Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0023097

Physical Location & Seq

Genomic Coordinates Reverse (-)

6095880 .. 6098129

Gene Structure 2250 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0046500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2250 bp

ATGGCCAGCATCAAAACAGTCAGCTACTCTTTTTTAGTGAATGGAGAAGTCAGAGGCTATGTAAAACCATCTCGAGGTATAAGACAAGGGGACCCTATATCCCCATACCTATTCATATTATGCGCAGAAGGCTTATCAGCCTTAATTGAGCACTTTGCACAACAACAATGGATCCAGGGTATTGTTCTTGCACCAACTGCACCACGCCTGCACCACCTACTCTTTGCTGATGACAGTTTCTTGTTTGGCACGGCCAACACAGAAGAATGCCAACAGTTCCGAAATATCCTGCACACATATGAAATTGCTTCGGGGCAAAAGATCAACCTCCAGAAAAGTGAAGTAGCATTCAGCAAGAATATTGATAGTACTGTGCAGCATCAATTAGCCAATTTGTTGGGGGTCCAAAGGGTTGACAAGCATGAAAGATATCTTGGATTGCCAACCTATGTGGGACGCACAAAAACAGCGGCTTTTAGCTACCTCAAAGAAAAACTAACTAACAAGGTCGTTAGTTGGCGAGCAAAATTACTGAGTGGAGCTGGCAAGGAGATATTAATCAAAGCGGTGGCACAAACAGTACCAAACTATGTAATGAACTGCTATAAACTGCCAATAGGTTTATGTGAAGACCTACAACAACTGTGTGCAGGTTTTTGGTGGGGAGACTCAGAGGACAAGCAACATATACATTGGAGATCTTGGGATAGATTGTGTGTACCAAAAAAAGAAGGTGGAATGGGATTCAAAAATTTACACTGGTTTAATCTAGGAATGTTGGCAAAACAAGGTTGGCGCATTGTGAGAAATCCGAACTCCCTGGTAGCAAGACTCTACAAAGCTATCTACCATCCAAACAGTGATTTCCTACATGCAGAACTAGGGGATCAACCTTCGTTCCCCTGGAGAAGCATCTGGGAAGGCAGAGCAGTACTCAAACAAGGTTTACGATGGCAGGTGGGCAATGGGCAAAATATTGATATATGGCGGGACTCTTGGCTACCAGACTCCTACCCTCGCAGTCCGACTACTCCGCAACCCAGAGACGCACCGAAAAAGGTATGTGAACTAATCTGTCCACATACAAAGAATTGGAATATACAGAAACTAGAGCAGTGGTTTGCTCCAGTGGATATAGAGCTGATCCTAAAAATACCTCTAAGCAAACGAGCTCCCCGAGACAGGCTAGTTTGGCATTTCAATACCAAGGGCCTATTCACTACAAAAAGCGCTTACTATGTGGCAAGGGACCAAGCGTTGGGGCTGGTTTTAGCTCCCCCACGAATTCCGGATGCATATGACAAGCTATGGCAAGCTATATGGACTGCAAAGGTCCCAAACAAAGTTGCTTTGCAGGTCTGGAGGACATGCGTCAATATTCTACCAAATAGAAGCTGCTTGAGTACAAAAGGATATACAGGAGAATTAACATGCCCATTGTGTGAAAATGGAATGGAAGAAAACATCCACGTATTCACAACTTGCGATTATGCTAAAGAAATCTGGGCAGCAGCGACAATAGCTCGGCCACAGGGTGACTTCGCAGATATAAAAGAATGGCTCCTACGTTCGGTATCCGTGACAAGCAAGGAAGGGTTTGCAAAAATAATGATGCTGATATGGGGAATCTGGAAAAATCGAAACACCCAGGTGTGGGAAGGAAAAAAACAACATCCTCGTGATGTTGTATTGATGACTATGAGCTGGCTAGAGGACTTCCTGAAAGCAAATAACAATGAACATCCTCATAGGGACAGAACCAAACGTTGGGAGAAGCCCCCTGAGACCTGGTTGAAATGCAATGTAGATGGTGCCTTTATAGCACAGGTGGGACTAAGTGGAGCTGGCATGGTATTCAGAGACGATAGAGGCCAGTTTCGAGCAGCAGCTATGAGACCTTTATCAGCAATTACCACACCTTTCCATGCCGAACTGCAGGCCATGCATGAAGCCGCTCAAATGGCAGCTGGAATGAACTACCAAAAAGTCATTTTTGAGACTGACTGTTCTACGCTGGCAGCTGCACTAAATCAAGAAGAACGAGATTGCTCTTTGCATGGTTTCCTGATAGACGATGTCAAAGATTTCATGCACCAACATGGGGAGTATATAATCATCTACGCTCCACGTGAGACCAACAAGATAGCCCACAACTTAGCTAGTAAAGCTTGTAATAGTAATAGCCAAAACTGGTTTGGCACTGCTCCCGTATTTATAAGGGATGCCATTCTAAACGAGTGTTCTCGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003002 GO:0003006 GO:0003674 GO:0003824 GO:0005215 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009965 GO:0010016 GO:0010051 GO:0010154 GO:0010222 GO:0010588 GO:0015399 GO:0015405 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022414 GO:0022804 GO:0022857 GO:0031224 GO:0032501 GO:0032502 GO:0042623 GO:0042626 GO:0042802 GO:0042803 GO:0043492 GO:0044425 GO:0044464 GO:0046983 GO:0048316 GO:0048366 GO:0048367 GO:0048598 GO:0048608 GO:0048731 GO:0048825 GO:0048826 GO:0048827 GO:0048856 GO:0051179 GO:0051234 GO:0055085 GO:0061458 GO:0071944 GO:0090698 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

