Rorug07G0269400

RESISTANCE protein

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Forward (+)
25436416 .. 25439823
3408 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0269400.1

Sequence Viewer

Length: 1005 bp
ATGCAGAATGTGGGGACTTGGACTATGCCCGCGAGGTGTTTGATGATATGCTTGAGAGAAGTACCGTGTCGGGGACTTGGTTCGATTTTTGGTTATGGTGGGAGGAATATGCCAAAGAAGGCCGTTGCTTTGTTTTTTGAGATGGTGGCTGCCGGTATTAAGCCTAATTCGGTGACTATGGTGTGTGTCAATTCTGCTTGCGCAAAGTTGAAGGATGTTATGTTGAGTGAGAGGATTAAAGAGTTGACTGGGGCACGGGACCCATTAGGACTCTTAGTGGCTCCGCCCCTGCTAATATGCTTGTGGTCACTTGTTGATATGTATGTGAAATGTGGAGCTACTGATGCTGCAAAACGGCTTTTTGCTGAATGTGTGGATAAAAACTTGGTTCTTTACAATATGATTTTGTCAAATTATGTGCGCCAGGGACTGGCTAGTGAAGCAGTTTCGGTCATGGGTGAAATGCTACAACAGGGCCTAAGACCCGACAAGACTGAGGGAATAAAAGCAGATAGGGTGACCATGGTGGAGCTGTTCAAGAACATGGCAATAAGAGATGTTTCTGCTTGGACAGCAGCCATTGGAGCAATGGCCATGGAAGGAAATGAGGAGCGAGCTCTAGAGCTTTTTGATGACATGCTTAAGCAAGCGGTGAAACCAGATGCTGTCTTTGTGGCAATCATTTGCACACCGCTTTGTGTCAGAGGGGAATTGAGACCTTCAGAGATAAATAAGCTTGGAAGAGGAGAAGACATATCACAAGAGCTCCTCAAAGCAATTGAGGAAAAATCAAAAAGGCAGGAGGTTAGAGTGGTTTTCTACAAGGTGGATCCATCAGATGTACGGCACCAAAGAGGTGCTTTCGGTGACGCATTTGCTACACTTTATCAATGGAAATACAAGGATAGCATGGGCAAATGGAGGAAGGCTCTTGAGGAAGCAGCAGATTTGTCTGGATGGCCTTTCAAGGATGACGAGTATGTCTTTAACCCCTCCACTAGCTAG

Protein Analysis

334

Amino Acids

37.17

Weight (kDa)

7.96

Isoelectric Point (pI)

32.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 128 - 164 4.7e-06 PPR repeat family
PPR_2 PF13041 185 - 223 4.9e-06 PPR repeat family
TIR PF01582 255 - 323 5.2e-11 TIR domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0029332)

