Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0025122

Physical Location & Seq

Genomic Coordinates Forward (+)

20106246 .. 20114329

Gene Structure 8084 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0202400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3108 bp

ATGGATTCTCATTCAAAGCTTGAAGAAAGAGTTAGAGATAGGATAAGTGAGTTGCCAGATCTTGTTCTTATTCACATAGTTTCATTTCTTGAAACGAAATATGCTGTGAGGACCAGCATTTTGTCCACAAGATGGAAGGGTATATGGGCCTTTAGTCCCAATCTGGACTTCCGCGATAGATTTACGAAGAACAAAGCTGGTTTTGTGGATTTTGTTGATAGGGTACTTATCTTCCGTGACGCGGATATTCAAAAGTTTCGTCTCGAATGTTCCAATATTGGGGATTTCTCTCGTATTTATAGCTGGATTCGTACTGCAGTTAGGCATAACGTTGTTGAAGTTGATCTTAATTTTGGATCCAACAGAGACCAGGTTTATGAGTTGCCAGACAGCCTTTTTATGTGTAAATCACTGGAGGTGTTGAAGGTGGTATCGGGATGTATTACTTTTGATCCTCCATCACAGAGGTTTCCCAGTCTCAAGGTCCTCAATGCTTGTCTTTATCATCCTAACAATGACTCAATGGAGAGGCTTTTCTCTTGCTGCCCTGCACTAGAATATTTGTCTATAAGGGCAACTATTGGAGATGAGGTTTTGAATTTCAAAGTGTCTGCACCTGAACTGAATACATTTAAGGTAGATTTGTTCAATGCGTATAAAGATGAAAATGAATATCACAGCGAAGATGAAGATGAAGCTCCTGAATGCATTGATGTCTACAACTTCTTCATTAATGCCCCAAAGCTTGAAACCATTGATATCCATACCGATATCTTGTCAAATTTTTTCTTTGAAAATGCAGCATCACTAATGAAAGCCAATATTAATCTCACTGACCATGATTCAAGTGAACGGCGTACCTTTGCTAATTGTGCAACTGCACTTCTGGCAGCAGTTTCCAATGTTAAGGATTTGTCTCTTTCAGCTCATTGTTTCAAGGCTTGTTATCTCCCCGCTTTTGATAACTTAAGCAAATTGAAGCTGGTTTTTCAAGATTGCCATCACCTGGAATTGCTGTTACCAGAGTTTCTCATCAGATCACCTAAACTGGAATCTCTCATCATAGATCATTTTGAGTATGCTTGTGGAGAACATACCAACAACAGTCGTTGGAGTCAACCAAAGAAGGTGCCAAATTGTTTGCTGTCACAGCTCAAGACTATCAGCCTGAGGGGATTAAGAGGAGCTCCTGATGAAATGAAAATGGCAAAGTATTTGTTAATGACTGGTAAAGTTCTGGAAACAGTGACTGTTTCAACTACAACTGACAGGGATCTTCTTTCTGTGTATGCAACAGAGAAGGAATTACAGAAGACATTCTGTACCTTTCAAAAGGGTTCAAAGACTTGTGTAGTTAAATTCGTCAAAGACAAAGTTAGTAGGTTACATATGGATTCGAAGTCTAAGAGTCAAGCAAAAGCTAAAGACAGGATCAGTGAATTGCCTGAAGCAGTTCTTTGTCACATACTTTCGTTCCTTCCCACAAAATACAGTTTCAGGACCAGCATTTTATCCACAAGATGGAAGAACGTGTGGGCCTCTGTTCCCATCCTAGACATCTGCGATGAAGCCACGTCTGACAAAACTGGGTTTATGGCATTTGTTGATCGAATACTGTTCTCTCCTCAATCATCTAACATTCGAAAATTCCGTCTTCATTGTTCCTCTGTTGACGATTTCTCTCGTATTGATAGTTGGGTCTGCCGTGCCATCCAACGTAATGCTGTTGAAGTTGATCTTTGTGTTGAATCACATGGAGAGCATATTTTTGAGTTGCCTAAGCCGCTTTTAATCTCAAAAACACTAGAGGTTTTGAAGTTGGACTCAAATTATGTTATTAATCTTCCTCTATCAAGGAGTTTCCCCAGTCTCAGGTTCCTCCACATTACAGTTGATTCTCCAGATAGTTATGCAATGGGAACAATCATTTCCTACTGCCCTGTGCTTGAAAATCTGACTGTAGATGGAACTCTTGGAAATCATGTTCGTAGTATCACTGTCTCGGCGGCTCAACTAAAGAGTTTAAGAATTAGATTGAGGAGCACTACAGATGTTCTTCATGATGCACACAACTTCTCGATTAATGCCCCAAAGCTTGAATACCTTGATATCGAGGAGGATATTTTGTCCAATTATAAGTTAGAGAATGGAAAATCACTGGTGAAAGCCCATGCTCGTGTCATTGACTATTCTACAATTAGAGGTCATGACTTTCTTAACCGTGCAACTGCGCTTATGTCAACAATTTCCAATGTTAAGTATCTGTCTCTTTCAGCTATGTACTTGGAGGATCTTTGTCTGCCAACTTTTGGTAATTTGAGCCACTTGAAGCTGGTTGCTAACTATTGCAATTACTGGGAAGTGCCAGACTTGCTCGAGAGAATTCCTAAATTGGAATATCTCGTCTTAGAATATAAAGTGATATTTATAGGTGGAGATTCAGAGTATCAAAGGATACCAACGGAGTCTGTGCCTATTTGTTTGACGTCACACCTCAAAAGTATCTCCATAAGGGGATTGAAGGGTGAGTCCAATGAACTGGAAATGTTGAAATACTTGTTAAAGAATGGTGAAGTTTTGGAGAAGATGACTATTTATGCTGGTGGTCTTCTGCATACAAAAGAGGAGTTAAACAAGGAAGTTTCAGAGTATTTCCCAAGTCTCAAAGTCCTCTGTGTTGAATTTTTTGAACATGATGATGATTCATTCCCAAAGCTTTTTACTTGTTGCCCTGTACTTGAAGTTCTCACTATTTGCTGTCTGACTCCTGGCCATCAAACGTTTTTGAATATCAATATCTCTGCTCCTGAATTGAAGACATTGAGAATAAAATTGGAGTTTAATCCTTATTTTAATGTTCCTGCATACAATTTTTTCATTAATGCCCCAAAGCTGGAGAAGTTGGATGTCAATGATGACTTGTTTGTGTCAAATTATCTCTTTGAGAATGGAAAATCTATATTCAATGCTAAAATTAGACTTCATACTGTAAGAGAAAGTGATGAATCTCCTCTTGGTGGTGTTGTTGAATCTCTGTCACTTGCTGTCAAAGGTCTGGATGTAAGTCCTGCTAACCTTGTGCATATTTCACACTTTTTTGACCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004190 GO:0005575 GO:0005623 GO:0005886 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0009056 GO:0009057 GO:0016020 GO:0016787 GO:0019538 GO:0030163 GO:0031224 GO:0031225 GO:0031226 GO:0043170 GO:0044238 GO:0044425 GO:0044459 GO:0044464 GO:0046658 GO:0070001 GO:0070011 GO:0071704 GO:0071944 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Alba TAXi_C TAXi_N