ko01523 ko02010 ko04976 map01523 map02010 map04976

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

749

Amino Acids

85.49

Weight (kDa)

9.03

Isoelectric Point (pI)

38.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RVT_1	PF00078	13 - 134	5.3e-10	Reverse transcriptase (RNA-dependent DNA polymerase)
zf-RVT	PF13966	406 - 502	4e-13	zinc-binding in reverse transcriptase
RVT_3	PF13456	601 - 723	1.3e-22	Reverse transcriptase-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0023097)

Species	Orthologous Gene IDs
rosa_multiflora	Rmu_sc0003228.1_g000004
rosa_rugosa	Rorug06G0046400 Rorug06G0046400 Rorug06G0046500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2216
AarI	CACCTGC	1 cut(s)	946
Acc16I	TGCGCA	1 cut(s)	124
Acc36I	ACCTGC	3 cut(s)	641, 946, 1345
AccB1I	GGYRCC	1 cut(s)	1811
AccB7I	CCANNNNNTGG	2 cut(s)	1258, 1767
AccBSI	CCGCTC	1 cut(s)	1955
AccIII	TCCGGA	1 cut(s)	1288
AciI	CCGC	5 cut(s)	470, 566, 988, 1034, 1953
AclI	AACGTT	1 cut(s)	1765
AclWI	GGATC	4 cut(s)	166, 179, 894, 1138
AcoI	YGGCCR	3 cut(s)	3, 252, 1526
AcsI	RAATTY	2 cut(s)	751, 1284
AcvI	CACGTG	1 cut(s)	2129
AdeI	CACNNNGTG	1 cut(s)	1535
AfaI	GTAC	5 cut(s)	370, 582, 720, 933, 1405
AfeI	AGCGCT	1 cut(s)	1231
AfiI	CCNNNNNNNGG	8 cut(s)	74, 1182, 1258, 1570, 1653, 1654, 1767, 2101
AgsI	TTSAA	3 cut(s)	748, 1201, 1795
AjnI	CCWGG	5 cut(s)	174, 819, 902, 1647, 1787
AjuI	GAANNNNNNNTTGG	6 cut(s)	417, 449, 1199, 1231, 1750, 1782
AleI	CACNNNNGTG	1 cut(s)	1649
Alw21I	GWGCWC	2 cut(s)	153, 1174
Alw26I	GTCTC	8 cut(s)	660, 1038, 1173, 1778, 1854, 1888, 1991, 2126
AlwI	GGATC	4 cut(s)	166, 179, 894, 1138
Ama87I	CYCGRG	2 cut(s)	72, 1176
Aor13HI	TCCGGA	1 cut(s)	1288
Aor51HI	AGCGCT	1 cut(s)	1231
AoxI	GGCC	6 cut(s)	3, 252, 1210, 1526, 1870, 1938
ApeKI	GCWGC	9 cut(s)	376, 1395, 1508, 1511, 1883, 1886, 1964, 2018, 2021
ApoI	RAATTY	2 cut(s)	751, 1284
AseI	ATTAAT	1 cut(s)	557
AspLEI	GCGC	3 cut(s)	125, 798, 1232
AspS9I	GGNCC	5 cut(s)	91, 403, 1210, 1249, 1333
AsuHPI	GGTGA	1 cut(s)	1547
AvaI	CYCGRG	2 cut(s)	72, 1176