Species Orthologous Gene IDs
pyrus_communis pycom07g23480
rosa_rugosa Rorug07G0269400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 980
Acc16I TGCGCA 1 cut(s) 202
AccB1I GGYRCC 1 cut(s) 846
AccB7I CCANNNNNTGG 1 cut(s) 430
AccII CGCG 1 cut(s) 32
AciI CCGC 4 cut(s) 30, 284, 650, 692
AclWI GGATC 2 cut(s) 824, 837
AcoI YGGCCR 1 cut(s) 591
AcuI CTGAAG 1 cut(s) 705
AfaI GTAC 2 cut(s) 63, 843
AfiI CCNNNNNNNGG 2 cut(s) 71, 430
AflII CTTAAG 1 cut(s) 641
AgsI TTSAA 3 cut(s) 211, 538, 967
AjnI CCWGG 1 cut(s) 423
AluBI AGCT 7 cut(s) 338, 532, 617, 625, 736, 766, 1002
AluI AGCT 7 cut(s) 338, 532, 617, 625, 736, 766, 1002
Alw21I GWGCWC 2 cut(s) 619, 768
Alw26I GTCTC 1 cut(s) 709
AlwI GGATC 2 cut(s) 824, 837
AlwNI CAGNNNCTG 2 cut(s) 430, 665
AoxI GGCC 4 cut(s) 120, 475, 591, 959
ApeKI GCWGC 4 cut(s) 149, 347, 575, 941
AspLEI GCGC 2 cut(s) 203, 423
AspS9I GGNCC 2 cut(s) 259, 475
AsuHPI GGTGA 5 cut(s) 184, 470, 529, 664, 878
AvaII GGWCC 1 cut(s) 259
BaeGI GKGCMC 1 cut(s) 256
BalI TGGCCA 1 cut(s) 593
BamHI GGATCC 1 cut(s) 829
BanI GGYRCC 1 cut(s) 846
BanII GRGCYC 2 cut(s) 619, 768
BbsI GAAGAC 1 cut(s) 756
Bbv12I GWGCWC 2 cut(s) 619, 768
BbvI GCAGC 4 cut(s) 136, 334, 587, 953
BccI CCATC 3 cut(s) 136, 841, 951
BceAI ACGGC 3 cut(s) 107, 371, 860
BciT130I CCWGG 1 cut(s) 425
BcoDI GTCTC 1 cut(s) 709
BfaI CTAG 4 cut(s) 435, 620, 999, 1003
BfrI CTTAAG 1 cut(s) 641
BisI GCNGC 4 cut(s) 150, 348, 576, 942
BlsI GCNGC 4 cut(s) 151, 349, 577, 943
Bme1390I CCNGG 1 cut(s) 425
Bme18I GGWCC 1 cut(s) 259
BmgT120I GGNCC 2 cut(s) 259, 475
BmiI GGNNCC 5 cut(s) 260, 261, 282, 831, 848
BmrFI CCNGG 1 cut(s) 425
BmrI ACTGGG 1 cut(s) 258
BmsI GCATC 2 cut(s) 334, 652
BmuI ACTGGG 1 cut(s) 258
BpiI GAAGAC 1 cut(s) 756
BplI GAGNNNNNCTC 2 cut(s) 913, 945
BpuEI CTTGAG 2 cut(s) 73, 953
BsaI GGTCTC 1 cut(s) 709
BsaJI CCNNGG 3 cut(s) 424, 522, 594
BsaXI ACNNNNNCTCC 2 cut(s) 750, 780
Bsc4I CCNNNNNNNGG 2 cut(s) 71, 430
Bse118I RCCGGY 1 cut(s) 152
Bse1I ACTGG 2 cut(s) 253, 435
Bse3DI GCAATG 1 cut(s) 594
BseBI CCWGG 1 cut(s) 425
BseDI CCNNGG 3 cut(s) 424, 522, 594
BseGI GGATG 3 cut(s) 220, 962, 976
BseLI CCNNNNNNNGG 2 cut(s) 71, 430
BseMI GCAATG 1 cut(s) 594
BseMII CTCAG 1 cut(s) 486
BseNI ACTGG 2 cut(s) 253, 435
BseRI GAGGAG 3 cut(s) 623, 758, 759
BseSI GKGCMC 1 cut(s) 256
