Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0007605

Physical Location & Seq

Genomic Coordinates Forward (+)

11875103 .. 11893893

Gene Structure 18791 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0089200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1914 bp

ATGGAGCTGAAACCAGGTCTCTCAGCTCTGGTCACCGGCGGAGCCTCCGGTATTGGGAAAGCTCTCTGCTTAGCTCTGGGAGCTAAGGGAGTGTTTGTGACAGTCGTTGATTTCTCTGAAGAAAGAGGAAAGGAAGTTGCGTCACTTGTTCAGAAAGAGAATGCTAAGTTCCATAGCAATTTGAAATTTCCATCTGCTATTTTTATCAAATGCGACGTCACGAATACAGGAGATATGACTGCTGCATTTGATGAGCATGTAGCGACATTTGGAGGTTTGGATATCTGTATTAACAGTGCAGGCATTGGTACTTCCATTCCATTCTACAAGGATCAAACTGATGGCACTCATACATGGAGACGAACAGTGAACGTGAATCTGATTGCAATTATTGATTGCACTCGCCTTGCGATTAAAACAATGCAAGCTATGCAAAAGCCTGGTGTAATTATCAATATGGGGTCTGCCTCGGGTCTTTACCCAATGATCAAGGATCCAATTTACTCTGGTTCAAAAGGTGGCGTTATTCTTTTTACCCGATCCCTTGTTTCCTACAAACGTCAAGGGATTCGTATCAATGTGCTTTGTCCAGAATTTGTGGAAACTGAGATGGGCTCACTGATCGATTCTAAATTGATTAATTTAATGGGGGGCTTTGTCCCTATGGAAATGGTGGTGAAAGGTGCTTTTAAGCTTATAACTGATGAGAGTAATGCTGGTTCATGCTTATGGATTACAAATCGGAGAGGCATGGAATATTGGCCGACCCCCACAGAAGAAAACAAATACATGGTTCGCTCTTCAAGCTCGAGGAAAAGAACTACGGCAAAAGCTCCATTCGAAACTCCTTTGAATCTTCAACTTCCACAAAGCTATGAGAAATTAGTGGTTCACACCTTGACTCACAATTTCCGTAATGCTACCCGTATAGTTCATGCACCATTGAGGTTACCGATTGGACCACATCATGTTCTTGTGAAAATCATTTATGCTGGCGTAAATGCAAGTGATGTAAATTTCAGCTCAGGGCGTTATTTCACTGGAGCCGACAAAGGCCCCCAGCTTCCATTTGATGCTGGTTTTGAGGCTGTGGGGATAATTGCAGCAGTAGGGGAATCTGTCACTAACTTGAAAATTGGTACTCCTGCTGCAATCATGACTTTTGGAAGTTATGCTGAATTCATGATGGTGCCTTCAAAACACATCCTTCCTGTGGAAAGACCAGATCCAGAAGTCGTCGCTATGCTTACTTCAGGACTAACAGCATCAATCGCTTTAGAAAAGGCGGGTGGACAATTGGAATCTGGACAAGTAGTTCTTGTTACTGCTGCTGCTGGAGGGACTGGGCAATTTGCAGTCCAGCTTGCAAAACTAGCTGGAAATAAAGTGGTTGCAACTTGTGGAGGTGCAGACAAGGCAAAGCTTTTAAAAGAATTGGGGGTTGATCGAGTCATAGATTATAAAGCTGAAGACATAAAAATCGTTCTAAAAAAAGAGTTTCCAAAAGGTATCGACATTATCTACGAGTCAGTTGGTGGTCACATGTTCGATTTGTGCTTGAATGCTCTGGCAGTTTATGGGCGACTCATTGTAATTGGAATGATTTCTCAGTATCAAGGAGAGCATGGGTGGAAGCCGTCAAACTACCCTGGAATTTGTGAGAAGCTTTTAGCTAAAAGCCAAACTGTGGCTGGGTTCTTCTTAGTACAATATAGTCAGTTCTGGCAAGAACACCTGGATAAACTCGTTCATCTTTTCTCTGAAGGAAAACTGAAGGTTTCCTTAGACCCAAAACAATTTCTTGGTGTCCATTCTGTTCCGGATGCTGTCGAGTATCTTCATTCCGGTAAAAGTGTAGGGAAGGTTGTTGTTTGCATCGATCCATCCTACAGGCAACAAACATCAAGATTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006629 GO:0007275 GO:0008150 GO:0008152 GO:0008194 GO:0008202 GO:0009058 GO:0009791 GO:0009812 GO:0009813 GO:0009845 GO:0010154 GO:0010214 GO:0015020 GO:0016020 GO:0016125 GO:0016740 GO:0016757 GO:0016758 GO:0016906 GO:0022414 GO:0031090 GO:0032501 GO:0032502 GO:0035251 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046527 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0051505 GO:0051506 GO:0051507 GO:0051508 GO:0051509 GO:0061458 GO:0071704 GO:0080043 GO:0080044 GO:0090351 GO:0098588 GO:0098805 GO:1901360 GO:1901576 GO:1901615