AvaII	GGWCC	4 cut(s)	91, 403, 1249, 1333
BalI	TGGCCA	1 cut(s)	5
BamHI	GGATCC	1 cut(s)	171
BanI	GGYRCC	1 cut(s)	1811
BanII	GRGCYC	1 cut(s)	1174
BauI	CACGAG	1 cut(s)	1677
BbrPI	CACGTG	1 cut(s)	2129
BbsI	GAAGAC	1 cut(s)	636
Bbv12I	GWGCWC	2 cut(s)	153, 1174
BbvI	GCAGC	9 cut(s)	388, 1382, 1520, 1523, 1895, 1898, 1976, 2008, 2030
BccI	CCATC	4 cut(s)	76, 858, 945, 1802
BceAI	ACGGC	1 cut(s)	267
BciT130I	CCWGG	5 cut(s)	176, 821, 904, 1649, 1789
BciVI	GTATCC	1 cut(s)	1585
BcoDI	GTCTC	8 cut(s)	660, 1038, 1173, 1778, 1854, 1888, 1991, 2126
BfaI	CTAG	6 cut(s)	770, 881, 1109, 1187, 1709, 2160
BfmI	CTRYAG	1 cut(s)	1934
BfoI	RGCGCY	1 cut(s)	1233
BfuAI	ACCTGC	3 cut(s)	641, 946, 1345
BfuI	GTATCC	1 cut(s)	1585
BglII	AGATCT	1 cut(s)	698
BmcAI	AGTACT	2 cut(s)	370, 933
Bme1390I	CCNGG	5 cut(s)	176, 821, 904, 1649, 1789
Bme18I	GGWCC	4 cut(s)	91, 403, 1249, 1333
BmeT110I	CYCGRG	2 cut(s)	72, 1176
BmgT120I	GGNCC	5 cut(s)	91, 403, 1210, 1249, 1333
BmiI	GGNNCC	8 cut(s)	92, 93, 173, 404, 1250, 1335, 1562, 1813
BmrFI	CCNGG	5 cut(s)	176, 821, 904, 1649, 1789
BmsI	GCATC	6 cut(s)	18, 388, 921, 1282, 1602, 2212
BoxI	GACNNNNGTC	1 cut(s)	1370
BpiI	GAAGAC	1 cut(s)	636
BplI	GAGNNNNNCTC	2 cut(s)	918, 950
BpmI	CTGGAG	4 cut(s)	314, 925, 1110, 1381
BpuEI	CTTGAG	1 cut(s)	1420
BsaAI	YACGTR	2 cut(s)	1471, 2129
BsaBI	GATNNNNATC	1 cut(s)	557
BsaI	GGTCTC	3 cut(s)	1778, 1888, 2126
BsaJI	CCNNGG	5 cut(s)	175, 819, 902, 1206, 1647
BsaWI	WCCGGW	1 cut(s)	1288
Bsc4I	CCNNNNNNNGG	8 cut(s)	74, 1182, 1258, 1570, 1653, 1654, 1767, 2101
Bse1I	ACTGG	4 cut(s)	764, 1127, 1873, 2195
Bse3DI	GCAATG	2 cut(s)	970, 1807
Bse8I	GATNNNNATC	1 cut(s)	557
BseAI	TCCGGA	1 cut(s)	1288
BseBI	CCWGG	5 cut(s)	176, 821, 904, 1649, 1789
BseDI	CCNNGG	5 cut(s)	175, 819, 902, 1206, 1647
BseGI	GGATG	6 cut(s)	850, 1297, 1464, 1672, 1741, 2227
BseJI	GATNNNNATC	1 cut(s)	557
BseLI	CCNNNNNNNGG	8 cut(s)	74, 1182, 1258, 1570, 1653, 1654, 1767, 2101
BseMI	GCAATG	2 cut(s)	970, 1807
BseMII	CTCAG	3 cut(s)	524, 684, 1773
BseNI	ACTGG	4 cut(s)	764, 1127, 1873, 2195
