Rorug05G0557200

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0025085
Physical Location & Seq
Reverse (-)
74643585 .. 74651696
8112 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0557200.1

Sequence Viewer

Length: 2223 bp
ATGGGAGAGGAAAGATATTTACCACTGTTTGAGACAACGAGAGCAAAGGGAAGAGTCCTATACAGGTTATTTGCAGTGTCTGTTTTTGTTGGTATATGTTTGATATGGGTATATAGAGTGACTCACATACCGAAAGCTGGAGAAGATGGAAGATTTGGTTGGATGTGTTTGTTCGCTGCTGAGTTATGGTTCAGCTTTTACTGGGTCGTCACTCAAGCCACTCGGTGGAGCCGCATCTACAGACACACCTTCAAGGACAGGCTTTCTCAAAGATATGAGAAAGAATTGCCGGGGGTGGACATATTTGTGTGCACCGCGGATCCAATCATAGAGCCACCGATGATGGTGATGAACACTGTTTTGTCGGTCGTGGCTTACGACTACCCACCGGAGAAGCTCAGCGTGTATCTCTCCGATGATGGTGGCTCAGAACTAACATACTATGCTCTACTAGAAGCTGCTGAGTTTGCTAAGCACTGGATACCACATTGCAAGAAATACAGTGTGGAACCAAGGTCGCCGGCTGCTTATTTCGTTTCAACAGCTTCTGATGCGGTTGGTGATCAAAGTCAGAATCAGAATCGAGCTGGTGATGTGGCTCTCATTAAGAAATTATACAAGAACATGGAGAATAAAATTGAAAATGCAGTGAAGCTAGGCCGCATTTCAGAAGAAGTACGATCAAAACATAAAGGTTTTTCTCAGTGGAACTCATATTCATCAAAGCTAGACCATGATACCATTCTTCAAATAGTAGTTGATGGGAGAAACCCAAATGCAAGAGATGTTGAAGGGTGTATGTTGCCAACTTTGGTGTATTTGGCTCGGGAGAAGAGACCCCAGTACCACCATAACTTCAAAGCTGGCGCTATGAATGCACTGATTAGGGTATCATCGAGCATTAGCAATGGGAAGTTACTTCTTAATGTAGATTGTGATATGTATTCGAACAACTCCATGGCCATAAGGGATGCACTTTGCTTCTTTATGGATGAAGAACAAGGCCATGAGATCGCATACGTACAGTTCCCACAGAATTTCGACAACCTTACTAAGAATGAATTATACGCTTCATTAAAAGTAATTAACGAGGTGGAAGCCCATGGTCTGGATAATTATTGGGGGACCTTATATATTGGAAGTGGATGCTTTCACAGAAGAGAAGTTCTTTGTGGCAATATATTCAGCAAGGGTTGTAGGAGTGAAATGAAATGGGAGGGTAAAAAAGGAGAAGAAATTGCCATTCATGACTTGGAAGAAACTTCAAAGAGTCTTGCAAGTTGTGCATTTGAAGAGAACACTCAATGGGGAAAAGAGATGGGTTTGAAATATGGGTGTCCGGTTGAAGATGTGATAACGGGGTTATCGATCCAATGCCGAGGATGGAAATCAGTGTATTGCAATCCAACAAGGAAAGCTTTCTTAGGATTAAATGCAACCACATTGCTTCAGATACTTGTGCAGCATAAGAGATGGTCCGAAGGTAACCTCCAGATTATGCTTTCAAAGTACAGTGCTGTATGGTTTGGGCATGGAAAGATTAGTTTAGGCCATCAACTTGGATACCTTCGCTACAACTTATGGGCTGCTAACTGCTGGGCAACACTAATTTACTCGATTCTCCCTTCACTTTACCTCCTTAGAGGCACATCCTTATTTCCTCAGATTTCAAGCCGATGGATCATACCATTTGCATATGTTATAATTGCTAAGAACATTGGGAGCTTTCTGGAGTATATGTGGTGTGGAGGCACAACGTTAGGTTGGTGGAACGACCAACGTATATGGCTTTACCAGAGAATAACCTCATACCTATTTGCCTTCATCGACACCATTGTACACTACCTTGGATACACAGATTCAGCATTTGTAATAACAGCCAAGGTGACCGATGAAGATGTGTCCGAACGGTACAAGAAAGAGATCATGGAATTTGGCGGATCGTCTCCAATGTTTACCGTACTGGCAACACTAGCATTGCTCAACTTGTACTGCTTTGCCGGGTTTGTGCAGGCAGCAATCGCTGGAACAATTGGCGTTGCAGAATTTTATGAGACAATGTGCTTGCAGATTCTTCTATGTGGGTTTTTGATTGTCATTAACCTACCATTGTACGAAGCCCTATACCTAAGGAAGGACAAGGGGAAGCTGCCAAGCTCTGTAGCAGTTAAGTCAATGGCATTTGCTGGATTTGCTTGTATATGTTCTAAATTTATATACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