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_transf_28 UDPGT

Protein Analysis

637

Amino Acids

68.96

Weight (kDa)

8.83

Isoelectric Point (pI)

25.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
adh_short	PF00106	9 - 207	1.9e-42	short chain dehydrogenase
adh_short_C2	PF13561	15 - 221	3.1e-31	Enoyl-(Acyl carrier protein) reductase
ADH_N	PF08240	320 - 406	3.7e-13	Alcohol dehydrogenase GroES-like domain
ADH_zinc_N	PF00107	447 - 580	1.2e-24	Zinc-binding dehydrogenase
ADH_zinc_N_2	PF13602	479 - 624	2.2e-19	Zinc-binding dehydrogenase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0007605)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G43620 AT1G43620 AT1G43620 AT1G43620 AT1G43620 AT1G43620 AT1G43620 AT1G43620
fragaria_vesca	FvH4_2g13560 FvH4_2g13560
malus_domestica	MD05G1027200.v1.1 MD10G1026500.v1.1
prunus_persica	Prupe.8G032700_v2.0.a1
pyrus_communis	pycom05g01920 pycom10g01800
rosa_chinensis	RchiOBHm_Chr6g0275171
rosa_laevigata	RLG00000013490
rosa_multiflora	Rmu_ssc0000041.1_g000016
rosa_roxburghii	Rroxscaffold_7G00193580
rosa_rugosa	Rorug06G0089200 Rorug06G0089200
rosa_samantha	Rh6AG203200 Rh6DG198500
rosa_wichuraiana	Rw6G017630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	698, 1461
AatII	GACGTC	1 cut(s)	219
AccB1I	GGYRCC	1 cut(s)	1189
AccB7I	CCANNNNNTGG	1 cut(s)	1687
AccIII	TCCGGA	1 cut(s)	1819
AciI	CCGC	2 cut(s)	39, 1286
AclWI	GGATC	6 cut(s)	339, 488, 501, 534, 1220, 1874
AcoI	YGGCCR	1 cut(s)	761
AcsI	RAATTY	5 cut(s)	185, 593, 1015, 1178, 1653
AcuI	CTGAAG	5 cut(s)	138, 1236, 1488, 1782, 1793
AcyI	GRCGYC	1 cut(s)	216
AfaI	GTAC	3 cut(s)	310, 1141, 1707
AfiI	CCNNNNNNNGG	3 cut(s)	54, 1213, 1687
AflIII	ACRYGT	1 cut(s)	1542
AgsI	TTSAA	8 cut(s)	184, 513, 804, 853, 860, 1132, 1197, 1561
AjnI	CCWGG	4 cut(s)	13, 439, 1648, 1734
AloI	GAACNNNNNNTCC	2 cut(s)	1299, 1331
Alw26I	GTCTC	2 cut(s)	23, 352
AlwI	GGATC	6 cut(s)	339, 488, 501, 534, 1220, 1874
Ama87I	CYCGRG	2 cut(s)	469, 808
Aor13HI	TCCGGA	1 cut(s)	1819
AoxI	GGCC	2 cut(s)	761, 1054
ApeKI	GCWGC	5 cut(s)	242, 1103, 1148, 1328, 1331
ApoI	RAATTY	5 cut(s)	185, 593, 1015, 1178, 1653