BseXI	GCAGC	9 cut(s)	388, 1382, 1520, 1523, 1895, 1898, 1976, 2008, 2030
BsgI	GTGCAG	6 cut(s)	183, 194, 275, 395, 669, 2007
BshFI	GGCC	6 cut(s)	5, 254, 1212, 1528, 1872, 1940
BshNI	GGYRCC	1 cut(s)	1811
BsiHKAI	GWGCWC	2 cut(s)	153, 1174
BsiHKCI	CYCGRG	2 cut(s)	72, 1176
BsiSI	CCGG	1 cut(s)	1289
BslFI	GGGAC	7 cut(s)	104, 468, 1004, 1262, 1319, 1766, 1845
BslI	CCNNNNNNNGG	8 cut(s)	74, 1182, 1258, 1570, 1653, 1654, 1767, 2101
BsmAI	GTCTC	8 cut(s)	660, 1038, 1173, 1778, 1854, 1888, 1991, 2126
BsmBI	CGTCTC	2 cut(s)	1038, 1854
BsmFI	GGGAC	7 cut(s)	104, 468, 1004, 1262, 1319, 1766, 1845
BsmI	GAATGC	2 cut(s)	272, 347
BsnI	GGCC	6 cut(s)	5, 254, 1212, 1528, 1872, 1940
Bso31I	GGTCTC	3 cut(s)	1778, 1888, 2126
BsoBI	CYCGRG	2 cut(s)	72, 1176
Bsp1286I	GDGCHC	2 cut(s)	153, 1174
Bsp13I	TCCGGA	1 cut(s)	1288
Bsp143I	GATC	5 cut(s)	171, 321, 698, 886, 1143
BspACI	CCGC	5 cut(s)	470, 566, 988, 1034, 1953
BspANI	GGCC	6 cut(s)	5, 254, 1212, 1528, 1872, 1940
BspCNI	CTCAG	3 cut(s)	525, 683, 1774
BspEI	TCCGGA	1 cut(s)	1288
BspLI	GGNNCC	8 cut(s)	92, 93, 173, 404, 1250, 1335, 1562, 1813
BspMAI	CTGCAG	1 cut(s)	1938
BspMI	ACCTGC	3 cut(s)	641, 946, 1345
BspPI	GGATC	4 cut(s)	166, 179, 894, 1138
BspT107I	GGYRCC	1 cut(s)	1811
BspTNI	GGTCTC	3 cut(s)	1778, 1888, 2126
BsrBI	CCGCTC	1 cut(s)	1955
BsrDI	GCAATG	2 cut(s)	970, 1807
BsrI	ACTGG	4 cut(s)	764, 1127, 1873, 2195
BssECI	CCNNGG	5 cut(s)	175, 819, 902, 1206, 1647
BssMI	GATC	5 cut(s)	171, 321, 698, 886, 1143
BssSI	CACGAG	1 cut(s)	1677
BssT1I	CCWWGG	1 cut(s)	1206
Bst2BI	CACGAG	1 cut(s)	1677
Bst2UI	CCWGG	5 cut(s)	176, 821, 904, 1649, 1789
Bst4CI	ACNGT	8 cut(s)	19, 236, 276, 373, 580, 645, 860, 2006
BstAPI	GCANNNNNTGC	2 cut(s)	197, 1942
BstBAI	YACGTR	2 cut(s)	1471, 2129
BstC8I	GCNNGC	9 cut(s)	7, 209, 522, 544, 1314, 1706, 1846, 1938, 2016
BstDEI	CTNAG	6 cut(s)	533, 670, 1160, 1782, 1835, 2155
BstF5I	GGATG	6 cut(s)	850, 1297, 1464, 1672, 1741, 2227
BstH2I	RGCGCY	1 cut(s)	1233
BstHHI	GCGC	3 cut(s)	125, 798, 1232
BstKTI	GATC	5 cut(s)	174, 324, 701, 889, 1146
