Rorug05G0052800

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
4599727 .. 4600005
279 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0052800.1

Sequence Viewer

Length: 279 bp
ATGGCTGTAGGACGAAGTGGACAGCTCAAAGACTTATGGTTGATTTGTTTCACTTCAATATTGTGGTTTGTATGGAATGCTAGAAACAAAATGAGACATGAGGGGAAGGTGTTTTCAGTTGGTACTATTTGTAGGCTTGTCTCTTGTCATATTCAAGCAGCTAGTCGTTTGGCAGCAGGTACCATGCACAATTCCATCCAAGATCTACGCAATTCAAGTAAGGGGCATGCCTCTTATTTGCTTCAGCTAAAAAAAAAAAAAAAGGGTGGCATTTGGTAA

Protein Analysis

92

Amino Acids

10.39

Weight (kDa)

10.57

Isoelectric Point (pI)

59.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0032378)

Species Orthologous Gene IDs
rosa_rugosa Rorug05G0052800
rosa_samantha Rh5BG142400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 167
Acc65I GGTACC 1 cut(s) 179
AccB1I GGYRCC 1 cut(s) 179
AcuI CTGAAG 1 cut(s) 227
AfaI GTAC 2 cut(s) 124, 181
AgsI TTSAA 3 cut(s) 57, 155, 216
AluBI AGCT 3 cut(s) 25, 161, 247
AluI AGCT 3 cut(s) 25, 161, 247
Alw26I GTCTC 2 cut(s) 88, 145
ApeKI GCWGC 2 cut(s) 158, 173
Asp718I GGTACC 1 cut(s) 179
BanI GGYRCC 1 cut(s) 179
BbvI GCAGC 2 cut(s) 170, 185
BccI CCATC 1 cut(s) 203
BcoDI GTCTC 2 cut(s) 88, 145
BfaI CTAG 2 cut(s) 81, 162
BfmI CTRYAG 1 cut(s) 6
BfuAI ACCTGC 1 cut(s) 167
BglII AGATCT 1 cut(s) 202
BisI GCNGC 2 cut(s) 159, 174
BlsI GCNGC 2 cut(s) 160, 175
BmiI GGNNCC 1 cut(s) 181
BseGI GGATG 1 cut(s) 195
BseXI GCAGC 2 cut(s) 170, 185
BshNI GGYRCC 1 cut(s) 179
BsmAI GTCTC 2 cut(s) 88, 145
BsmI GAATGC 1 cut(s) 82
Bsp143I GATC 1 cut(s) 202
BspLI GGNNCC 1 cut(s) 181
BspMI ACCTGC 1 cut(s) 167
BspT107I GGYRCC 1 cut(s) 179
BssMI GATC 1 cut(s) 202
BstC8I GCNNGC 1 cut(s) 228
BstF5I GGATG 1 cut(s) 195
BstKTI GATC 1 cut(s) 205
BstMAI GTCTC 2 cut(s) 88, 145
BstMBI GATC 1 cut(s) 202
BstNSI RCATGY 1 cut(s) 230
BstSFI CTRYAG 1 cut(s) 6
BstV1I GCAGC 2 cut(s) 170, 185
BstX2I RGATCY 1 cut(s) 202
BstYI RGATCY 1 cut(s) 202
BtsCI GGATG 1 cut(s) 195
BveI ACCTGC 1 cut(s) 167
Cac8I GCNNGC 1 cut(s) 228
Csp6I GTAC 2 cut(s) 123, 180
CviAII CATG 3 cut(s) 98, 184, 227
CviJI RGCY 5 cut(s) 5, 25, 136, 161, 247
CviKI_1 RGCY 5 cut(s) 5, 25, 136, 161, 247
CviQI GTAC 2 cut(s) 123, 180
DpnI GATC 1 cut(s) 204
DpnII GATC 1 cut(s) 202
Eco57I CTGAAG 1 cut(s) 227
FaeI CATG 3 cut(s) 101, 187, 230
FaiI YATR 6 cut(s) 37, 73, 99, 150, 185, 228
FatI CATG 3 cut(s) 97, 183, 226
Fnu4HI GCNGC 2 cut(s) 159, 174
FokI GGATG 1 cut(s) 182
Fsp4HI GCNGC 2 cut(s) 159, 174
FspBI CTAG 2 cut(s) 81, 162
GluI GCNGC 2 cut(s) 159, 174
Hin1II CATG 3 cut(s) 101, 187, 230
Hpy166II GTNNAC 1 cut(s) 20
Hpy8I GTNNAC 1 cut(s) 20
HpyAV CCTTC 1 cut(s) 100
HpyCH4V TGCA 1 cut(s) 187
Hsp92II CATG 3 cut(s) 101, 187, 230
KpnI GGTACC 1 cut(s) 183
Kzo9I GATC 1 cut(s) 202
LpnPI CCDG 1 cut(s) 162
Lsp1109I GCAGC 2 cut(s) 170, 185
MaeI CTAG 2 cut(s) 81, 162
MalI GATC 1 cut(s) 204
MboI GATC 1 cut(s) 202
MflI RGATCY 1 cut(s) 202
MluCI AATT 2 cut(s) 190, 211
MnlI CCTC 2 cut(s) 94, 241
Mva1269I GAATGC 1 cut(s) 82
NdeII GATC 1 cut(s) 202
NlaIII CATG 3 cut(s) 101, 187, 230
NlaIV GGNNCC 1 cut(s) 181
NspI RCATGY 1 cut(s) 230
PaeI GCATGC 1 cut(s) 230
PctI GAATGC 1 cut(s) 82
PkrI GCNGC 2 cut(s) 160, 175
PspN4I GGNNCC 1 cut(s) 181
PsuI RGATCY 1 cut(s) 202
RsaI GTAC 2 cut(s) 124, 181
RsaNI GTAC 2 cut(s) 123, 180
SatI GCNGC 2 cut(s) 159, 174
Sau3AI GATC 1 cut(s) 202
SetI ASST 5 cut(s) 27, 111, 163, 181, 249
SfcI CTRYAG 1 cut(s) 6
SphI GCATGC 1 cut(s) 230
Sse9I AATT 2 cut(s) 190, 211
SspI AATATT 1 cut(s) 60
SspMI CTAG 2 cut(s) 81, 162
TasI AATT 2 cut(s) 190, 211
TseI GCWGC 2 cut(s) 158, 173
XceI RCATGY 1 cut(s) 230
XspI CTAG 2 cut(s) 81, 162
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.