ArsI	GACNNNNNNTTYG	2 cut(s)	201, 233
AseI	ATTAAT	1 cut(s)	639
Asp700I	GAANNNNTTC	1 cut(s)	1603
AspS9I	GGNCC	2 cut(s)	959, 1055
AsuHPI	GGTGA	2 cut(s)	25, 688
AsuII	TTCGAA	1 cut(s)	840
AvaI	CYCGRG	2 cut(s)	469, 808
AvaII	GGWCC	1 cut(s)	959
BamHI	GGATCC	1 cut(s)	493
BanI	GGYRCC	1 cut(s)	1189
BanII	GRGCYC	1 cut(s)	617
BbsI	GAAGAC	1 cut(s)	1476
BbvI	GCAGC	5 cut(s)	229, 1115, 1135, 1315, 1318
BccI	CCATC	5 cut(s)	199, 335, 604, 1180, 1891
BceAI	ACGGC	2 cut(s)	840, 1621
BciT130I	CCWGG	4 cut(s)	15, 441, 1650, 1736
BclI	TGATCA	1 cut(s)	486
BcoDI	GTCTC	2 cut(s)	23, 352
BfaI	CTAG	1 cut(s)	1373
BfmI	CTRYAG	1 cut(s)	1888
BisI	GCNGC	5 cut(s)	243, 1104, 1149, 1329, 1332
BlpI	GCTNAGC	1 cut(s)	70
BlsI	GCNGC	5 cut(s)	244, 1105, 1150, 1330, 1333
Bme1390I	CCNGG	4 cut(s)	15, 441, 1650, 1736
Bme18I	GGWCC	1 cut(s)	959
BmeT110I	CYCGRG	2 cut(s)	469, 808
BmgT120I	GGNCC	2 cut(s)	959, 1055
BmiI	GGNNCC	5 cut(s)	43, 495, 1045, 1057, 1191
BmrFI	CCNGG	4 cut(s)	15, 441, 1650, 1736
BmrI	ACTGGG	1 cut(s)	1353
BmsI	GCATC	4 cut(s)	1063, 1274, 1813, 1884
BmuI	ACTGGG	1 cut(s)	1353
BpiI	GAAGAC	1 cut(s)	1476
BplI	GAGNNNNNCTC	2 cut(s)	599, 631
BpmI	CTGGAG	2 cut(s)	1062, 1356
Bpu10I	CCTNAGC	2 cut(s)	84, 1024
Bpu1102I	GCTNAGC	1 cut(s)	70
Bpu14I	TTCGAA	1 cut(s)	840
Bsa29I	ATCGAT	2 cut(s)	624, 1878
BsaBI	GATNNNNATC	1 cut(s)	572
BsaHI	GRCGYC	1 cut(s)	216
BsaI	GGTCTC	1 cut(s)	23
BsaJI	CCNNGG	2 cut(s)	468, 1648
BsaWI	WCCGGW	3 cut(s)	47, 1819, 1844
BsaXI	ACNNNNNCTCC	2 cut(s)	81, 111
Bsc4I	CCNNNNNNNGG	3 cut(s)	54, 1213, 1687
Bse118I	RCCGGY	1 cut(s)	35
Bse1I	ACTGG	2 cut(s)	1045, 1348
Bse8I	GATNNNNATC	1 cut(s)	572
BseAI	TCCGGA	1 cut(s)	1819
BseBI	CCWGG	4 cut(s)	15, 441, 1650, 1736
BseCI	ATCGAT	2 cut(s)	624, 1878
BseDI	CCNNGG	2 cut(s)	468, 1648
BseGI	GGATG	3 cut(s)	1203, 1828, 1883
BseJI	GATNNNNATC	1 cut(s)	572
BseLI	CCNNNNNNNGG	3 cut(s)	54, 1213, 1687
BseMII	CTCAG	4 cut(s)	36, 597, 1038, 1622
BseNI	ACTGG	2 cut(s)	1045, 1348
BseXI	GCAGC	5 cut(s)	229, 1115, 1135, 1315, 1318
BseYI	CCCAGC	2 cut(s)	1059, 1691
BsgI	GTGCAG	2 cut(s)	318, 1428
BshFI	GGCC	2 cut(s)	763, 1056
BshNI	GGYRCC	1 cut(s)	1189
BshVI	ATCGAT	2 cut(s)	624, 1878
BsiHKCI	CYCGRG	2 cut(s)	469, 808
