Rh2AG400700

proline-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Forward (+)
59834974 .. 59835477
504 bp
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UTR
Exon/CDS
Intron
Rh2AG400700.1

Sequence Viewer

Length: 504 bp
ATGACTGAGTATGACCCCCCTCCGCCTGAGTATGACCCCACTCCGCCTCCGCCTGAGTCTGACCCCCCTCCGCCTGAGTCTGACCCCCCTCCGCCTCCGCCTGAGTCTGACCCCACTCCTCCTCCGCCTGAGTCTGACCCCACTCCACCTCCGCCTGAGTATAACCCCCCTCCGTATGCCACCCCTCCGCCTGAGTCTGACCCCCCTCCGCCTCCGCCTGACCATAACCCCCCTCCGTATGCCACCCCTCCGCCTGAGTCTGACCCCCCTCCGCCTCCGCCTGACTATAAGCCCCTGCCCATAGGGAACTCGCCGTCGAGCACGCCGGTCGGGGTTATAGTCGGAGTTGCGACAGGAGGGTTCAGTGTACTTGTTGTAGTGGTCATTATCTTCTTTATCTATCGGAGACGGAAGAACAGGTTAGCGAGAGCTAATGAGTCAGGGCAACAACCCAAAGGTAATTCAAAACTTATAAGCAGAAATCTTGAAGTTCTTGCGTATTGA

Protein Analysis

167

Amino Acids

17.86

Weight (kDa)

4.31

Isoelectric Point (pI)

90.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0025546)

Species Orthologous Gene IDs
rosa_multiflora Rmu_sc0002897.1_g000007
rosa_samantha Rh2AG400700 Rh2CG387000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 473
AfaI GTAC 1 cut(s) 369
AgsI TTSAA 2 cut(s) 465, 488
AluBI AGCT 1 cut(s) 431
AluI AGCT 1 cut(s) 431
Alw21I GWGCWC 1 cut(s) 323
Alw26I GTCTC 1 cut(s) 400
Bbv12I GWGCWC 1 cut(s) 323
BceAI ACGGC 1 cut(s) 298
BcgI CGANNNNNNTGC 2 cut(s) 310, 344
BcoDI GTCTC 1 cut(s) 400
BsaXI ACNNNNNCTCC 6 cut(s) 31, 61, 106, 133, 136, 163
Bse118I RCCGGY 1 cut(s) 325
BseMII CTCAG 8 cut(s) 18, 45, 66, 93, 120, 147, 183, 246
BseRI GAGGAG 2 cut(s) 108, 111
Bsh1285I CGRYCG 1 cut(s) 330
BsiEI CGRYCG 1 cut(s) 330
BsiHKAI GWGCWC 1 cut(s) 323
BsiSI CCGG 1 cut(s) 326
BsmAI GTCTC 1 cut(s) 400
BsmBI CGTCTC 1 cut(s) 400
Bsp1286I GDGCHC 1 cut(s) 323
BspCNI CTCAG 8 cut(s) 19, 46, 67, 94, 121, 148, 184, 247
BsrFI RCCGGY 1 cut(s) 325
BssAI RCCGGY 1 cut(s) 325
BstC8I GCNNGC 1 cut(s) 323
BstDEI CTNAG 9 cut(s) 6, 27, 54, 75, 102, 129, 156, 192, 255
BstMAI GTCTC 1 cut(s) 400
BstMCI CGRYCG 1 cut(s) 330
BtsIMutI CAGTG 1 cut(s) 370
Cac8I GCNNGC 1 cut(s) 323
Cfr10I RCCGGY 1 cut(s) 325
Csp6I GTAC 1 cut(s) 368
CviJI RGCY 2 cut(s) 292, 431
CviKI_1 RGCY 2 cut(s) 292, 431
CviQI GTAC 1 cut(s) 368
DdeI CTNAG 9 cut(s) 6, 27, 54, 75, 102, 129, 156, 192, 255
Esp3I CGTCTC 1 cut(s) 400
HapII CCGG 1 cut(s) 326
HinfI GANTC 7 cut(s) 56, 77, 104, 131, 194, 257, 437
HpaII CCGG 1 cut(s) 326
Hpy166II GTNNAC 1 cut(s) 368
Hpy188I TCNGA 8 cut(s) 61, 82, 109, 136, 199, 262, 344, 405
Hpy188III TCNNGA 1 cut(s) 485
Hpy8I GTNNAC 1 cut(s) 368
Hpy99I CGWCG 1 cut(s) 319
HpyF3I CTNAG 9 cut(s) 6, 27, 54, 75, 102, 129, 156, 192, 255
MboII GAAGA 2 cut(s) 382, 424
MhlI GDGCHC 1 cut(s) 323
MluCI AATT 1 cut(s) 460
MlyI GAGTC 7 cut(s) 65, 86, 113, 140, 203, 266, 446
MmeI TCCRAC 1 cut(s) 322
MspI CCGG 1 cut(s) 326
PleI GAGTC 7 cut(s) 64, 85, 112, 139, 202, 265, 445
PpsI GAGTC 7 cut(s) 64, 85, 112, 139, 202, 265, 445
PsiI TTATAA 1 cut(s) 473
RsaI GTAC 1 cut(s) 369
RsaNI GTAC 1 cut(s) 368
SchI GAGTC 7 cut(s) 65, 86, 113, 140, 203, 266, 446
SduI GDGCHC 1 cut(s) 323
SetI ASST 4 cut(s) 151, 422, 433, 460
Sse9I AATT 1 cut(s) 460
TaqI TCGA 1 cut(s) 317
TasI AATT 1 cut(s) 460
TatI WGTACW 1 cut(s) 367
TscAI CASTG 1 cut(s) 370
TspGWI ACGGA 3 cut(s) 162, 225, 424
TspRI CASTG 1 cut(s) 370
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.