BseXI GCAGC 4 cut(s) 136, 334, 587, 953
Bsh1236I CGCG 1 cut(s) 32
BshFI GGCC 4 cut(s) 122, 477, 593, 961
BshNI GGYRCC 1 cut(s) 846
BsiHKAI GWGCWC 2 cut(s) 619, 768
BsiSI CCGG 1 cut(s) 153
BslFI GGGAC 4 cut(s) 28, 87, 272, 441
BslI CCNNNNNNNGG 2 cut(s) 71, 430
BsmAI GTCTC 1 cut(s) 709
BsmFI GGGAC 4 cut(s) 28, 87, 272, 441
BsnI GGCC 4 cut(s) 122, 477, 593, 961
Bso31I GGTCTC 1 cut(s) 709
Bsp1286I GDGCHC 3 cut(s) 256, 619, 768
Bsp143I GATC 1 cut(s) 829
Bsp19I CCATGG 2 cut(s) 522, 594
BspACI CCGC 4 cut(s) 30, 284, 650, 692
BspANI GGCC 4 cut(s) 122, 477, 593, 961
BspCNI CTCAG 1 cut(s) 487
BspFNI CGCG 1 cut(s) 32
BspLI GGNNCC 5 cut(s) 260, 261, 282, 831, 848
BspPI GGATC 2 cut(s) 824, 837
BspT107I GGYRCC 1 cut(s) 846
BspTI CTTAAG 1 cut(s) 641
BspTNI GGTCTC 1 cut(s) 709
BsrDI GCAATG 1 cut(s) 594
BsrFI RCCGGY 1 cut(s) 152
BsrI ACTGG 2 cut(s) 253, 435
BssAI RCCGGY 1 cut(s) 152
BssECI CCNNGG 3 cut(s) 424, 522, 594
BssMI GATC 1 cut(s) 829
BssT1I CCWWGG 2 cut(s) 522, 594
Bst2UI CCWGG 1 cut(s) 425
Bst4CI ACNGT 1 cut(s) 66
Bst6I CTCTTC 1 cut(s) 736
BstAFI CTTAAG 1 cut(s) 641
BstC8I GCNNGC 4 cut(s) 30, 199, 615, 648
BstDEI CTNAG 3 cut(s) 274, 479, 495
BstDSI CCRYGG 2 cut(s) 522, 594
BstEII GGTNACC 1 cut(s) 517
BstF5I GGATG 3 cut(s) 220, 962, 976
BstFNI CGCG 1 cut(s) 32
BstHHI GCGC 2 cut(s) 203, 423
BstKTI GATC 1 cut(s) 832
BstMAI GTCTC 1 cut(s) 709
BstMBI GATC 1 cut(s) 829
BstMWI GCNNNNNNNGC 4 cut(s) 344, 440, 572, 584
BstNI CCWGG 1 cut(s) 425
BstNSI RCATGY 1 cut(s) 640
BstPI GGTNACC 1 cut(s) 517
BstSCI CCNGG 1 cut(s) 423
BstSLI GKGCMC 1 cut(s) 256
BstUI CGCG 1 cut(s) 32
BstV1I GCAGC 4 cut(s) 136, 334, 587, 953
BstV2I GAAGAC 1 cut(s) 756
BstX2I RGATCY 1 cut(s) 829
BstYI RGATCY 1 cut(s) 829
BsuRI GGCC 4 cut(s) 122, 477, 593, 961
BtgI CCRYGG 2 cut(s) 522, 594
BtsCI GGATG 3 cut(s) 220, 962, 976
Cac8I GCNNGC 4 cut(s) 30, 199, 615, 648
CaiI CAGNNNCTG 2 cut(s) 430, 665
CfoI GCGC 2 cut(s) 203, 423
Cfr10I RCCGGY 1 cut(s) 152
Cfr13I GGNCC 2 cut(s) 259, 475
CseI GACGC 1 cut(s) 878
Csp6I GTAC 2 cut(s) 62, 842
CviAII CATG 6 cut(s) 454, 523, 544, 595, 637, 910
CviQI GTAC 2 cut(s) 62, 842
DdeI CTNAG 3 cut(s) 274, 479, 495
DpnI GATC 1 cut(s) 831
DpnII GATC 1 cut(s) 829
DrdI GACNNNNNNGTC 1 cut(s) 980
DseDI GACNNNNNNGTC 1 cut(s) 980
EaeI YGGCCR 1 cut(s) 591