740

Amino Acids

84.28

Weight (kDa)

7.92

Isoelectric Point (pI)

38.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cellulose_synt PF03552 99 - 392 1.3e-89 Cellulose synthase
Cellulose_synt PF03552 423 - 729 3.6e-41 Cellulose synthase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0025085)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr6g0255321
rosa_multiflora Rmu_sc0011027.1_g000007
rosa_rugosa Rorug05G0557200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1703
AccB7I CCANNNNNTGG 2 cut(s) 225, 1108
AccII CGCG 1 cut(s) 317
AciI CCGC 6 cut(s) 232, 315, 317, 554, 661, 1938
AclI AACGTT 1 cut(s) 1757
AclWI GGATC 5 cut(s) 314, 327, 1363, 1688, 1948
AcoI YGGCCR 1 cut(s) 960
AcsI RAATTY 4 cut(s) 1036, 1931, 2045, 2210
AcuI CTGAAG 1 cut(s) 1433
AdeI CACNNNGTG 1 cut(s) 225
AfaI GTAC 9 cut(s) 678, 845, 1023, 1511, 1839, 1913, 1962, 1991, 2114
AfiI CCNNNNNNNGG 4 cut(s) 137, 225, 1108, 2134
AjuI GAANNNNNNNTTGG 2 cut(s) 142, 174
Alw21I GWGCWC 1 cut(s) 314
Alw26I GTCTC 4 cut(s) 26, 829, 1950, 2048
Alw44I GTGCAC 1 cut(s) 310
AlwI GGATC 5 cut(s) 314, 327, 1363, 1688, 1948
AlwNI CAGNNNCTG 2 cut(s) 80, 548
Ama87I CYCGRG 1 cut(s) 825
AoxI GGCC 4 cut(s) 658, 960, 1003, 1549
ApaLI GTGCAC 1 cut(s) 310
ApeKI GCWGC 7 cut(s) 176, 458, 524, 1462, 1586, 2015, 2149
ApoI RAATTY 4 cut(s) 1036, 1931, 2045, 2210
Asp700I GAANNNNTTC 1 cut(s) 1418
AspLEI GCGC 1 cut(s) 869
AspS9I GGNCC 2 cut(s) 1125, 1476
AsuC2I CCSGG 2 cut(s) 291, 2002
AsuHPI GGTGA 4 cut(s) 358, 572, 602, 1897
AsuII TTCGAA 1 cut(s) 947
AvaI CYCGRG 1 cut(s) 825
AvaII GGWCC 2 cut(s) 1125, 1476
AxyI CCTNAGG 1 cut(s) 2129
BaeGI GKGCMC 1 cut(s) 314
BaeI ACNNNNGTAYC 2 cut(s) 827, 860
BalI TGGCCA 1 cut(s) 962
BamHI GGATCC 1 cut(s) 319
Bbv12I GWGCWC 1 cut(s) 314
BbvI GCAGC 7 cut(s) 163, 445, 511, 1474, 1573, 2027, 2136
BccI CCATC 9 cut(s) 140, 337, 413, 755, 1312, 1377, 1467, 1560, 1671
BciVI GTATCC 3 cut(s) 474, 1556, 1844
BclI TGATCA 1 cut(s) 562
BcnI CCSGG 2 cut(s) 291, 2002
BcoDI GTCTC 4 cut(s) 26, 829, 1950, 2048
BfaI CTAG 4 cut(s) 452, 656, 728, 1973
BfmI CTRYAG 2 cut(s) 238, 2160
BfoI RGCGCY 1 cut(s) 870
