E3 ubiquitin-protein ligase
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0000028.1_g000012 Rmu_sc0011910.1_g000007 |
| rosa_samantha | Rh1CG072900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 60 |
| AciI | CCGC | 6 cut(s) | 84, 93, 118, 172, 196, 222 |
| AcyI | GRCGYC | 1 cut(s) | 57 |
| AgsI | TTSAA | 4 cut(s) | 28, 190, 217, 265 |
| AjnI | CCWGG | 1 cut(s) | 267 |
| Alw26I | GTCTC | 2 cut(s) | 48, 64 |
| Ama87I | CYCGRG | 1 cut(s) | 209 |
| AoxI | GGCC | 1 cut(s) | 219 |
| ApeKI | GCWGC | 1 cut(s) | 272 |
| AsuHPI | GGTGA | 1 cut(s) | 169 |
| AsuII | TTCGAA | 1 cut(s) | 9 |
| AvaI | CYCGRG | 1 cut(s) | 209 |
| BanII | GRGCYC | 1 cut(s) | 84 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 182, 214 |
| BbsI | GAAGAC | 1 cut(s) | 197 |
| BccI | CCATC | 2 cut(s) | 104, 191 |
| BceAI | ACGGC | 1 cut(s) | 71 |
| BciT130I | CCWGG | 1 cut(s) | 269 |
| BcoDI | GTCTC | 2 cut(s) | 48, 64 |
| BfaI | CTAG | 1 cut(s) | 38 |
| BisI | GCNGC | 4 cut(s) | 93, 172, 222, 273 |
| BlsI | GCNGC | 4 cut(s) | 94, 173, 223, 274 |
| Bme1390I | CCNGG | 1 cut(s) | 269 |
| BmeT110I | CYCGRG | 1 cut(s) | 209 |
| BmrFI | CCNGG | 1 cut(s) | 269 |
| BmsI | GCATC | 1 cut(s) | 183 |
| BpiI | GAAGAC | 1 cut(s) | 197 |
| Bpu14I | TTCGAA | 1 cut(s) | 9 |
| BsaHI | GRCGYC | 1 cut(s) | 57 |
| BsaJI | CCNNGG | 1 cut(s) | 208 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 107, 137 |
| Bse1I | ACTGG | 1 cut(s) | 225 |
| BseBI | CCWGG | 1 cut(s) | 269 |
| BseDI | CCNNGG | 1 cut(s) | 208 |
| BseNI | ACTGG | 1 cut(s) | 225 |
| BseRI | GAGGAG | 4 cut(s) | 98, 115, 124, 129 |
| BshFI | GGCC | 1 cut(s) | 221 |
| BsiHKCI | CYCGRG | 1 cut(s) | 209 |
| BsmAI | GTCTC | 2 cut(s) | 48, 64 |
| BsmBI | CGTCTC | 2 cut(s) | 48, 64 |
| BsnI | GGCC | 1 cut(s) | 221 |
| BsoBI | CYCGRG | 1 cut(s) | 209 |
| Bsp119I | TTCGAA | 1 cut(s) | 9 |
| Bsp1286I | GDGCHC | 1 cut(s) | 84 |
| BspACI | CCGC | 6 cut(s) | 84, 93, 118, 172, 196, 222 |
| BspANI | GGCC | 1 cut(s) | 221 |
| BspT104I | TTCGAA | 1 cut(s) | 9 |
| BsrI | ACTGG | 1 cut(s) | 225 |
| BssECI | CCNNGG | 1 cut(s) | 208 |
| BssNI | GRCGYC | 1 cut(s) | 57 |
| Bst2UI | CCWGG | 1 cut(s) | 269 |
| Bst6I | CTCTTC | 1 cut(s) | 147 |
| BstACI | GRCGYC | 1 cut(s) | 57 |
| BstBI | TTCGAA | 1 cut(s) | 9 |
| BstC8I | GCNNGC | 1 cut(s) | 84 |
| BstMAI | GTCTC | 2 cut(s) | 48, 64 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 92 |
| BstNI | CCWGG | 1 cut(s) | 269 |
| BstSCI | CCNGG | 1 cut(s) | 267 |