Protein Analysis

1035

Amino Acids

117.91

Weight (kDa)

6.05

Isoelectric Point (pI)

39.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
F-box	PF00646	15 - 49	5.6e-06	F-box domain
LRR_At1g61320_AtMIF1	PF23622	83 - 205	2.6e-07	At1g61320/AtMIF1, LRR domain
LRR_At5g56370	PF24758	101 - 194	5.9e-13	FBD-associated F-box protein At5g56370, LRR repeats
LRR_At1g61320_AtMIF1	PF23622	244 - 447	5.6e-06	At1g61320/AtMIF1, LRR domain
FBD	PF08387	373 - 417	3.2e-12	FBD
F-box	PF00646	478 - 517	1.1e-08	F-box domain
LRR_At1g61320_AtMIF1	PF23622	546 - 865	1.8e-08	At1g61320/AtMIF1, LRR domain
LRR_At5g56370	PF24758	564 - 712	1.9e-08	FBD-associated F-box protein At5g56370, LRR repeats
FBD	PF08387	822 - 865	5.6e-14	FBD

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0025122)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr7g0189081
rosa_rugosa	Rorug05G0202400
rosa_samantha	Rh5CG324400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2136
AatII	GACGTC	1 cut(s)	2489
AccB1I	GGYRCC	1 cut(s)	1129
AccB7I	CCANNNNNTGG	4 cut(s)	132, 1006, 1521, 2309
AccI	GTMKAC	1 cut(s)	717
AccII	CGCG	2 cut(s)	174, 242
AciI	CCGC	5 cut(s)	172, 242, 954, 1784, 2006
AclI	AACGTT	2 cut(s)	330, 2780
AclWI	GGATC	6 cut(s)	351, 364, 446, 1281, 1439, 2298
AcoI	YGGCCR	1 cut(s)	2770
AcsI	RAATTY	6 cut(s)	598, 781, 1358, 1646, 2382, 2681
AcuI	CTGAAG	1 cut(s)	1467
AcyI	GRCGYC	1 cut(s)	2486
AfaI	GTAC	6 cut(s)	225, 313, 859, 1324, 2282, 2736
AfiI	CCNNNNNNNGG	9 cut(s)	132, 241, 279, 1006, 1521, 1872, 2309, 2893, 3017
AflII	CTTAAG	1 cut(s)	967
AflIII	ACRYGT	1 cut(s)	1530
AjiI	CACGTC	1 cut(s)	1575
AjnI	CCWGG	3 cut(s)	369, 1005, 2767
AjuI	GAANNNNNNNTTGG	4 cut(s)	152, 184, 2997, 3029
AloI	GAACNNNNNNTCC	2 cut(s)	1968, 2000
Alw21I	GWGCWC	2 cut(s)	1189, 2045
Alw26I	GTCTC	8 cut(s)	266, 360, 482, 921, 1874, 2005, 2271, 2666
AlwI	GGATC	6 cut(s)	351, 364, 446, 1281, 1439, 2298
AlwNI	CAGNNNCTG	1 cut(s)	1250
Ama87I	CYCGRG	1 cut(s)	2375
AoxI	GGCC	3 cut(s)	147, 1536, 2770
ApeKI	GCWGC	3 cut(s)	543, 800, 890
ApoI	RAATTY	6 cut(s)	598, 781, 1358, 1646, 2382, 2681
ArsI	GACNNNNNNTTYG	6 cut(s)	103, 135, 244, 276, 1636, 1668
AseI	ATTAAT	5 cut(s)	732, 825, 1839, 2082, 2880
Asp700I	GAANNNNTTC	2 cut(s)	1316, 1452
