RING-type E3 ubiquitin transferase
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| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom01g23360 |
| rosa_samantha | Rh1AG455300 Rh1CG427200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 200 |
| AciI | CCGC | 2 cut(s) | 60, 78 |
| AgsI | TTSAA | 1 cut(s) | 188 |
| AjnI | CCWGG | 1 cut(s) | 143 |
| AluBI | AGCT | 3 cut(s) | 23, 124, 224 |
| AluI | AGCT | 3 cut(s) | 23, 124, 224 |
| AspS9I | GGNCC | 1 cut(s) | 110 |
| AvaII | GGWCC | 1 cut(s) | 110 |
| BbsI | GAAGAC | 1 cut(s) | 70 |
| BccI | CCATC | 2 cut(s) | 50, 113 |
| BciT130I | CCWGG | 1 cut(s) | 145 |
| BfaI | CTAG | 3 cut(s) | 32, 68, 89 |
| BisI | GCNGC | 1 cut(s) | 79 |
| BlsI | GCNGC | 1 cut(s) | 80 |
| Bme1390I | CCNGG | 1 cut(s) | 145 |
| Bme18I | GGWCC | 1 cut(s) | 110 |
| BmgT120I | GGNCC | 1 cut(s) | 110 |
| BmrFI | CCNGG | 1 cut(s) | 145 |
| BmsI | GCATC | 1 cut(s) | 25 |
| BpiI | GAAGAC | 1 cut(s) | 70 |
| BpuEI | CTTGAG | 1 cut(s) | 191 |
| Bse3DI | GCAATG | 1 cut(s) | 243 |
| BseBI | CCWGG | 1 cut(s) | 145 |
| BseMI | GCAATG | 1 cut(s) | 243 |
| BseMII | CTCAG | 1 cut(s) | 263 |
| BspACI | CCGC | 2 cut(s) | 60, 78 |
| BspCNI | CTCAG | 1 cut(s) | 262 |
| BsrDI | GCAATG | 1 cut(s) | 243 |
| Bst2UI | CCWGG | 1 cut(s) | 145 |
| Bst4CI | ACNGT | 1 cut(s) | 138 |
| BstC8I | GCNNGC | 1 cut(s) | 12 |
| BstDEI | CTNAG | 1 cut(s) | 249 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 20, 230 |
| BstNI | CCWGG | 1 cut(s) | 145 |
| BstNSI | RCATGY | 2 cut(s) | 14, 18 |
| BstSCI | CCNGG | 1 cut(s) | 143 |
| BstV2I | GAAGAC | 1 cut(s) | 70 |
| Cac8I | GCNNGC | 1 cut(s) | 12 |
| Cfr13I | GGNCC | 1 cut(s) | 110 |
| CpoI | CGGWCCG | 1 cut(s) | 110 |
| CspI | CGGWCCG | 1 cut(s) | 110 |
| CviAII | CATG | 4 cut(s) | 11, 15, 166, 270 |
| CviJI | RGCY | 5 cut(s) | 23, 104, 124, 170, 224 |
| CviKI_1 | RGCY | 5 cut(s) | 23, 104, 124, 170, 224 |
| DdeI | CTNAG | 1 cut(s) | 249 |
| EciI | GGCGGA | 1 cut(s) | 75 |
| Eco47I | GGWCC | 1 cut(s) | 110 |
| EcoRII | CCWGG | 1 cut(s) | 143 |
| EcoT22I | ATGCAT | 1 cut(s) | 16 |
| FaeI | CATG | 4 cut(s) | 14, 18, 169, 273 |
| FaiI | YATR | 7 cut(s) | 12, 16, 167, 213, 228, 230, 271 |
| FatI | CATG | 4 cut(s) | 10, 14, 165, 269 |
| FauNDI | CATATG | 1 cut(s) | 228 |
| FblI | GTMKAC | 1 cut(s) | 200 |
| Fnu4HI | GCNGC | 1 cut(s) | 79 |
| Fsp4HI | GCNGC | 1 cut(s) | 79 |
| FspBI | CTAG | 3 cut(s) | 32, 68, 89 |
| GluI | GCNGC | 1 cut(s) | 79 |
| Hin1II | CATG | 4 cut(s) | 14, 18, 169, 273 |
| HincII | GTYRAC | 1 cut(s) | 201 |
| HindII | GTYRAC | 1 cut(s) | 201 |
| HinfI | GANTC | 2 cut(s) | 197, 202 |
| Hpy166II | GTNNAC | 3 cut(s) | 134, 201, 241 |