BfuI GTATCC 3 cut(s) 474, 1556, 1844
BisI GCNGC 9 cut(s) 177, 232, 459, 525, 661, 1463, 1587, 2016, 2150
BlpI GCTNAGC 2 cut(s) 398, 471
BlsI GCNGC 9 cut(s) 178, 233, 460, 526, 662, 1464, 1588, 2017, 2151
Bme1390I CCNGG 2 cut(s) 291, 2002
Bme18I GGWCC 2 cut(s) 1125, 1476
BmeT110I CYCGRG 1 cut(s) 825
BmgT120I GGNCC 2 cut(s) 1125, 1476
BmiI GGNNCC 4 cut(s) 230, 321, 510, 1126
BmrFI CCNGG 2 cut(s) 291, 2002
BmrI ACTGGG 2 cut(s) 211, 835
BmsI GCATC 4 cut(s) 243, 541, 961, 1136
BmuI ACTGGG 2 cut(s) 211, 835
BpmI CTGGAG 3 cut(s) 159, 1475, 1751
Bpu1102I GCTNAGC 2 cut(s) 398, 471
Bpu14I TTCGAA 1 cut(s) 947
BpuEI CTTGAG 1 cut(s) 198
BpuMI CCSGG 2 cut(s) 291, 2002
Bsa29I ATCGAT 1 cut(s) 1367
BsaAI YACGTR 1 cut(s) 1021
BsaBI GATNNNNATC 1 cut(s) 1387
BsaI GGTCTC 1 cut(s) 829
BsaJI CCNNGG 8 cut(s) 290, 315, 512, 957, 1102, 1378, 1846, 1881
BsaWI WCCGGW 2 cut(s) 388, 1339
BsaXI ACNNNNNCTCC 4 cut(s) 1620, 1650, 1724, 1754
Bsc4I CCNNNNNNNGG 4 cut(s) 137, 225, 1108, 2134
Bse118I RCCGGY 1 cut(s) 520
Bse1I ACTGG 4 cut(s) 206, 482, 841, 1968
Bse21I CCTNAGG 1 cut(s) 2129
Bse3DI GCAATG 4 cut(s) 487, 913, 1442, 1976
Bse8I GATNNNNATC 1 cut(s) 1387
BseCI ATCGAT 1 cut(s) 1367
BseDI CCNNGG 8 cut(s) 290, 315, 512, 957, 1102, 1378, 1846, 1881
BseGI GGATG 6 cut(s) 168, 976, 997, 1151, 1388, 1649
BseJI GATNNNNATC 1 cut(s) 1387
BseLI CCNNNNNNNGG 4 cut(s) 137, 225, 1108, 2134
BseMI GCAATG 4 cut(s) 487, 913, 1442, 1976
BseMII CTCAG 6 cut(s) 171, 412, 441, 453, 716, 1676
BseNI ACTGG 4 cut(s) 206, 482, 841, 1968
BseSI GKGCMC 1 cut(s) 314
BseXI GCAGC 7 cut(s) 163, 445, 511, 1474, 1573, 2027, 2136
BseYI CCCAGC 1 cut(s) 1596
BsgI GTGCAG 2 cut(s) 1481, 2030
Bsh1236I CGCG 1 cut(s) 317
Bsh1285I CGRYCG 1 cut(s) 369
BshFI GGCC 4 cut(s) 660, 962, 1005, 1551
BshVI ATCGAT 1 cut(s) 1367
BsiEI CGRYCG 1 cut(s) 369
BsiHKAI GWGCWC 1 cut(s) 314
BsiHKCI CYCGRG 1 cut(s) 825
BsiSI CCGG 5 cut(s) 290, 389, 521, 1340, 2001
BslFI GGGAC 1 cut(s) 1138
BslI CCNNNNNNNGG 4 cut(s) 137, 225, 1108, 2134
BsmAI GTCTC 4 cut(s) 26, 829, 1950, 2048
BsmBI CGTCTC 1 cut(s) 1950
BsmFI GGGAC 1 cut(s) 1138
BsmI GAATGC 1 cut(s) 880
BsnI GGCC 4 cut(s) 660, 962, 1005, 1551
Bso31I GGTCTC 1 cut(s) 829
BsoBI CYCGRG 1 cut(s) 825
Bsp119I TTCGAA 1 cut(s) 947
Bsp1286I GDGCHC 1 cut(s) 314
Bsp1407I TGTACA 1 cut(s) 1837
Bsp143I GATC 8 cut(s) 319, 562, 680, 1011, 1368, 1680, 1923, 1940