AspLEI	GCGC	1 cut(s)	2233
AspS9I	GGNCC	5 cut(s)	111, 147, 484, 1500, 1536
AsuHPI	GGTGA	5 cut(s)	995, 1032, 2173, 2537, 2582
AsuII	TTCGAA	2 cut(s)	1397, 1642
AvaI	CYCGRG	1 cut(s)	2375
AvaII	GGWCC	3 cut(s)	111, 484, 1500
AxyI	CCTNAGG	1 cut(s)	1169
BalI	TGGCCA	1 cut(s)	2772
BamHI	GGATCC	1 cut(s)	356
BanI	GGYRCC	1 cut(s)	1129
BanII	GRGCYC	1 cut(s)	1189
BauI	CACGAG	1 cut(s)	2175
BbsI	GAAGAC	4 cut(s)	1319, 1646, 2600, 2822
Bbv12I	GWGCWC	2 cut(s)	1189, 2045
BbvI	GCAGC	3 cut(s)	530, 812, 902
BccI	CCATC	8 cut(s)	126, 466, 1008, 1515, 1556, 1718, 1958, 2781
BceAI	ACGGC	2 cut(s)	869, 1689
BciT130I	CCWGG	3 cut(s)	371, 1007, 2769
BciVI	GTATCC	1 cut(s)	2448
BcoDI	GTCTC	8 cut(s)	266, 360, 482, 921, 1874, 2005, 2271, 2666
BfaI	CTAG	3 cut(s)	554, 1553, 1805
BfmI	CTRYAG	3 cut(s)	315, 1959, 2046
BfrI	CTTAAG	1 cut(s)	967
BfuI	GTATCC	1 cut(s)	2448
BglII	AGATCT	1 cut(s)	58
BisI	GCNGC	5 cut(s)	544, 801, 891, 1784, 2007
BlsI	GCNGC	5 cut(s)	545, 802, 892, 1785, 2008
Bme1390I	CCNGG	3 cut(s)	371, 1007, 2769
Bme18I	GGWCC	3 cut(s)	111, 484, 1500
BmeT110I	CYCGRG	1 cut(s)	2375
BmgBI	CACGTC	1 cut(s)	1575
BmgT120I	GGNCC	5 cut(s)	111, 147, 484, 1500, 1536
BmiI	GGNNCC	3 cut(s)	358, 1131, 1877
BmrFI	CCNGG	3 cut(s)	371, 1007, 2769
BmrI	ACTGGG	4 cut(s)	468, 1596, 1860, 2365
BmsI	GCATC	2 cut(s)	812, 2053
BmuI	ACTGGG	4 cut(s)	468, 1596, 1860, 2365
BpiI	GAAGAC	4 cut(s)	1319, 1646, 2600, 2822
BpmI	CTGGAG	3 cut(s)	434, 1884, 2915
Bpu10I	CCTNAGC	1 cut(s)	1779
Bpu14I	TTCGAA	2 cut(s)	1397, 1642
BpuEI	CTTGAG	2 cut(s)	464, 1139
BsaBI	GATNNNNATC	1 cut(s)	999
BsaHI	GRCGYC	1 cut(s)	2486
BsaI	GGTCTC	1 cut(s)	360
BsaXI	ACNNNNNCTCC	2 cut(s)	576, 606
Bsc4I	CCNNNNNNNGG	9 cut(s)	132, 241, 279, 1006, 1521, 1872, 2309, 2893, 3017
Bse1I	ACTGG	9 cut(s)	417, 474, 1053, 1231, 1591, 1866, 2163, 2360, 2544
Bse21I	CCTNAGG	1 cut(s)	1169
Bse3DI	GCAATG	1 cut(s)	1920
Bse8I	GATNNNNATC	1 cut(s)	999
BseBI	CCWGG	3 cut(s)	371, 1007, 2769
BseGI	GGATG	6 cut(s)	443, 505, 1548, 1710, 2911, 3064
BseJI	GATNNNNATC	1 cut(s)	999
BseLI	CCNNNNNNNGG	9 cut(s)	132, 241, 279, 1006, 1521, 1872, 2309, 2893, 3017
BseMI	GCAATG	1 cut(s)	1920
BseMII	CTCAG	2 cut(s)	1160, 1885
BseNI	ACTGG	9 cut(s)	417, 474, 1053, 1231, 1591, 1866, 2163, 2360, 2544