| Hpy188I | TCNGA | 4 cut(s) | 7, 45, 114, 252 |
| Hpy188III | TCNNGA | 2 cut(s) | 32, 89 |
| Hpy8I | GTNNAC | 3 cut(s) | 134, 201, 241 |
| HpyCH4III | ACNGT | 1 cut(s) | 138 |
| HpyCH4V | TGCA | 2 cut(s) | 14, 38 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 20, 230 |
| HpyF3I | CTNAG | 1 cut(s) | 249 |
| Hsp92II | CATG | 4 cut(s) | 14, 18, 169, 273 |
| LmnI | GCTCC | 1 cut(s) | 7 |
| LpnPI | CCDG | 2 cut(s) | 130, 157 |
| LweI | GCATC | 1 cut(s) | 25 |
| MaeI | CTAG | 3 cut(s) | 32, 68, 89 |
| MaeIII | GTNAC | 2 cut(s) | 147, 265 |
| MboII | GAAGA | 3 cut(s) | 75, 265, 268 |
| MluCI | AATT | 1 cut(s) | 25 |
| MlyI | GAGTC | 2 cut(s) | 196, 206 |
| Mph1103I | ATGCAT | 1 cut(s) | 16 |
| MseI | TTAA | 1 cut(s) | 120 |
| MslI | CAYNNNNRTG | 1 cut(s) | 15 |
| MspR9I | CCNGG | 1 cut(s) | 145 |
| MvaI | CCWGG | 1 cut(s) | 145 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 20, 230 |
| NdeI | CATATG | 1 cut(s) | 228 |
| NlaIII | CATG | 4 cut(s) | 14, 18, 169, 273 |
| NmuCI | GTSAC | 1 cut(s) | 265 |
| NsiI | ATGCAT | 1 cut(s) | 16 |
| NspI | RCATGY | 2 cut(s) | 14, 18 |
| PaeI | GCATGC | 1 cut(s) | 14 |
| PkrI | GCNGC | 1 cut(s) | 80 |
| PleI | GAGTC | 2 cut(s) | 196, 205 |
| PpsI | GAGTC | 2 cut(s) | 196, 205 |
| Psp6I | CCWGG | 1 cut(s) | 143 |
| PspGI | CCWGG | 1 cut(s) | 143 |
| PspPI | GGNCC | 1 cut(s) | 110 |
| RseI | CAYNNNNRTG | 1 cut(s) | 15 |
| Rsr2I | CGGWCCG | 1 cut(s) | 110 |
| RsrII | CGGWCCG | 1 cut(s) | 110 |
| SalI | GTCGAC | 1 cut(s) | 199 |
| SaqAI | TTAA | 1 cut(s) | 120 |
| SatI | GCNGC | 1 cut(s) | 79 |
| Sau96I | GGNCC | 1 cut(s) | 110 |
| SchI | GAGTC | 2 cut(s) | 196, 206 |
| ScrFI | CCNGG | 1 cut(s) | 145 |
| SetI | ASST | 5 cut(s) | 25, 87, 126, 149, 226 |
| SfaNI | GCATC | 1 cut(s) | 25 |
| SinI | GGWCC | 1 cut(s) | 110 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 15 |
| SmlI | CTYRAG | 1 cut(s) | 206 |
| SmoI | CTYRAG | 1 cut(s) | 206 |
| SphI | GCATGC | 1 cut(s) | 14 |
| Sse9I | AATT | 1 cut(s) | 25 |
| SsiI | CCGC | 2 cut(s) | 60, 78 |
| SspMI | CTAG | 3 cut(s) | 32, 68, 89 |
| StyD4I | CCNGG | 1 cut(s) | 143 |
| TaaI | ACNGT | 1 cut(s) | 138 |
| TaqI | TCGA | 1 cut(s) | 200 |
| TaqII | GACCGA | 1 cut(s) | 98 |
| TasI | AATT | 1 cut(s) | 25 |
| TauI | GCSGC | 1 cut(s) | 81 |
| Tru1I | TTAA | 1 cut(s) | 120 |
| Tru9I | TTAA | 1 cut(s) | 120 |
| TseFI | GTSAC | 1 cut(s) | 265 |
| Tsp45I | GTSAC | 1 cut(s) | 265 |
| VpaK11BI | GGWCC | 1 cut(s) | 110 |
| XbaI | TCTAGA | 2 cut(s) | 31, 88 |
| XceI | RCATGY | 2 cut(s) | 14, 18 |
| XmiI | GTMKAC | 1 cut(s) | 200 |
| XspI | CTAG | 3 cut(s) | 32, 68, 89 |
| Zsp2I | ATGCAT | 1 cut(s) | 16 |