BstMAI	GTCTC	8 cut(s)	660, 1038, 1173, 1778, 1854, 1888, 1991, 2126
BstMBI	GATC	5 cut(s)	171, 321, 698, 886, 1143
BstMWI	GCNNNNNNNGC	8 cut(s)	129, 197, 1192, 1520, 1820, 1942, 1961, 2165
BstNI	CCWGG	5 cut(s)	176, 821, 904, 1649, 1789
BstNSI	RCATGY	3 cut(s)	875, 1371, 1434
BstPAI	GACNNNNGTC	1 cut(s)	1370
BstSCI	CCNGG	5 cut(s)	174, 819, 902, 1647, 1787
BstSFI	CTRYAG	1 cut(s)	1934
BstV1I	GCAGC	9 cut(s)	388, 1382, 1520, 1523, 1895, 1898, 1976, 2008, 2030
BstV2I	GAAGAC	1 cut(s)	636
BstX2I	RGATCY	2 cut(s)	171, 698
BstXI	CCANNNNNNTGG	1 cut(s)	397
BstYI	RGATCY	2 cut(s)	171, 698
BsuI	GTATCC	1 cut(s)	1585
BsuRI	GGCC	6 cut(s)	5, 254, 1212, 1528, 1872, 1940
BtsCI	GGATG	6 cut(s)	850, 1297, 1464, 1672, 1741, 2227
BtsI	GCAGTG	2 cut(s)	1121, 2199
BtsIMutI	CAGTG	5 cut(s)	757, 865, 1121, 1134, 2199
BveI	ACCTGC	3 cut(s)	641, 946, 1345
Cac8I	GCNNGC	9 cut(s)	7, 209, 522, 544, 1314, 1706, 1846, 1938, 2016
CfoI	GCGC	3 cut(s)	125, 798, 1232
Cfr13I	GGNCC	5 cut(s)	91, 403, 1210, 1249, 1333
CseI	GACGC	3 cut(s)	465, 1055, 1360
CsiI	ACCWGGT	1 cut(s)	1787
Csp6I	GTAC	5 cut(s)	369, 581, 719, 932, 1404
CspCI	CAANNNNNGTGG	2 cut(s)	432, 467
CviQI	GTAC	5 cut(s)	369, 581, 719, 932, 1404
DdeI	CTNAG	6 cut(s)	533, 670, 1160, 1782, 1835, 2155
DpnI	GATC	5 cut(s)	173, 323, 700, 888, 1145
DpnII	GATC	5 cut(s)	171, 321, 698, 886, 1143
DraIII	CACNNNGTG	1 cut(s)	1535
EaeI	YGGCCR	3 cut(s)	3, 252, 1526
Ecl136II	GAGCTC	1 cut(s)	1172
Eco130I	CCWWGG	1 cut(s)	1206
Eco24I	GRGCYC	1 cut(s)	1174
Eco31I	GGTCTC	3 cut(s)	1778, 1888, 2126
Eco32I	GATATC	1 cut(s)	431
Eco47I	GGWCC	4 cut(s)	91, 403, 1249, 1333
Eco47III	AGCGCT	1 cut(s)	1231
Eco53kI	GAGCTC	1 cut(s)	1172
Eco72I	CACGTG	1 cut(s)	2129
Eco88I	CYCGRG	2 cut(s)	72, 1176
EcoICRI	GAGCTC	1 cut(s)	1172
EcoO109I	RGGNCCY	3 cut(s)	91, 1210, 1333
EcoRI	GAATTC	1 cut(s)	1284
EcoRII	CCWGG	5 cut(s)	174, 819, 902, 1647, 1787
EcoRV	GATATC	1 cut(s)	431
EcoT14I	CCWWGG	1 cut(s)	1206
EcoT22I	ATGCAT	2 cut(s)	1297, 1947
EcoT38I	GRGCYC	1 cut(s)	1174
ErhI	CCWWGG	1 cut(s)	1206
Esp3I	CGTCTC	2 cut(s)	1038, 1854