BseRI	GAGGAG	6 cut(s)	1197, 1614, 2053, 2129, 2639, 3000
BseXI	GCAGC	3 cut(s)	530, 812, 902
BsgI	GTGCAG	3 cut(s)	534, 597, 864
Bsh1236I	CGCG	2 cut(s)	174, 242
BshFI	GGCC	3 cut(s)	149, 1538, 2772
BshNI	GGYRCC	1 cut(s)	1129
BsiHKAI	GWGCWC	2 cut(s)	1189, 2045
BsiHKCI	CYCGRG	1 cut(s)	2375
BslFI	GGGAC	1 cut(s)	141
BslI	CCNNNNNNNGG	9 cut(s)	132, 241, 279, 1006, 1521, 1872, 2309, 2893, 3017
BsmAI	GTCTC	8 cut(s)	266, 360, 482, 921, 1874, 2005, 2271, 2666
BsmBI	CGTCTC	1 cut(s)	266
BsmFI	GGGAC	1 cut(s)	141
BsmI	GAATGC	1 cut(s)	710
BsnI	GGCC	3 cut(s)	149, 1538, 2772
Bso31I	GGTCTC	1 cut(s)	360
BsoBI	CYCGRG	1 cut(s)	2375
Bsp119I	TTCGAA	2 cut(s)	1397, 1642
Bsp1286I	GDGCHC	2 cut(s)	1189, 2045
BspACI	CCGC	5 cut(s)	172, 242, 954, 1784, 2006
BspANI	GGCC	3 cut(s)	149, 1538, 2772
BspCNI	CTCAG	2 cut(s)	1161, 1884
BspFNI	CGCG	2 cut(s)	174, 242
BspHI	TCATGA	2 cut(s)	2059, 2206
BspLI	GGNNCC	3 cut(s)	358, 1131, 1877
BspMAI	CTGCAG	1 cut(s)	319
BspPI	GGATC	6 cut(s)	351, 364, 446, 1281, 1439, 2298
BspT104I	TTCGAA	2 cut(s)	1397, 1642
BspT107I	GGYRCC	1 cut(s)	1129
BspTI	CTTAAG	1 cut(s)	967
BspTNI	GGTCTC	1 cut(s)	360
BsrDI	GCAATG	1 cut(s)	1920
BsrI	ACTGG	9 cut(s)	417, 474, 1053, 1231, 1591, 1866, 2163, 2360, 2544
BssNI	GRCGYC	1 cut(s)	2486
BssSI	CACGAG	1 cut(s)	2175
Bst2BI	CACGAG	1 cut(s)	2175
Bst2UI	CCWGG	3 cut(s)	371, 1007, 2769
BstACI	GRCGYC	1 cut(s)	2486
BstAFI	CTTAAG	1 cut(s)	967
BstBI	TTCGAA	2 cut(s)	1397, 1642
BstDEI	CTNAG	5 cut(s)	1169, 1404, 1779, 1871, 2407
BstF5I	GGATG	6 cut(s)	443, 505, 1548, 1710, 2911, 3064
BstFNI	CGCG	2 cut(s)	174, 242
BstHHI	GCGC	1 cut(s)	2233
BstMAI	GTCTC	8 cut(s)	266, 360, 482, 921, 1874, 2005, 2271, 2666
BstMWI	GCNNNNNNNGC	5 cut(s)	872, 887, 1150, 1783, 2371
BstNI	CCWGG	3 cut(s)	371, 1007, 2769
BstSCI	CCNGG	3 cut(s)	369, 1005, 2767
BstSFI	CTRYAG	3 cut(s)	315, 1959, 2046
BstUI	CGCG	2 cut(s)	174, 242
BstV1I	GCAGC	3 cut(s)	530, 812, 902
BstV2I	GAAGAC	4 cut(s)	1319, 1646, 2600, 2822
BstX2I	RGATCY	4 cut(s)	58, 356, 1273, 2290
BstXI	CCANNNNNNTGG	1 cut(s)	2539
BstYI	RGATCY	4 cut(s)	58, 356, 1273, 2290
Bsu36I	CCTNAGG	1 cut(s)	1169
BsuI	GTATCC	1 cut(s)	2448
BsuRI	GGCC	3 cut(s)	149, 1538, 2772
BtgZI	GCGATG	1 cut(s)	1578