Bsp1720I GCTNAGC 2 cut(s) 398, 471
Bsp19I CCATGG 2 cut(s) 957, 1102
BspACI CCGC 6 cut(s) 232, 315, 317, 554, 661, 1938
BspANI GGCC 4 cut(s) 660, 962, 1005, 1551
BspCNI CTCAG 6 cut(s) 172, 411, 440, 454, 715, 1675
BspDI ATCGAT 1 cut(s) 1367
BspFNI CGCG 1 cut(s) 317
BspHI TCATGA 1 cut(s) 1246
BspLI GGNNCC 4 cut(s) 230, 321, 510, 1126
BspPI GGATC 5 cut(s) 314, 327, 1363, 1688, 1948
BspT104I TTCGAA 1 cut(s) 947
BspTNI GGTCTC 1 cut(s) 829
BsrDI GCAATG 4 cut(s) 487, 913, 1442, 1976
BsrFI RCCGGY 1 cut(s) 520
BsrGI TGTACA 1 cut(s) 1837
BsrI ACTGG 4 cut(s) 206, 482, 841, 1968
BssAI RCCGGY 1 cut(s) 520
BssECI CCNNGG 8 cut(s) 290, 315, 512, 957, 1102, 1378, 1846, 1881
BssMI GATC 8 cut(s) 319, 562, 680, 1011, 1368, 1680, 1923, 1940
BssT1I CCWWGG 5 cut(s) 512, 957, 1102, 1846, 1881
Bst4CI ACNGT 7 cut(s) 27, 358, 503, 1026, 1514, 1911, 1960
Bst6I CTCTTC 4 cut(s) 46, 827, 1153, 1287
BstAPI GCANNNNNTGC 1 cut(s) 1283
BstAUI TGTACA 1 cut(s) 1837
BstBAI YACGTR 1 cut(s) 1021
BstBI TTCGAA 1 cut(s) 947
BstC8I GCNNGC 4 cut(s) 522, 865, 2013, 2066
BstDSI CCRYGG 3 cut(s) 315, 957, 1102
BstEII GGTNACC 2 cut(s) 1484, 1885
BstENI CCTNNNNNAGG 1 cut(s) 2132
BstF5I GGATG 6 cut(s) 168, 976, 997, 1151, 1388, 1649
BstFNI CGCG 1 cut(s) 317
BstH2I RGCGCY 1 cut(s) 870
BstHHI GCGC 1 cut(s) 869
BstKTI GATC 8 cut(s) 322, 565, 683, 1014, 1371, 1683, 1926, 1943
BstMAI GTCTC 4 cut(s) 26, 829, 1950, 2048
BstMBI GATC 8 cut(s) 319, 562, 680, 1011, 1368, 1680, 1923, 1940
BstMCI CGRYCG 1 cut(s) 369
BstMWI GCNNNNNNNGC 7 cut(s) 467, 551, 875, 1283, 1973, 2021, 2192
BstPI GGTNACC 2 cut(s) 1484, 1885
BstSCI CCNGG 2 cut(s) 289, 2000
BstSFI CTRYAG 2 cut(s) 238, 2160
BstSLI GKGCMC 1 cut(s) 314
BstSNI TACGTA 1 cut(s) 1021
BstUI CGCG 1 cut(s) 317
BstV1I GCAGC 7 cut(s) 163, 445, 511, 1474, 1573, 2027, 2136
BstX2I RGATCY 1 cut(s) 319
BstXI CCANNNNNNTGG 1 cut(s) 1559
BstYI RGATCY 1 cut(s) 319
Bsu15I ATCGAT 1 cut(s) 1367
Bsu36I CCTNAGG 1 cut(s) 2129
BsuI GTATCC 3 cut(s) 474, 1556, 1844
BsuRI GGCC 4 cut(s) 660, 962, 1005, 1551
BsuTUI ATCGAT 1 cut(s) 1367
BtgI CCRYGG 3 cut(s) 315, 957, 1102
BtsCI GGATG 6 cut(s) 168, 976, 997, 1151, 1388, 1649
BtsI GCAGTG 2 cut(s) 81, 654
Cac8I GCNNGC 4 cut(s) 522, 865, 2013, 2066
CaiI CAGNNNCTG 2 cut(s) 80, 548
CciI TCATGA 1 cut(s) 1246
CfoI GCGC 1 cut(s) 869