Eam1104I CTCTTC 1 cut(s) 736
EarI CTCTTC 1 cut(s) 736
EciI GGCGGA 1 cut(s) 273
Ecl136II GAGCTC 2 cut(s) 617, 766
Eco130I CCWWGG 2 cut(s) 522, 594
Eco24I GRGCYC 2 cut(s) 619, 768
Eco31I GGTCTC 1 cut(s) 709
Eco47I GGWCC 1 cut(s) 259
Eco53kI GAGCTC 2 cut(s) 617, 766
Eco57I CTGAAG 1 cut(s) 705
Eco91I GGTNACC 1 cut(s) 517
EcoICRI GAGCTC 2 cut(s) 617, 766
EcoO109I RGGNCCY 2 cut(s) 259, 475
EcoO65I GGTNACC 1 cut(s) 517
EcoRII CCWGG 1 cut(s) 423
EcoT14I CCWWGG 2 cut(s) 522, 594
EcoT38I GRGCYC 2 cut(s) 619, 768
ErhI CCWWGG 2 cut(s) 522, 594
FaeI CATG 6 cut(s) 457, 526, 547, 598, 640, 913
FalI AAGNNNNNCTT 2 cut(s) 844, 876
FaqI GGGAC 4 cut(s) 28, 87, 272, 441
FatI CATG 6 cut(s) 453, 522, 543, 594, 636, 909
FauI CCCGC 1 cut(s) 37
Fnu4HI GCNGC 4 cut(s) 150, 348, 576, 942
FokI GGATG 3 cut(s) 227, 969, 983
FriOI GRGCYC 2 cut(s) 619, 768
Fsp4HI GCNGC 4 cut(s) 150, 348, 576, 942
FspBI CTAG 4 cut(s) 435, 620, 999, 1003
FspI TGCGCA 1 cut(s) 202
GlaI GCGC 2 cut(s) 202, 422
GluI GCNGC 4 cut(s) 150, 348, 576, 942
HaeIII GGCC 4 cut(s) 122, 477, 593, 961
HapII CCGG 1 cut(s) 153
HgaI GACGC 1 cut(s) 878
HhaI GCGC 2 cut(s) 203, 423
Hin1II CATG 6 cut(s) 457, 526, 547, 598, 640, 913
Hin6I GCGC 2 cut(s) 201, 421
HinP1I GCGC 2 cut(s) 201, 421
HincII GTYRAC 1 cut(s) 246
HindII GTYRAC 1 cut(s) 246
HindIII AAGCTT 1 cut(s) 734
HinfI GANTC 1 cut(s) 270
HpaII CCGG 1 cut(s) 153
HphI GGTGA 5 cut(s) 184, 470, 529, 664, 878
Hpy166II GTNNAC 1 cut(s) 246
Hpy188I TCNGA 3 cut(s) 704, 724, 838
Hpy188III TCNNGA 4 cut(s) 538, 620, 932, 954
Hpy8I GTNNAC 1 cut(s) 246
HpyAV CCTTC 5 cut(s) 112, 205, 593, 729, 919
HpyCH4III ACNGT 1 cut(s) 66
HpyCH4V TGCA 3 cut(s) 4, 350, 687
HpyF10VI GCNNNNNNNGC 4 cut(s) 344, 440, 572, 584
HpyF3I CTNAG 3 cut(s) 274, 479, 495
Hsp92II CATG 6 cut(s) 457, 526, 547, 598, 640, 913
HspAI GCGC 2 cut(s) 201, 421
KflI GGGWCCC 1 cut(s) 259
Kzo9I GATC 1 cut(s) 829
LmnI GCTCC 6 cut(s) 286, 335, 529, 584, 610, 771
Lsp1109I GCAGC 4 cut(s) 136, 334, 587, 953
LweI GCATC 2 cut(s) 334, 652
MaeI CTAG 4 cut(s) 435, 620, 999, 1003
MaeIII GTNAC 4 cut(s) 172, 306, 517, 866
MalI GATC 1 cut(s) 831
MboI GATC 1 cut(s) 829
MboII GAAGA 2 cut(s) 753, 761
MfeI CAATTG 1 cut(s) 777
MflI RGATCY 1 cut(s) 829
MhlI GDGCHC 3 cut(s) 256, 619, 768
MlsI TGGCCA 1 cut(s) 593
MluCI AATT 5 cut(s) 166, 190, 412, 710, 777