BsiSI	CCGG	4 cut(s)	36, 48, 1820, 1845
BslFI	GGGAC	2 cut(s)	644, 1354
BslI	CCNNNNNNNGG	3 cut(s)	54, 1213, 1687
BsmAI	GTCTC	2 cut(s)	23, 352
BsmBI	CGTCTC	1 cut(s)	352
BsmFI	GGGAC	2 cut(s)	644, 1354
BsmI	GAATGC	2 cut(s)	166, 1567
BsnI	GGCC	2 cut(s)	763, 1056
Bso31I	GGTCTC	1 cut(s)	23
BsoBI	CYCGRG	2 cut(s)	469, 808
Bsp119I	TTCGAA	1 cut(s)	840
Bsp1286I	GDGCHC	1 cut(s)	617
Bsp13I	TCCGGA	1 cut(s)	1819
Bsp143I	GATC	8 cut(s)	331, 486, 493, 539, 621, 1225, 1444, 1879
Bsp1720I	GCTNAGC	1 cut(s)	70
BspACI	CCGC	2 cut(s)	39, 1286
BspANI	GGCC	2 cut(s)	763, 1056
BspCNI	CTCAG	4 cut(s)	35, 598, 1037, 1621
BspDI	ATCGAT	2 cut(s)	624, 1878
BspEI	TCCGGA	1 cut(s)	1819
BspHI	TCATGA	2 cut(s)	1155, 1182
BspLI	GGNNCC	5 cut(s)	43, 495, 1045, 1057, 1191
BspPI	GGATC	6 cut(s)	339, 488, 501, 534, 1220, 1874
BspQI	GCTCTTC	1 cut(s)	805
BspT104I	TTCGAA	1 cut(s)	840
BspT107I	GGYRCC	1 cut(s)	1189
BspTNI	GGTCTC	1 cut(s)	23
BsrFI	RCCGGY	1 cut(s)	35
BsrI	ACTGG	2 cut(s)	1045, 1348
BssAI	RCCGGY	1 cut(s)	35
BssECI	CCNNGG	2 cut(s)	468, 1648
BssMI	GATC	8 cut(s)	331, 486, 493, 539, 621, 1225, 1444, 1879
BssNI	GRCGYC	1 cut(s)	216
Bst2UI	CCWGG	4 cut(s)	15, 441, 1650, 1736
Bst4CI	ACNGT	4 cut(s)	103, 296, 367, 1687
Bst6I	CTCTTC	1 cut(s)	805
BstACI	GRCGYC	1 cut(s)	216
BstAPI	GCANNNNNTGC	1 cut(s)	430
BstBI	TTCGAA	1 cut(s)	840
BstC8I	GCNNGC	4 cut(s)	301, 426, 994, 1365
BstDEI	CTNAG	9 cut(s)	22, 70, 84, 165, 606, 1024, 1608, 1702, 1783
BstEII	GGTNACC	2 cut(s)	31, 948
BstF5I	GGATG	3 cut(s)	1203, 1828, 1883
BstKTI	GATC	8 cut(s)	334, 489, 496, 542, 624, 1228, 1447, 1882
BstMAI	GTCTC	2 cut(s)	23, 352
BstMBI	GATC	8 cut(s)	331, 486, 493, 539, 621, 1225, 1444, 1879
BstMWI	GCNNNNNNNGC	6 cut(s)	80, 430, 804, 1271, 1373, 1415
BstNI	CCWGG	4 cut(s)	15, 441, 1650, 1736
BstNSI	RCATGY	2 cut(s)	260, 1546
BstPI	GGTNACC	2 cut(s)	31, 948
BstSCI	CCNGG	4 cut(s)	13, 439, 1648, 1734
BstSFI	CTRYAG	1 cut(s)	1888
BstV1I	GCAGC	5 cut(s)	229, 1115, 1135, 1315, 1318
BstV2I	GAAGAC	1 cut(s)	1476
BstX2I	RGATCY	2 cut(s)	493, 1225
BstYI	RGATCY	2 cut(s)	493, 1225
Bsu15I	ATCGAT	2 cut(s)	624, 1878
BsuRI	GGCC	2 cut(s)	763, 1056
BsuTUI	ATCGAT	2 cut(s)	624, 1878