Cfr10I RCCGGY 1 cut(s) 520
Cfr13I GGNCC 2 cut(s) 1125, 1476
Cfr42I CCGCGG 1 cut(s) 318
ClaI ATCGAT 1 cut(s) 1367
Csp6I GTAC 9 cut(s) 677, 844, 1022, 1510, 1838, 1912, 1961, 1990, 2113
CviAII CATG 8 cut(s) 625, 734, 958, 1007, 1103, 1247, 1532, 1927
CviQI GTAC 9 cut(s) 677, 844, 1022, 1510, 1838, 1912, 1961, 1990, 2113
DpnI GATC 8 cut(s) 321, 564, 682, 1013, 1370, 1682, 1925, 1942
DpnII GATC 8 cut(s) 319, 562, 680, 1011, 1368, 1680, 1923, 1940
DraIII CACNNNGTG 1 cut(s) 225
EaeI YGGCCR 1 cut(s) 960
Eam1104I CTCTTC 4 cut(s) 46, 827, 1153, 1287
EarI CTCTTC 4 cut(s) 46, 827, 1153, 1287
EciI GGCGGA 1 cut(s) 1953
Eco105I TACGTA 1 cut(s) 1021
Eco130I CCWWGG 5 cut(s) 512, 957, 1102, 1846, 1881
Eco31I GGTCTC 1 cut(s) 829
Eco47I GGWCC 2 cut(s) 1125, 1476
Eco57I CTGAAG 1 cut(s) 1433
Eco81I CCTNAGG 1 cut(s) 2129
Eco88I CYCGRG 1 cut(s) 825
Eco91I GGTNACC 2 cut(s) 1484, 1885
EcoNI CCTNNNNNAGG 1 cut(s) 2132
EcoO109I RGGNCCY 1 cut(s) 1125
EcoO65I GGTNACC 2 cut(s) 1484, 1885
EcoT14I CCWWGG 5 cut(s) 512, 957, 1102, 1846, 1881
ErhI CCWWGG 5 cut(s) 512, 957, 1102, 1846, 1881
Esp3I CGTCTC 1 cut(s) 1950
FaeI CATG 8 cut(s) 628, 737, 961, 1010, 1106, 1250, 1535, 1930
FalI AAGNNNNNCTT 2 cut(s) 1402, 1434
FaqI GGGAC 1 cut(s) 1138
FatI CATG 8 cut(s) 624, 733, 957, 1006, 1102, 1246, 1531, 1926
FauNDI CATATG 1 cut(s) 1696
FbaI TGATCA 1 cut(s) 562
Fnu4HI GCNGC 9 cut(s) 177, 232, 459, 525, 661, 1463, 1587, 2016, 2150
FokI GGATG 6 cut(s) 175, 983, 1004, 1158, 1395, 1636
Fsp4HI GCNGC 9 cut(s) 177, 232, 459, 525, 661, 1463, 1587, 2016, 2150
FspBI CTAG 4 cut(s) 452, 656, 728, 1973
GlaI GCGC 1 cut(s) 868
GluI GCNGC 9 cut(s) 177, 232, 459, 525, 661, 1463, 1587, 2016, 2150
GsaI CCCAGC 1 cut(s) 1600
GsuI CTGGAG 3 cut(s) 159, 1475, 1751
HaeII RGCGCY 1 cut(s) 870
HaeIII GGCC 4 cut(s) 660, 962, 1005, 1551
HapII CCGG 5 cut(s) 290, 389, 521, 1340, 2001
HhaI GCGC 1 cut(s) 869
Hin1II CATG 8 cut(s) 628, 737, 961, 1010, 1106, 1250, 1535, 1930
Hin6I GCGC 1 cut(s) 867
HinP1I GCGC 1 cut(s) 867
HindIII AAGCTT 1 cut(s) 1416
HinfI GANTC 8 cut(s) 54, 121, 574, 580, 1270, 1618, 1859, 2071
HpaII CCGG 5 cut(s) 290, 389, 521, 1340, 2001
HphI GGTGA 4 cut(s) 358, 572, 602, 1897
Hpy166II GTNNAC 4 cut(s) 298, 312, 1840, 1956
Hpy188III TCNNGA 5 cut(s) 827, 1109, 1247, 1492, 1730
Hpy8I GTNNAC 4 cut(s) 298, 312, 1840, 1956