MluNI TGGCCA 1 cut(s) 593
MlyI GAGTC 1 cut(s) 264
Mox20I TGGCCA 1 cut(s) 593
MscI TGGCCA 1 cut(s) 593
MseI TTAA 4 cut(s) 159, 237, 642, 987
Msp20I TGGCCA 1 cut(s) 593
MspCI CTTAAG 1 cut(s) 641
MspI CCGG 1 cut(s) 153
MspR9I CCNGG 1 cut(s) 425
MunI CAATTG 1 cut(s) 777
MvaI CCWGG 1 cut(s) 425
MvnI CGCG 1 cut(s) 32
MwoI GCNNNNNNNGC 4 cut(s) 344, 440, 572, 584
NcoI CCATGG 2 cut(s) 522, 594
NdeII GATC 1 cut(s) 829
NlaIII CATG 6 cut(s) 457, 526, 547, 598, 640, 913
NlaIV GGNNCC 5 cut(s) 260, 261, 282, 831, 848
NmuCI GTSAC 4 cut(s) 172, 306, 517, 866
NsbI TGCGCA 1 cut(s) 202
NspI RCATGY 1 cut(s) 640
PflMI CCANNNNNTGG 1 cut(s) 430
PkrI GCNGC 4 cut(s) 151, 349, 577, 943
PleI GAGTC 1 cut(s) 264
PpsI GAGTC 1 cut(s) 264
PpuMI RGGWCCY 1 cut(s) 259
Psp124BI GAGCTC 2 cut(s) 619, 768
Psp5II RGGWCCY 1 cut(s) 259
Psp6I CCWGG 1 cut(s) 423
PspEI GGTNACC 1 cut(s) 517
PspGI CCWGG 1 cut(s) 423
PspN4I GGNNCC 5 cut(s) 260, 261, 282, 831, 848
PspPI GGNCC 2 cut(s) 259, 475
PspPPI RGGWCCY 1 cut(s) 259
PstNI CAGNNNCTG 2 cut(s) 430, 665
PsuI RGATCY 1 cut(s) 829
RsaI GTAC 2 cut(s) 63, 843
RsaNI GTAC 2 cut(s) 62, 842
SacI GAGCTC 2 cut(s) 619, 768
SaqAI TTAA 4 cut(s) 159, 237, 642, 987
SatI GCNGC 4 cut(s) 150, 348, 576, 942
Sau3AI GATC 1 cut(s) 829
Sau96I GGNCC 2 cut(s) 259, 475
SchI GAGTC 1 cut(s) 264
ScrFI CCNGG 1 cut(s) 425
SduI GDGCHC 3 cut(s) 256, 619, 768
SfaNI GCATC 2 cut(s) 334, 652
SinI GGWCC 1 cut(s) 259
SmlI CTYRAG 3 cut(s) 52, 641, 932
SmoI CTYRAG 3 cut(s) 52, 641, 932
Sse9I AATT 5 cut(s) 166, 190, 412, 710, 777
SsiI CCGC 4 cut(s) 30, 284, 650, 692
SspMI CTAG 4 cut(s) 435, 620, 999, 1003
SstI GAGCTC 2 cut(s) 619, 768
StyD4I CCNGG 1 cut(s) 423
StyI CCWWGG 2 cut(s) 522, 594
TaaI ACNGT 1 cut(s) 66
TaqI TCGA 1 cut(s) 83
TaqII GACCGA 1 cut(s) 439
TasI AATT 5 cut(s) 166, 190, 412, 710, 777
Tru1I TTAA 4 cut(s) 159, 237, 642, 987
Tru9I TTAA 4 cut(s) 159, 237, 642, 987
TseFI GTSAC 4 cut(s) 172, 306, 517, 866
TseI GCWGC 4 cut(s) 149, 347, 575, 941
Tsp45I GTSAC 4 cut(s) 172, 306, 517, 866
Van91I CCANNNNNTGG 1 cut(s) 430
Vha464I CTTAAG 1 cut(s) 641
VpaK11BI GGWCC 1 cut(s) 259
XbaI TCTAGA 1 cut(s) 619
XceI RCATGY 1 cut(s) 640
XcmI CCANNNNNNNNNTGG 1 cut(s) 586
XspI CTAG 4 cut(s) 435, 620, 999, 1003
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.