BtrI	CACGTC	1 cut(s)	1575
BtsCI	GGATG	6 cut(s)	443, 505, 1548, 1710, 2911, 3064
BtsIMutI	CAGTG	6 cut(s)	410, 831, 1251, 1441, 1995, 2156
CaiI	CAGNNNCTG	1 cut(s)	1250
CciI	TCATGA	2 cut(s)	2059, 2206
CfoI	GCGC	1 cut(s)	2233
Cfr13I	GGNCC	5 cut(s)	111, 147, 484, 1500, 1536
CseI	GACGC	1 cut(s)	248
CsiI	ACCWGGT	1 cut(s)	369
Csp6I	GTAC	6 cut(s)	224, 312, 858, 1323, 2281, 2735
CviAII	CATG	7 cut(s)	839, 1754, 1982, 2060, 2171, 2207, 2693
CviQI	GTAC	6 cut(s)	224, 312, 858, 1323, 2281, 2735
DdeI	CTNAG	5 cut(s)	1169, 1404, 1779, 1871, 2407
EaeI	YGGCCR	1 cut(s)	2770
Ecl136II	GAGCTC	1 cut(s)	1187
Eco24I	GRGCYC	1 cut(s)	1189
Eco31I	GGTCTC	1 cut(s)	360
Eco32I	GATATC	3 cut(s)	760, 772, 2110
Eco47I	GGWCC	3 cut(s)	111, 484, 1500
Eco53kI	GAGCTC	1 cut(s)	1187
Eco57I	CTGAAG	1 cut(s)	1467
Eco81I	CCTNAGG	1 cut(s)	1169
Eco88I	CYCGRG	1 cut(s)	2375
EcoICRI	GAGCTC	1 cut(s)	1187
EcoO109I	RGGNCCY	1 cut(s)	484
EcoRI	GAATTC	1 cut(s)	2382
EcoRII	CCWGG	3 cut(s)	369, 1005, 2767
EcoRV	GATATC	3 cut(s)	760, 772, 2110
EcoT22I	ATGCAT	1 cut(s)	710
EcoT38I	GRGCYC	1 cut(s)	1189
Esp3I	CGTCTC	1 cut(s)	266
FaeI	CATG	7 cut(s)	842, 1757, 1985, 2063, 2174, 2210, 2696
FalI	AAGNNNNNCTT	6 cut(s)	330, 362, 1440, 1472, 1722, 1754
FaqI	GGGAC	1 cut(s)	141
FatI	CATG	7 cut(s)	838, 1753, 1981, 2059, 2170, 2206, 2692
FauI	CCCGC	1 cut(s)	961
FauNDI	CATATG	1 cut(s)	1389
FblI	GTMKAC	1 cut(s)	717
Fnu4HI	GCNGC	5 cut(s)	544, 801, 891, 1784, 2007
FokI	GGATG	6 cut(s)	450, 492, 1535, 1697, 2918, 3071
FriOI	GRGCYC	1 cut(s)	1189
Fsp4HI	GCNGC	5 cut(s)	544, 801, 891, 1784, 2007
FspBI	CTAG	3 cut(s)	554, 1553, 1805
GlaI	GCGC	1 cut(s)	2232
GluI	GCNGC	5 cut(s)	544, 801, 891, 1784, 2007
GsuI	CTGGAG	3 cut(s)	434, 1884, 2915
HaeIII	GGCC	3 cut(s)	149, 1538, 2772
HgaI	GACGC	1 cut(s)	248
HhaI	GCGC	1 cut(s)	2233
Hin1I	GRCGYC	1 cut(s)	2486
Hin1II	CATG	7 cut(s)	842, 1757, 1985, 2063, 2174, 2210, 2696
Hin6I	GCGC	1 cut(s)	2231
HinP1I	GCGC	1 cut(s)	2231
HincII	GTYRAC	3 cut(s)	1118, 1672, 2241
HindII	GTYRAC	3 cut(s)	1118, 1672, 2241
HindIII	AAGCTT	4 cut(s)	17, 743, 2093, 2714
HphI	GGTGA	5 cut(s)	995, 1032, 2173, 2537, 2582
Hpy166II	GTNNAC	6 cut(s)	126, 718, 851, 1118, 1672, 2241
Hpy188I	TCNGA	6 cut(s)	1037, 1579, 1956, 2443, 2647, 2763