HpyAV CCTTC 7 cut(s) 259, 785, 1475, 1577, 1635, 1831, 2128
HpyCH4III ACNGT 7 cut(s) 27, 358, 503, 1026, 1514, 1911, 1960
HpyCH4IV ACGT 3 cut(s) 1020, 1757, 1780
HpyF10VI GCNNNNNNNGC 7 cut(s) 467, 551, 875, 1283, 1973, 2021, 2192
HpySE526I ACGT 3 cut(s) 1020, 1757, 1780
Hsp92II CATG 8 cut(s) 628, 737, 961, 1010, 1106, 1250, 1535, 1930
HspAI GCGC 1 cut(s) 867
KroI GCCGGC 1 cut(s) 520
KroNI GCCGGC 1 cut(s) 522
Ksp22I TGATCA 1 cut(s) 562
KspI CCGCGG 1 cut(s) 318
Kzo9I GATC 8 cut(s) 319, 562, 680, 1011, 1368, 1680, 1923, 1940
LmnI GCTCC 2 cut(s) 228, 1722
Lsp1109I GCAGC 7 cut(s) 163, 445, 511, 1474, 1573, 2027, 2136
LweI GCATC 4 cut(s) 243, 541, 961, 1136
MaeI CTAG 4 cut(s) 452, 656, 728, 1973
MaeII ACGT 3 cut(s) 1020, 1757, 1780
MaeIII GTNAC 5 cut(s) 118, 208, 915, 1484, 1885
MalI GATC 8 cut(s) 321, 564, 682, 1013, 1370, 1682, 1925, 1942
MboI GATC 8 cut(s) 319, 562, 680, 1011, 1368, 1680, 1923, 1940
MfeI CAATTG 1 cut(s) 2031
MflI RGATCY 1 cut(s) 319
MhlI GDGCHC 1 cut(s) 314
MlsI TGGCCA 1 cut(s) 962
MluNI TGGCCA 1 cut(s) 962
MlyI GAGTC 3 cut(s) 63, 115, 1279
MmeI TCCRAC 2 cut(s) 140, 1430
MnlI CCTC 9 cut(s) 1084, 1210, 1373, 1499, 1637, 1646, 1671, 1742, 1816
Mox20I TGGCCA 1 cut(s) 962
MroNI GCCGGC 1 cut(s) 520
MroXI GAANNNNTTC 1 cut(s) 1418
MscI TGGCCA 1 cut(s) 962
MseI TTAA 7 cut(s) 606, 924, 1076, 1086, 1430, 2100, 2169
MslI CAYNNNNRTG 1 cut(s) 305
Msp20I TGGCCA 1 cut(s) 962
MspA1I CMGCKG 1 cut(s) 317
MspI CCGG 5 cut(s) 290, 389, 521, 1340, 2001
MspR9I CCNGG 2 cut(s) 291, 2002
MunI CAATTG 1 cut(s) 2031
Mva1269I GAATGC 1 cut(s) 880
MvnI CGCG 1 cut(s) 317
MwoI GCNNNNNNNGC 7 cut(s) 467, 551, 875, 1283, 1973, 2021, 2192
NaeI GCCGGC 1 cut(s) 522
NciI CCSGG 2 cut(s) 291, 2002
NcoI CCATGG 2 cut(s) 957, 1102
NdeI CATATG 1 cut(s) 1696
NdeII GATC 8 cut(s) 319, 562, 680, 1011, 1368, 1680, 1923, 1940
NgoMIV GCCGGC 1 cut(s) 520
NlaIII CATG 8 cut(s) 628, 737, 961, 1010, 1106, 1250, 1535, 1930
NlaIV GGNNCC 4 cut(s) 230, 321, 510, 1126
NmeAIII GCCGAG 1 cut(s) 1403
NmuCI GTSAC 3 cut(s) 118, 208, 1885
NspV TTCGAA 1 cut(s) 947
PagI TCATGA 1 cut(s) 1246
PcsI WCGNNNNNNNCGW 2 cut(s) 375, 1364
PctI GAATGC 1 cut(s) 880
PdiI GCCGGC 1 cut(s) 522
PdmI GAANNNNTTC 1 cut(s) 1418
PfeI GAWTC 5 cut(s) 574, 580, 1618, 1859, 2071
PflMI CCANNNNNTGG 2 cut(s) 225, 1108
PkrI GCNGC 9 cut(s) 178, 233, 460, 526, 662, 1464, 1588, 2017, 2151