FaqI	GGGAC	7 cut(s)	104, 468, 1004, 1262, 1319, 1766, 1845
FauI	CCCGC	1 cut(s)	981
FauNDI	CATATG	2 cut(s)	298, 1297
FokI	GGATG	6 cut(s)	837, 1304, 1451, 1659, 1728, 2234
FriOI	GRGCYC	1 cut(s)	1174
FspBI	CTAG	6 cut(s)	770, 881, 1109, 1187, 1709, 2160
FspI	TGCGCA	1 cut(s)	124
GlaI	GCGC	3 cut(s)	124, 797, 1231
GsuI	CTGGAG	4 cut(s)	314, 925, 1110, 1381
HaeII	RGCGCY	1 cut(s)	1233
HaeIII	GGCC	6 cut(s)	5, 254, 1212, 1528, 1872, 1940
HapII	CCGG	1 cut(s)	1289
HgaI	GACGC	3 cut(s)	465, 1055, 1360
HhaI	GCGC	3 cut(s)	125, 798, 1232
Hin6I	GCGC	3 cut(s)	123, 796, 1230
HinP1I	GCGC	3 cut(s)	123, 796, 1230
HincII	GTYRAC	1 cut(s)	415
HindII	GTYRAC	1 cut(s)	415
HindIII	AAGCTT	1 cut(s)	2166
HinfI	GANTC	6 cut(s)	668, 744, 831, 992, 1007, 1626
HpaII	CCGG	1 cut(s)	1289
HphI	GGTGA	1 cut(s)	1547
Hpy166II	GTNNAC	5 cut(s)	415, 719, 947, 1067, 1079
Hpy188I	TCNGA	6 cut(s)	53, 281, 673, 813, 1026, 1859
Hpy188III	TCNNGA	9 cut(s)	72, 331, 1289, 1360, 1630, 1679, 1720, 2033, 2065
Hpy8I	GTNNAC	5 cut(s)	415, 719, 947, 1067, 1079
HpyAV	CCTTC	6 cut(s)	122, 725, 903, 914, 1586, 1652
HpyCH4III	ACNGT	8 cut(s)	19, 236, 276, 373, 580, 645, 860, 2006
HpyCH4IV	ACGT	4 cut(s)	1470, 1567, 1765, 2128
HpyF10VI	GCNNNNNNNGC	8 cut(s)	129, 197, 1192, 1520, 1820, 1942, 1961, 2165
HpyF3I	CTNAG	6 cut(s)	533, 670, 1160, 1782, 1835, 2155
HpySE526I	ACGT	4 cut(s)	1470, 1567, 1765, 2128
HspAI	GCGC	3 cut(s)	123, 796, 1230
KflI	GGGWCCC	1 cut(s)	91
Kpn2I	TCCGGA	1 cut(s)	1288
Kzo9I	GATC	5 cut(s)	171, 321, 698, 886, 1143
LmnI	GCTCC	8 cut(s)	539, 1129, 1177, 1279, 1566, 1841, 2128, 2209
Lsp1109I	GCAGC	9 cut(s)	388, 1382, 1520, 1523, 1895, 1898, 1976, 2008, 2030
LweI	GCATC	6 cut(s)	18, 388, 921, 1282, 1602, 2212
MabI	ACCWGGT	1 cut(s)	1787
MaeI	CTAG	6 cut(s)	770, 881, 1109, 1187, 1709, 2160
MaeII	ACGT	4 cut(s)	1470, 1567, 1765, 2128
MaeIII	GTNAC	2 cut(s)	1535, 1579
MalI	GATC	5 cut(s)	173, 323, 700, 888, 1145
MbiI	CCGCTC	1 cut(s)	1955
MboI	GATC	5 cut(s)	171, 321, 698, 886, 1143
MboII	GAAGA	4 cut(s)	275, 641, 1469, 2048
MflI	RGATCY	2 cut(s)	171, 698
