Rorug05G0156200

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
14567334 .. 14567651
318 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0156200.1

Sequence Viewer

Length: 318 bp
ATGCCTACTAGGACTCCTATGCGTGATGTGTCCAACAAATTGGATGGTGGAAATGGTTCTAAAAGTACTATGCAGTATCAAAGAAAAACAAAAAATTTGAGTTCTTCCCTATCCAATCTGCAGCTCCCTGTCCCCAAGCAGCTCTCTCTAGATAACACAAACACTAATGTGGGTAGCTCTGATGTGTCAGCCATTTTTGGACATACTCCTCCAGAGGAGACAATGAGCTGTGGTGATGACTCAACTTCTGCTGCAAAGTGTAAGGCTACTATTAGTTTTGTTGAGCAGGTTTTTATTTCAAATAGTGTTCTGACATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

105

Amino Acids

11.23

Weight (kDa)

7.78

Isoelectric Point (pI)

38.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0032386)

Species Orthologous Gene IDs
rosa_rugosa Rorug05G0156200
rosa_samantha Rh5CG281800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 277
AcsI RAATTY 1 cut(s) 94
AfaI GTAC 1 cut(s) 67
AgsI TTSAA 1 cut(s) 300
AleI CACNNNNGTG 1 cut(s) 167
AluBI AGCT 4 cut(s) 124, 142, 177, 228
AluI AGCT 4 cut(s) 124, 142, 177, 228
Alw26I GTCTC 1 cut(s) 212
ApeKI GCWGC 3 cut(s) 121, 139, 251
ApoI RAATTY 1 cut(s) 94
Asp700I GAANNNNTTC 1 cut(s) 55
AsuHPI GGTGA 1 cut(s) 245
BbvI GCAGC 3 cut(s) 133, 151, 238
BccI CCATC 1 cut(s) 38
BcoDI GTCTC 1 cut(s) 212
BfaI CTAG 2 cut(s) 9, 149
BfmI CTRYAG 1 cut(s) 119
BfuAI ACCTGC 1 cut(s) 277
BisI GCNGC 3 cut(s) 122, 140, 252
BlsI GCNGC 3 cut(s) 123, 141, 253
BmcAI AGTACT 1 cut(s) 67
BpmI CTGGAG 1 cut(s) 195
BsaXI ACNNNNNCTCC 1 cut(s) 28
BseGI GGATG 1 cut(s) 49
BseRI GAGGAG 2 cut(s) 198, 230
BseXI GCAGC 3 cut(s) 133, 151, 238
BslFI GGGAC 1 cut(s) 116
BsmAI GTCTC 1 cut(s) 212
BsmFI GGGAC 1 cut(s) 116
BspMAI CTGCAG 1 cut(s) 123
BspMI ACCTGC 1 cut(s) 277
BstF5I GGATG 1 cut(s) 49
BstMAI GTCTC 1 cut(s) 212
BstSFI CTRYAG 1 cut(s) 119
BstV1I GCAGC 3 cut(s) 133, 151, 238
BstXI CCANNNNNNTGG 1 cut(s) 40
BtsCI GGATG 1 cut(s) 49
BveI ACCTGC 1 cut(s) 277
Csp6I GTAC 1 cut(s) 66
CviJI RGCY 6 cut(s) 124, 142, 177, 191, 228, 266
CviKI_1 RGCY 6 cut(s) 124, 142, 177, 191, 228, 266
CviQI GTAC 1 cut(s) 66
FaiI YATR 4 cut(s) 20, 71, 204, 316
FaqI GGGAC 1 cut(s) 116
Fnu4HI GCNGC 3 cut(s) 122, 140, 252
FokI GGATG 1 cut(s) 56
Fsp4HI GCNGC 3 cut(s) 122, 140, 252
FspBI CTAG 2 cut(s) 9, 149
GluI GCNGC 3 cut(s) 122, 140, 252
GsuI CTGGAG 1 cut(s) 195
HinfI GANTC 2 cut(s) 13, 239
HphI GGTGA 1 cut(s) 245
Hpy188I TCNGA 2 cut(s) 181, 312
Hpy188III TCNNGA 2 cut(s) 149, 212
HpyCH4V TGCA 3 cut(s) 73, 121, 254
LmnI GCTCC 1 cut(s) 129
LpnPI CCDG 3 cut(s) 141, 225, 272
Lsp1109I GCAGC 3 cut(s) 133, 151, 238
MaeI CTAG 2 cut(s) 9, 149
MboII GAAGA 1 cut(s) 96
MluCI AATT 2 cut(s) 38, 94
MlyI GAGTC 2 cut(s) 7, 233
MmeI TCCRAC 1 cut(s) 57
MnlI CCTC 2 cut(s) 208, 219
MroXI GAANNNNTTC 1 cut(s) 55
MslI CAYNNNNRTG 1 cut(s) 167
OliI CACNNNNGTG 1 cut(s) 167
PdmI GAANNNNTTC 1 cut(s) 55
PkrI GCNGC 3 cut(s) 123, 141, 253
PleI GAGTC 2 cut(s) 7, 233
PpsI GAGTC 2 cut(s) 7, 233
PstI CTGCAG 1 cut(s) 123
RsaI GTAC 1 cut(s) 67
RsaNI GTAC 1 cut(s) 66
RseI CAYNNNNRTG 1 cut(s) 167
SatI GCNGC 3 cut(s) 122, 140, 252
ScaI AGTACT 1 cut(s) 67
SchI GAGTC 2 cut(s) 7, 233
SetI ASST 5 cut(s) 126, 144, 179, 230, 291
SfcI CTRYAG 1 cut(s) 119
SgeI CNNG 7 cut(s) 21, 35, 140, 148, 161, 224, 299
SmiMI CAYNNNNRTG 1 cut(s) 167
Sse9I AATT 2 cut(s) 38, 94
SspMI CTAG 2 cut(s) 9, 149
TasI AATT 2 cut(s) 38, 94
TatI WGTACW 1 cut(s) 65
TseI GCWGC 3 cut(s) 121, 139, 251
XapI RAATTY 1 cut(s) 94
XbaI TCTAGA 1 cut(s) 148
XmnI GAANNNNTTC 1 cut(s) 55
XspI CTAG 2 cut(s) 9, 149
ZrmI AGTACT 1 cut(s) 67
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.