BtsCI	GGATG	3 cut(s)	1203, 1828, 1883
BtsIMutI	CAGTG	4 cut(s)	301, 372, 617, 1038
Cac8I	GCNNGC	4 cut(s)	301, 426, 994, 1365
CciI	TCATGA	2 cut(s)	1155, 1182
Cfr10I	RCCGGY	1 cut(s)	35
Cfr13I	GGNCC	2 cut(s)	959, 1055
ClaI	ATCGAT	2 cut(s)	624, 1878
CseI	GACGC	1 cut(s)	129
CsiI	ACCWGGT	1 cut(s)	13
Csp6I	GTAC	3 cut(s)	309, 1140, 1706
CviQI	GTAC	3 cut(s)	309, 1140, 1706
DdeI	CTNAG	9 cut(s)	22, 70, 84, 165, 606, 1024, 1608, 1702, 1783
DpnI	GATC	8 cut(s)	333, 488, 495, 541, 623, 1227, 1446, 1881
DpnII	GATC	8 cut(s)	331, 486, 493, 539, 621, 1225, 1444, 1879
DraI	TTTAAA	1 cut(s)	1428
EaeI	YGGCCR	1 cut(s)	761
Eam1104I	CTCTTC	1 cut(s)	805
EarI	CTCTTC	1 cut(s)	805
EciI	GGCGGA	1 cut(s)	54
Eco24I	GRGCYC	1 cut(s)	617
Eco31I	GGTCTC	1 cut(s)	23
Eco32I	GATATC	1 cut(s)	283
Eco47I	GGWCC	1 cut(s)	959
Eco57I	CTGAAG	5 cut(s)	138, 1236, 1488, 1782, 1793
Eco88I	CYCGRG	2 cut(s)	469, 808
Eco91I	GGTNACC	2 cut(s)	31, 948
EcoO109I	RGGNCCY	1 cut(s)	1055
EcoO65I	GGTNACC	2 cut(s)	31, 948
EcoRI	GAATTC	1 cut(s)	1178
EcoRII	CCWGG	4 cut(s)	13, 439, 1648, 1734
EcoRV	GATATC	1 cut(s)	283
EcoT38I	GRGCYC	1 cut(s)	617
Esp3I	CGTCTC	1 cut(s)	352
FalI	AAGNNNNNCTT	4 cut(s)	1302, 1334, 1766, 1798
FaqI	GGGAC	2 cut(s)	644, 1354
FauI	CCCGC	1 cut(s)	1279
FbaI	TGATCA	1 cut(s)	486
Fnu4HI	GCNGC	5 cut(s)	243, 1104, 1149, 1329, 1332
FokI	GGATG	3 cut(s)	1190, 1835, 1870
FriOI	GRGCYC	1 cut(s)	617
Fsp4HI	GCNGC	5 cut(s)	243, 1104, 1149, 1329, 1332
FspBI	CTAG	1 cut(s)	1373
GluI	GCNGC	5 cut(s)	243, 1104, 1149, 1329, 1332
GsaI	CCCAGC	2 cut(s)	1063, 1695
GsuI	CTGGAG	2 cut(s)	1062, 1356
HaeIII	GGCC	2 cut(s)	763, 1056
HapII	CCGG	4 cut(s)	36, 48, 1820, 1845
HgaI	GACGC	1 cut(s)	129
Hin1I	GRCGYC	1 cut(s)	216
HindIII	AAGCTT	3 cut(s)	692, 1421, 1664
HpaII	CCGG	4 cut(s)	36, 48, 1820, 1845
HphI	GGTGA	2 cut(s)	25, 688
Hpy166II	GTNNAC	3 cut(s)	370, 892, 1292
Hpy188I	TCNGA	5 cut(s)	118, 153, 381, 744, 1762
Hpy188III	TCNNGA	9 cut(s)	220, 590, 1156, 1183, 1229, 1254, 1305, 1820, 1905
Hpy8I	GTNNAC	3 cut(s)	370, 892, 1292
Hpy99I	CGWCG	2 cut(s)	218, 1241
HpyAV	CCTTC	5 cut(s)	1203, 1217, 1757, 1768, 1855
HpyCH4III	ACNGT	4 cut(s)	103, 296, 367, 1687