MhlI	GDGCHC	2 cut(s)	153, 1174
MlsI	TGGCCA	1 cut(s)	5
MluNI	TGGCCA	1 cut(s)	5
MlyI	GAGTC	4 cut(s)	662, 825, 986, 1001
MmeI	TCCRAC	1 cut(s)	1049
Mox20I	TGGCCA	1 cut(s)	5
Mph1103I	ATGCAT	2 cut(s)	1297, 1947
MroI	TCCGGA	1 cut(s)	1288
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	4 cut(s)	143, 557, 765, 1427
MslI	CAYNNNNRTG	4 cut(s)	297, 1649, 1677, 2097
Msp20I	TGGCCA	1 cut(s)	5
MspA1I	CMGCKG	3 cut(s)	470, 1967, 2021
MspI	CCGG	1 cut(s)	1289
MspR9I	CCNGG	5 cut(s)	176, 821, 904, 1649, 1789
Mva1269I	GAATGC	2 cut(s)	272, 347
MvaI	CCWGG	5 cut(s)	176, 821, 904, 1649, 1789
MwoI	GCNNNNNNNGC	8 cut(s)	129, 197, 1192, 1520, 1820, 1942, 1961, 2165
NdeI	CATATG	2 cut(s)	298, 1297
NdeII	GATC	5 cut(s)	171, 321, 698, 886, 1143
NlaIV	GGNNCC	8 cut(s)	92, 93, 173, 404, 1250, 1335, 1562, 1813
NmeAIII	GCCGAG	1 cut(s)	1504
NmuCI	GTSAC	2 cut(s)	1535, 1579
NsbI	TGCGCA	1 cut(s)	124
NsiI	ATGCAT	2 cut(s)	1297, 1947
NspI	RCATGY	3 cut(s)	875, 1371, 1434
OliI	CACNNNNGTG	1 cut(s)	1649
PaeR7I	CTCGAG	1 cut(s)	72
PaqCI	CACCTGC	1 cut(s)	946
PcsI	WCGNNNNNNNCGW	1 cut(s)	1174
PctI	GAATGC	2 cut(s)	272, 347
PfeI	GAWTC	2 cut(s)	744, 1626
PflFI	GACNNNGTC	1 cut(s)	2075
PflMI	CCANNNNNTGG	2 cut(s)	1258, 1767
PleI	GAGTC	4 cut(s)	662, 825, 986, 1001
PmaCI	CACGTG	1 cut(s)	2129
PmlI	CACGTG	1 cut(s)	2129
PpsI	GAGTC	4 cut(s)	662, 825, 986, 1001
Ppu21I	YACGTR	2 cut(s)	1471, 2129
PpuMI	RGGWCCY	2 cut(s)	91, 1333
PshAI	GACNNNNGTC	1 cut(s)	1370
PshBI	ATTAAT	1 cut(s)	557
PsiI	TTATAA	1 cut(s)	2216
Psp124BI	GAGCTC	1 cut(s)	1174
Psp1406I	AACGTT	1 cut(s)	1765
Psp5II	RGGWCCY	2 cut(s)	91, 1333
Psp6I	CCWGG	5 cut(s)	174, 819, 902, 1647, 1787
PspCI	CACGTG	1 cut(s)	2129
PspGI	CCWGG	5 cut(s)	174, 819, 902, 1647, 1787
PspN4I	GGNNCC	8 cut(s)	92, 93, 173, 404, 1250, 1335, 1562, 1813
PspPI	GGNCC	5 cut(s)	91, 403, 1210, 1249, 1333
PspPPI	RGGWCCY	2 cut(s)	91, 1333
PstI	CTGCAG	1 cut(s)	1938
PsuI	RGATCY	2 cut(s)	171, 698
PsyI	GACNNNGTC	1 cut(s)	2075
PvuII	CAGCTG	2 cut(s)	1967, 2021
RsaI	GTAC	5 cut(s)	370, 582, 720, 933, 1405
RsaNI	GTAC	5 cut(s)	369, 581, 719, 932, 1404