Hpy8I	GTNNAC	6 cut(s)	126, 718, 851, 1118, 1672, 2241
HpyAV	CCTTC	6 cut(s)	130, 418, 1120, 1294, 1487, 2515
HpyCH4IV	ACGT	6 cut(s)	330, 1530, 1574, 1717, 2486, 2780
HpyF10VI	GCNNNNNNNGC	5 cut(s)	872, 887, 1150, 1783, 2371
HpyF3I	CTNAG	5 cut(s)	1169, 1404, 1779, 1871, 2407
HpySE526I	ACGT	6 cut(s)	330, 1530, 1574, 1717, 2486, 2780
Hsp92I	GRCGYC	1 cut(s)	2486
Hsp92II	CATG	7 cut(s)	842, 1757, 1985, 2063, 2174, 2210, 2696
HspAI	GCGC	1 cut(s)	2231
LmnI	GCTCC	5 cut(s)	703, 1184, 1192, 2040, 2809
Lsp1109I	GCAGC	3 cut(s)	530, 812, 902
LweI	GCATC	2 cut(s)	812, 2053
MabI	ACCWGGT	1 cut(s)	369
MaeI	CTAG	3 cut(s)	554, 1553, 1805
MaeII	ACGT	6 cut(s)	330, 1530, 1574, 1717, 2486, 2780
MaeIII	GTNAC	8 cut(s)	236, 1017, 1146, 1246, 1383, 1460, 2487, 3036
MflI	RGATCY	4 cut(s)	58, 356, 1273, 2290
MhlI	GDGCHC	2 cut(s)	1189, 2045
MlsI	TGGCCA	1 cut(s)	2772
MluNI	TGGCCA	1 cut(s)	2772
MlyI	GAGTC	7 cut(s)	512, 1123, 1417, 1817, 2474, 2537, 2758
MmeI	TCCRAC	5 cut(s)	384, 1091, 1738, 1800, 2883
Mox20I	TGGCCA	1 cut(s)	2772
Mph1103I	ATGCAT	1 cut(s)	710
MroXI	GAANNNNTTC	2 cut(s)	1316, 1452
MscI	TGGCCA	1 cut(s)	2772
MslI	CAYNNNNRTG	2 cut(s)	2175, 2697
Msp20I	TGGCCA	1 cut(s)	2772
MspCI	CTTAAG	1 cut(s)	967
MspR9I	CCNGG	3 cut(s)	371, 1007, 2769
Mva1269I	GAATGC	1 cut(s)	710
MvaI	CCWGG	3 cut(s)	371, 1007, 2769
MvnI	CGCG	2 cut(s)	174, 242
MwoI	GCNNNNNNNGC	5 cut(s)	872, 887, 1150, 1783, 2371
NdeI	CATATG	1 cut(s)	1389
NlaIII	CATG	7 cut(s)	842, 1757, 1985, 2063, 2174, 2210, 2696
NlaIV	GGNNCC	3 cut(s)	358, 1131, 1877
NmeAIII	GCCGAG	1 cut(s)	1982
NmuCI	GTSAC	6 cut(s)	236, 1146, 1246, 1460, 2487, 3036
NsiI	ATGCAT	1 cut(s)	710
NspV	TTCGAA	2 cut(s)	1397, 1642
PaeR7I	CTCGAG	1 cut(s)	2375
PagI	TCATGA	2 cut(s)	2059, 2206
PcsI	WCGNNNNNNNCGW	1 cut(s)	1648
PctI	GAATGC	1 cut(s)	710
PdmI	GAANNNNTTC	2 cut(s)	1316, 1452
PflMI	CCANNNNNTGG	4 cut(s)	132, 1006, 1521, 2309
PkrI	GCNGC	5 cut(s)	545, 802, 892, 1785, 2008
PleI	GAGTC	7 cut(s)	512, 1122, 1416, 1817, 2473, 2536, 2758
PpsI	GAGTC	7 cut(s)	512, 1122, 1416, 1817, 2473, 2536, 2758
PpuMI	RGGWCCY	1 cut(s)	484
PshBI	ATTAAT	5 cut(s)	732, 825, 1839, 2082, 2880
PsiI	TTATAA	1 cut(s)	2136
Psp124BI	GAGCTC	1 cut(s)	1189
Psp1406I	AACGTT	2 cut(s)	330, 2780