PleI GAGTC 3 cut(s) 62, 115, 1278
PpsI GAGTC 3 cut(s) 62, 115, 1278
Ppu21I YACGTR 1 cut(s) 1021
PpuMI RGGWCCY 1 cut(s) 1125
PsiI TTATAA 1 cut(s) 1703
Psp1406I AACGTT 1 cut(s) 1757
Psp5II RGGWCCY 1 cut(s) 1125
PspEI GGTNACC 2 cut(s) 1484, 1885
PspFI CCCAGC 1 cut(s) 1596
PspN4I GGNNCC 4 cut(s) 230, 321, 510, 1126
PspPI GGNCC 2 cut(s) 1125, 1476
PspPPI RGGWCCY 1 cut(s) 1125
PstNI CAGNNNCTG 2 cut(s) 80, 548
PsuI RGATCY 1 cut(s) 319
RsaI GTAC 9 cut(s) 678, 845, 1023, 1511, 1839, 1913, 1962, 1991, 2114
RsaNI GTAC 9 cut(s) 677, 844, 1022, 1510, 1838, 1912, 1961, 1990, 2113
RseI CAYNNNNRTG 1 cut(s) 305
SacII CCGCGG 1 cut(s) 318
SaqAI TTAA 7 cut(s) 606, 924, 1076, 1086, 1430, 2100, 2169
SatI GCNGC 9 cut(s) 177, 232, 459, 525, 661, 1463, 1587, 2016, 2150
Sau3AI GATC 8 cut(s) 319, 562, 680, 1011, 1368, 1680, 1923, 1940
Sau96I GGNCC 2 cut(s) 1125, 1476
SchI GAGTC 3 cut(s) 63, 115, 1279
ScrFI CCNGG 2 cut(s) 291, 2002
SduI GDGCHC 1 cut(s) 314
SfaNI GCATC 4 cut(s) 243, 541, 961, 1136
SfcI CTRYAG 2 cut(s) 238, 2160
Sfr303I CCGCGG 1 cut(s) 318
SfuI TTCGAA 1 cut(s) 947
SgrBI CCGCGG 1 cut(s) 318
SinI GGWCC 2 cut(s) 1125, 1476
SmiMI CAYNNNNRTG 1 cut(s) 305
SmlI CTYRAG 1 cut(s) 213
SmoI CTYRAG 1 cut(s) 213
SnaBI TACGTA 1 cut(s) 1021
SsiI CCGC 6 cut(s) 232, 315, 317, 554, 661, 1938
SspMI CTAG 4 cut(s) 452, 656, 728, 1973
StyD4I CCNGG 2 cut(s) 289, 2000
StyI CCWWGG 5 cut(s) 512, 957, 1102, 1846, 1881
TaaI ACNGT 7 cut(s) 27, 358, 503, 1026, 1514, 1911, 1960
TaiI ACGT 3 cut(s) 1023, 1760, 1783
TaqI TCGA 7 cut(s) 583, 896, 947, 1041, 1367, 1616, 1827
TaqII GACCGA 2 cut(s) 355, 1904
TatI WGTACW 3 cut(s) 1509, 1837, 1989
TauI GCSGC 2 cut(s) 234, 663
TfiI GAWTC 5 cut(s) 574, 580, 1618, 1859, 2071
Tru1I TTAA 7 cut(s) 606, 924, 1076, 1086, 1430, 2100, 2169
Tru9I TTAA 7 cut(s) 606, 924, 1076, 1086, 1430, 2100, 2169
TseFI GTSAC 3 cut(s) 118, 208, 1885
TseI GCWGC 7 cut(s) 176, 458, 524, 1462, 1586, 2015, 2149
Tsp45I GTSAC 3 cut(s) 118, 208, 1885
Van91I CCANNNNNTGG 2 cut(s) 225, 1108
VneI GTGCAC 1 cut(s) 310
VpaK11BI GGWCC 2 cut(s) 1125, 1476
XagI CCTNNNNNAGG 1 cut(s) 2132
XapI RAATTY 4 cut(s) 1036, 1931, 2045, 2210
XcmI CCANNNNNNNNNTGG 1 cut(s) 1249
XmnI GAANNNNTTC 1 cut(s) 1418
XspI CTAG 4 cut(s) 452, 656, 728, 1973
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.