RseI	CAYNNNNRTG	4 cut(s)	297, 1649, 1677, 2097
SacI	GAGCTC	1 cut(s)	1174
SaqAI	TTAA	4 cut(s)	143, 557, 765, 1427
Sau3AI	GATC	5 cut(s)	171, 321, 698, 886, 1143
Sau96I	GGNCC	5 cut(s)	91, 403, 1210, 1249, 1333
ScaI	AGTACT	2 cut(s)	370, 933
SchI	GAGTC	4 cut(s)	662, 825, 986, 1001
ScrFI	CCNGG	5 cut(s)	176, 821, 904, 1649, 1789
SduI	GDGCHC	2 cut(s)	153, 1174
SexAI	ACCWGGT	1 cut(s)	1787
SfaNI	GCATC	6 cut(s)	18, 388, 921, 1282, 1602, 2212
SfcI	CTRYAG	1 cut(s)	1934
Sfr274I	CTCGAG	1 cut(s)	72
SinI	GGWCC	4 cut(s)	91, 403, 1249, 1333
SlaI	CTCGAG	1 cut(s)	72
SmiMI	CAYNNNNRTG	4 cut(s)	297, 1649, 1677, 2097
SmlI	CTYRAG	2 cut(s)	72, 1399
SmoI	CTYRAG	2 cut(s)	72, 1399
SsiI	CCGC	5 cut(s)	470, 566, 988, 1034, 1953
SspI	AATATT	3 cut(s)	361, 976, 1378
SspMI	CTAG	6 cut(s)	770, 881, 1109, 1187, 1709, 2160
SstI	GAGCTC	1 cut(s)	1174
StyD4I	CCNGG	5 cut(s)	174, 819, 902, 1647, 1787
StyI	CCWWGG	1 cut(s)	1206
TaaI	ACNGT	8 cut(s)	19, 236, 276, 373, 580, 645, 860, 2006
TaiI	ACGT	4 cut(s)	1473, 1570, 1768, 2131
TaqI	TCGA	3 cut(s)	73, 1639, 1879
TatI	WGTACW	3 cut(s)	368, 931, 1403
TauI	GCSGC	2 cut(s)	473, 1955
TfiI	GAWTC	2 cut(s)	744, 1626
Tru1I	TTAA	4 cut(s)	143, 557, 765, 1427
Tru9I	TTAA	4 cut(s)	143, 557, 765, 1427
TscAI	CASTG	5 cut(s)	764, 865, 1121, 1134, 2206
TseFI	GTSAC	2 cut(s)	1535, 1579
TseI	GCWGC	9 cut(s)	376, 1395, 1508, 1511, 1883, 1886, 1964, 2018, 2021
Tsp45I	GTSAC	2 cut(s)	1535, 1579
TspDTI	ATGAA	8 cut(s)	103, 315, 438, 611, 1752, 1962, 1988, 2077
TspGWI	ACGGA	1 cut(s)	1567
TspRI	CASTG	5 cut(s)	764, 865, 1121, 1134, 2206
Tth111I	GACNNNGTC	1 cut(s)	2075
Van91I	CCANNNNNTGG	2 cut(s)	1258, 1767
VpaK11BI	GGWCC	4 cut(s)	91, 403, 1249, 1333
VspI	ATTAAT	1 cut(s)	557
XapI	RAATTY	2 cut(s)	751, 1284
XceI	RCATGY	3 cut(s)	875, 1371, 1434
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2192
XhoI	CTCGAG	1 cut(s)	72
XspI	CTAG	6 cut(s)	770, 881, 1109, 1187, 1709, 2160
ZrmI	AGTACT	2 cut(s)	370, 933
Zsp2I	ATGCAT	2 cut(s)	1297, 1947

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.