCATC 7 cut(s) 735, 961, 1077, 1425, 1463, 1695, 1847
SfcI CTRYAG 2 cut(s) 1144, 1654
Sfr274I CTCGAG 1 cut(s) 1283
SfuI TTCGAA 1 cut(s) 1896
SinI GGWCC 1 cut(s) 618
SlaI CTCGAG 1 cut(s) 1283
SmiMI CAYNNNNRTG 4 cut(s) 377, 1053, 1238, 1320
SmlI CTYRAG 1 cut(s) 1283
SmoI CTYRAG 1 cut(s) 1283
Sse9I AATT 9 cut(s) 20, 36, 336, 739, 842, 865, 1380, 1669, 1912
SseBI AGGCCT 1 cut(s) 434
SsiI CCGC 6 cut(s) 226, 314, 359, 509, 1154, 1917
SspI AATATT 2 cut(s) 982, 1420
SspMI CTAG 2 cut(s) 128, 1289
StuI AGGCCT 1 cut(s) 434
StyD4I CCNGG 3 cut(s) 264, 854, 1113
TaaI ACNGT 3 cut(s) 349, 487, 1817
TaiI ACGT 5 cut(s) 135, 177, 210, 416, 522
TaqI TCGA 7 cut(s) 743, 801, 874, 1025, 1258, 1284, 1896
TaqII GACCGA 1 cut(s) 635
TasI AATT 9 cut(s) 20, 36, 336, 739, 842, 865, 1380, 1669, 1912
TauI GCSGC 2 cut(s) 317, 1920
TfiI GAWTC 4 cut(s) 82, 890, 1766, 1884
Tru1I TTAA 2 cut(s) 1608, 1782
Tru9I TTAA 2 cut(s) 1608, 1782
TscAI CASTG 3 cut(s) 400, 1050, 1102
TseFI GTSAC 3 cut(s) 1210, 1586, 1817
TseI GCWGC 3 cut(s) 1064, 1146, 1385
Tsp45I GTSAC 3 cut(s) 1210, 1586, 1817
TspDTI ATGAA 5 cut(s) 603, 1010, 1070, 1710, 1816
TspGWI ACGGA 1 cut(s) 1569
TspRI CASTG 3 cut(s) 400, 1050, 1102
Van91I CCANNNNNTGG 1 cut(s) 1223
VneI GTGCAC 1 cut(s) 837
VpaK11BI GGWCC 1 cut(s) 618
XapI RAATTY 3 cut(s) 20, 739, 1669
XbaI TCTAGA 1 cut(s) 127
XceI RCATGY 1 cut(s) 479
XcmI CCANNNNNNNNNTGG 1 cut(s) 1898
XhoI CTCGAG 1 cut(s) 1283
XmiI GTMKAC 1 cut(s) 1245
XmnI GAANNNNTTC 1 cut(s) 349
XspI CTAG 2 cut(s) 128, 1289
Zsp2I ATGCAT 2 cut(s) 976, 1456
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.