HpyCH4IV	ACGT	3 cut(s)	216, 372, 559
HpyF10VI	GCNNNNNNNGC	6 cut(s)	80, 430, 804, 1271, 1373, 1415
HpyF3I	CTNAG	9 cut(s)	22, 70, 84, 165, 606, 1024, 1608, 1702, 1783
HpySE526I	ACGT	3 cut(s)	216, 372, 559
Hsp92I	GRCGYC	1 cut(s)	216
Kpn2I	TCCGGA	1 cut(s)	1819
Ksp22I	TGATCA	1 cut(s)	486
Kzo9I	GATC	8 cut(s)	331, 486, 493, 539, 621, 1225, 1444, 1879
LguI	GCTCTTC	1 cut(s)	805
LmnI	GCTCC	5 cut(s)	4, 41, 80, 838, 1043
Lsp1109I	GCAGC	5 cut(s)	229, 1115, 1135, 1315, 1318
LweI	GCATC	4 cut(s)	1063, 1274, 1813, 1884
MabI	ACCWGGT	1 cut(s)	13
MaeI	CTAG	1 cut(s)	1373
MaeII	ACGT	3 cut(s)	216, 372, 559
MaeIII	GTNAC	8 cut(s)	31, 97, 141, 217, 948, 1120, 1321, 1538
MalI	GATC	8 cut(s)	333, 488, 495, 541, 623, 1227, 1446, 1881
MboI	GATC	8 cut(s)	331, 486, 493, 539, 621, 1225, 1444, 1879
MboII	GAAGA	7 cut(s)	131, 788, 792, 848, 1481, 1690, 1829
MfeI	CAATTG	1 cut(s)	1295
MflI	RGATCY	2 cut(s)	493, 1225
MhlI	GDGCHC	1 cut(s)	617
MlyI	GAGTC	4 cut(s)	895, 1458, 1535, 1578
MroI	TCCGGA	1 cut(s)	1819
MroXI	GAANNNNTTC	1 cut(s)	1603
MseI	TTAA	6 cut(s)	291, 414, 639, 644, 690, 1427
MslI	CAYNNNNRTG	2 cut(s)	727, 1187
MspI	CCGG	4 cut(s)	36, 48, 1820, 1845
MspR9I	CCNGG	4 cut(s)	15, 441, 1650, 1736
MunI	CAATTG	1 cut(s)	1295
Mva1269I	GAATGC	2 cut(s)	166, 1567
MvaI	CCWGG	4 cut(s)	15, 441, 1650, 1736
MwoI	GCNNNNNNNGC	6 cut(s)	80, 430, 804, 1271, 1373, 1415
NdeII	GATC	8 cut(s)	331, 486, 493, 539, 621, 1225, 1444, 1879
NlaIV	GGNNCC	5 cut(s)	43, 495, 1045, 1057, 1191
NmuCI	GTSAC	6 cut(s)	31, 97, 141, 217, 1120, 1538
NspI	RCATGY	2 cut(s)	260, 1546
NspV	TTCGAA	1 cut(s)	840
PaeR7I	CTCGAG	1 cut(s)	808
PagI	TCATGA	2 cut(s)	1155, 1182
PciI	ACATGT	1 cut(s)	1542
PciSI	GCTCTTC	1 cut(s)	805
PctI	GAATGC	2 cut(s)	166, 1567
PdmI	GAANNNNTTC	1 cut(s)	1603
PfeI	GAWTC	6 cut(s)	376, 568, 626, 853, 1115, 1301
PflMI	CCANNNNNTGG	1 cut(s)	1687
PkrI	GCNGC	5 cut(s)	244, 1105, 1150, 1330, 1333
PleI	GAGTC	4 cut(s)	895, 1457, 1534, 1578
PpsI	GAGTC	4 cut(s)	895, 1457, 1534, 1578
PscI	ACATGT	1 cut(s)	1542
PshBI	ATTAAT	1 cut(s)	639
PsiI	TTATAA	2 cut(s)	698, 1461
Psp6I	CCWGG	4 cut(s)	13, 439, 1648, 1734
PspEI	GGTNACC	2 cut(s)	31, 948