Psp5II	RGGWCCY	1 cut(s)	484
Psp6I	CCWGG	3 cut(s)	369, 1005, 2767
PspGI	CCWGG	3 cut(s)	369, 1005, 2767
PspN4I	GGNNCC	3 cut(s)	358, 1131, 1877
PspPI	GGNCC	5 cut(s)	111, 147, 484, 1500, 1536
PspPPI	RGGWCCY	1 cut(s)	484
PsrI	GAACNNNNNNTAC	2 cut(s)	2727, 2759
PstI	CTGCAG	1 cut(s)	319
PstNI	CAGNNNCTG	1 cut(s)	1250
PsuI	RGATCY	4 cut(s)	58, 356, 1273, 2290
RsaI	GTAC	6 cut(s)	225, 313, 859, 1324, 2282, 2736
RsaNI	GTAC	6 cut(s)	224, 312, 858, 1323, 2281, 2735
RseI	CAYNNNNRTG	2 cut(s)	2175, 2697
SacI	GAGCTC	1 cut(s)	1189
SatI	GCNGC	5 cut(s)	544, 801, 891, 1784, 2007
Sau96I	GGNCC	5 cut(s)	111, 147, 484, 1500, 1536
SchI	GAGTC	7 cut(s)	512, 1123, 1417, 1817, 2474, 2537, 2758
ScrFI	CCNGG	3 cut(s)	371, 1007, 2769
SduI	GDGCHC	2 cut(s)	1189, 2045
SexAI	ACCWGGT	1 cut(s)	369
SfaNI	GCATC	2 cut(s)	812, 2053
SfcI	CTRYAG	3 cut(s)	315, 1959, 2046
Sfr274I	CTCGAG	1 cut(s)	2375
SfuI	TTCGAA	2 cut(s)	1397, 1642
SinI	GGWCC	3 cut(s)	111, 484, 1500
SlaI	CTCGAG	1 cut(s)	2375
SmiMI	CAYNNNNRTG	2 cut(s)	2175, 2697
SmlI	CTYRAG	4 cut(s)	479, 967, 1154, 2375
SmoI	CTYRAG	4 cut(s)	479, 967, 1154, 2375
SsiI	CCGC	5 cut(s)	172, 242, 954, 1784, 2006
SspI	AATATT	3 cut(s)	277, 560, 823
SspMI	CTAG	3 cut(s)	554, 1553, 1805
SstI	GAGCTC	1 cut(s)	1189
StyD4I	CCNGG	3 cut(s)	369, 1005, 2767
TaiI	ACGT	6 cut(s)	333, 1533, 1577, 1720, 2489, 2783
TaqI	TCGA	7 cut(s)	264, 1397, 1609, 1642, 2078, 2112, 2376
TatI	WGTACW	2 cut(s)	2280, 2734
TauI	GCSGC	2 cut(s)	1786, 2009
TscAI	CASTG	6 cut(s)	417, 838, 1251, 1441, 2002, 2163
TseFI	GTSAC	6 cut(s)	236, 1146, 1246, 1460, 2487, 3036
TseI	GCWGC	3 cut(s)	543, 800, 890
Tsp45I	GTSAC	6 cut(s)	236, 1146, 1246, 1460, 2487, 3036
TspGWI	ACGGA	3 cut(s)	224, 1640, 2477
TspRI	CASTG	6 cut(s)	417, 838, 1251, 1441, 2002, 2163
Van91I	CCANNNNNTGG	4 cut(s)	132, 1006, 1521, 2309
Vha464I	CTTAAG	1 cut(s)	967
VpaK11BI	GGWCC	3 cut(s)	111, 484, 1500
VspI	ATTAAT	5 cut(s)	732, 825, 1839, 2082, 2880
XapI	RAATTY	6 cut(s)	598, 781, 1358, 1646, 2382, 2681
XhoI	CTCGAG	1 cut(s)	2375
XmiI	GTMKAC	1 cut(s)	717
XmnI	GAANNNNTTC	2 cut(s)	1316, 1452
XspI	CTAG	3 cut(s)	554, 1553, 1805
ZraI	GACGTC	1 cut(s)	2487
Zsp2I	ATGCAT	1 cut(s)	710

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.