| BstV2I | GAAGAC | 1 cut(s) | 197 |
| BsuRI | GGCC | 1 cut(s) | 221 |
| Cac8I | GCNNGC | 1 cut(s) | 84 |
| CviJI | RGCY | 3 cut(s) | 82, 221, 275 |
| CviKI_1 | RGCY | 3 cut(s) | 82, 221, 275 |
| Eam1104I | CTCTTC | 1 cut(s) | 147 |
| EarI | CTCTTC | 1 cut(s) | 147 |
| Eco24I | GRGCYC | 1 cut(s) | 84 |
| Eco88I | CYCGRG | 1 cut(s) | 209 |
| EcoRII | CCWGG | 1 cut(s) | 267 |
| EcoT38I | GRGCYC | 1 cut(s) | 84 |
| Esp3I | CGTCTC | 2 cut(s) | 48, 64 |
| FaiI | YATR | 1 cut(s) | 114 |
| FauI | CCCGC | 2 cut(s) | 91, 203 |
| Fnu4HI | GCNGC | 4 cut(s) | 93, 172, 222, 273 |
| FriOI | GRGCYC | 1 cut(s) | 84 |
| Fsp4HI | GCNGC | 4 cut(s) | 93, 172, 222, 273 |
| FspBI | CTAG | 1 cut(s) | 38 |
| GluI | GCNGC | 4 cut(s) | 93, 172, 222, 273 |
| HaeIII | GGCC | 1 cut(s) | 221 |
| Hin1I | GRCGYC | 1 cut(s) | 57 |
| HphI | GGTGA | 1 cut(s) | 169 |
| Hpy188III | TCNNGA | 1 cut(s) | 187 |
| Hpy99I | CGWCG | 1 cut(s) | 92 |
| HpyCH4IV | ACGT | 2 cut(s) | 57, 260 |
| HpyCH4V | TGCA | 1 cut(s) | 49 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 92 |
| HpySE526I | ACGT | 2 cut(s) | 57, 260 |
| Hsp92I | GRCGYC | 1 cut(s) | 57 |
| LpnPI | CCDG | 3 cut(s) | 238, 254, 256 |
| LweI | GCATC | 1 cut(s) | 183 |
| MaeI | CTAG | 1 cut(s) | 38 |
| MaeII | ACGT | 2 cut(s) | 57, 260 |
| MboII | GAAGA | 3 cut(s) | 23, 134, 202 |
| MhlI | GDGCHC | 1 cut(s) | 84 |
| MluCI | AATT | 1 cut(s) | 44 |
| MmeI | TCCRAC | 1 cut(s) | 177 |
| MnlI | CCTC | 7 cut(s) | 119, 136, 142, 145, 150, 173, 218 |
| MspR9I | CCNGG | 1 cut(s) | 269 |
| MvaI | CCWGG | 1 cut(s) | 269 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 92 |
| NspV | TTCGAA | 1 cut(s) | 9 |
| PkrI | GCNGC | 4 cut(s) | 94, 173, 223, 274 |
| Psp6I | CCWGG | 1 cut(s) | 267 |
| PspGI | CCWGG | 1 cut(s) | 267 |
| SatI | GCNGC | 4 cut(s) | 93, 172, 222, 273 |
| ScrFI | CCNGG | 1 cut(s) | 269 |
| SduI | GDGCHC | 1 cut(s) | 84 |
| SetI | ASST | 2 cut(s) | 60, 263 |
| SfaNI | GCATC | 1 cut(s) | 183 |
| SfuI | TTCGAA | 1 cut(s) | 9 |
| Sse9I | AATT | 1 cut(s) | 44 |
| SsiI | CCGC | 6 cut(s) | 84, 93, 118, 172, 196, 222 |
| SspMI | CTAG | 1 cut(s) | 38 |
| StyD4I | CCNGG | 1 cut(s) | 267 |
| TaiI | ACGT | 2 cut(s) | 60, 263 |
| TaqI | TCGA | 1 cut(s) | 9 |
| TasI | AATT | 1 cut(s) | 44 |
| TauI | GCSGC | 3 cut(s) | 95, 174, 224 |
| TseI | GCWGC | 1 cut(s) | 272 |
| TspDTI | ATGAA | 2 cut(s) | 30, 57 |
| XspI | CTAG | 1 cut(s) | 38 |
| ZraI | GACGTC | 1 cut(s) | 58 |