PspFI	CCCAGC	2 cut(s)	1059, 1691
PspGI	CCWGG	4 cut(s)	13, 439, 1648, 1734
PspN4I	GGNNCC	5 cut(s)	43, 495, 1045, 1057, 1191
PspPI	GGNCC	2 cut(s)	959, 1055
PspXI	VCTCGAGB	1 cut(s)	808
PsrI	GAACNNNNNNTAC	2 cut(s)	703, 735
PsuI	RGATCY	2 cut(s)	493, 1225
RsaI	GTAC	3 cut(s)	310, 1141, 1707
RsaNI	GTAC	3 cut(s)	309, 1140, 1706
RseI	CAYNNNNRTG	2 cut(s)	727, 1187
SapI	GCTCTTC	1 cut(s)	805
SaqAI	TTAA	6 cut(s)	291, 414, 639, 644, 690, 1427
SatI	GCNGC	5 cut(s)	243, 1104, 1149, 1329, 1332
Sau3AI	GATC	8 cut(s)	331, 486, 493, 539, 621, 1225, 1444, 1879
Sau96I	GGNCC	2 cut(s)	959, 1055
SchI	GAGTC	4 cut(s)	895, 1458, 1535, 1578
ScrFI	CCNGG	4 cut(s)	15, 441, 1650, 1736
SduI	GDGCHC	1 cut(s)	617
SexAI	ACCWGGT	1 cut(s)	13
SfaNI	GCATC	4 cut(s)	1063, 1274, 1813, 1884
SfcI	CTRYAG	1 cut(s)	1888
Sfr274I	CTCGAG	1 cut(s)	808
SfuI	TTCGAA	1 cut(s)	840
SgrAI	CRCCGGYG	1 cut(s)	35
SinI	GGWCC	1 cut(s)	959
SlaI	CTCGAG	1 cut(s)	808
SmiMI	CAYNNNNRTG	2 cut(s)	727, 1187
SmlI	CTYRAG	1 cut(s)	808
SmoI	CTYRAG	1 cut(s)	808
SsiI	CCGC	2 cut(s)	39, 1286
SspI	AATATT	1 cut(s)	758
SspMI	CTAG	1 cut(s)	1373
StyD4I	CCNGG	4 cut(s)	13, 439, 1648, 1734
TaaI	ACNGT	4 cut(s)	103, 296, 367, 1687
TaiI	ACGT	3 cut(s)	219, 375, 562
TaqI	TCGA	8 cut(s)	624, 809, 840, 1447, 1512, 1548, 1830, 1878
TatI	WGTACW	1 cut(s)	1705
TfiI	GAWTC	6 cut(s)	376, 568, 626, 853, 1115, 1301
Tru1I	TTAA	6 cut(s)	291, 414, 639, 644, 690, 1427
Tru9I	TTAA	6 cut(s)	291, 414, 639, 644, 690, 1427
TscAI	CASTG	4 cut(s)	301, 372, 624, 1045
TseFI	GTSAC	6 cut(s)	31, 97, 141, 217, 1120, 1538
TseI	GCWGC	5 cut(s)	242, 1103, 1148, 1328, 1331
Tsp45I	GTSAC	6 cut(s)	31, 97, 141, 217, 1120, 1538
TspDTI	ATGAA	5 cut(s)	711, 923, 1171, 1739, 1829
TspGWI	ACGGA	1 cut(s)	902
TspRI	CASTG	4 cut(s)	301, 372, 624, 1045
Van91I	CCANNNNNTGG	1 cut(s)	1687
VpaK11BI	GGWCC	1 cut(s)	959
VspI	ATTAAT	1 cut(s)	639
XapI	RAATTY	5 cut(s)	185, 593, 1015, 1178, 1653
XceI	RCATGY	2 cut(s)	260, 1546
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1688
XhoI	CTCGAG	1 cut(s)	808
XmnI	GAANNNNTTC	1 cut(s)	1603
XspI	CTAG	1 cut(s)	1373
ZraI	GACGTC	1 cut(s)	217

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.