Rh2AG487000

magnesium transporter

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Forward (+)
70911691 .. 70913151
1461 bp
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UTR
Exon/CDS
Intron
Rh2AG487000.1

Sequence Viewer

Length: 315 bp
ATGGATGACCTCAAAGAGCGGCTGCTTGCATCGAAAGTCCCAAAACCTGCATCTGCTATAAACCTTCGGAAATCATCTTATCAAACATCGGCCTTTGGAAGGCAACCTTTTCAAGGTGTCGATGTTCTGGGCCTGAAGAAGTGGGGCCAGGGCTTTTTTTGTGGAGTAGAGGCTGAGAAAAGGAGGATGGCAATGGTGGAGCAGAGGCCAAACGACGTCGGAATAGCCCTTAAAATGAGTATTTTTTGTTCTGCTTTTTTGTGTCTTGAAATGACCATTTTAGCCCTTATAGTGGGCCCCCAACGTCAGATATAA

Protein Analysis

104

Amino Acids

11.58

Weight (kDa)

9.6

Isoelectric Point (pI)

41.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0024670)

Species Orthologous Gene IDs
pyrus_communis pycom10g16850
rosa_samantha Rh2AG487000 Rh2BG499400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 219
Acc36I ACCTGC 1 cut(s) 55
AccBSI CCGCTC 1 cut(s) 19
AciI CCGC 1 cut(s) 19
AcuI CTGAAG 1 cut(s) 155
AcyI GRCGYC 1 cut(s) 216
AfiI CCNNNNNNNGG 3 cut(s) 99, 113, 292
AgsI TTSAA 2 cut(s) 113, 269
AjnI CCWGG 1 cut(s) 147
AoxI GGCC 5 cut(s) 90, 130, 145, 206, 295
ApaI GGGCCC 1 cut(s) 299
ApeKI GCWGC 1 cut(s) 22
AspS9I GGNCC 4 cut(s) 130, 145, 295, 296
BaeGI GKGCMC 1 cut(s) 299
BanII GRGCYC 1 cut(s) 299
BbvI GCAGC 1 cut(s) 9
BccI CCATC 1 cut(s) 181
BciT130I CCWGG 1 cut(s) 149
BfuAI ACCTGC 1 cut(s) 55
BisI GCNGC 2 cut(s) 20, 23
BlsI GCNGC 2 cut(s) 21, 24
Bme1390I CCNGG 1 cut(s) 149
BmgT120I GGNCC 4 cut(s) 130, 145, 295, 296
BmiI GGNNCC 3 cut(s) 146, 297, 298
BmrFI CCNGG 1 cut(s) 149
BmsI GCATC 2 cut(s) 38, 59
BsaHI GRCGYC 1 cut(s) 216
BsaJI CCNNGG 1 cut(s) 148
Bsc4I CCNNNNNNNGG 3 cut(s) 99, 113, 292
Bse3DI GCAATG 1 cut(s) 198
BseBI CCWGG 1 cut(s) 149
BseDI CCNNGG 1 cut(s) 148
BseGI GGATG 2 cut(s) 10, 192
BseLI CCNNNNNNNGG 3 cut(s) 99, 113, 292
BseMI GCAATG 1 cut(s) 198
BseMII CTCAG 1 cut(s) 165
BseSI GKGCMC 1 cut(s) 299
BseXI GCAGC 1 cut(s) 9
BshFI GGCC 5 cut(s) 92, 132, 147, 208, 297
BslFI GGGAC 1 cut(s) 23
BslI CCNNNNNNNGG 3 cut(s) 99, 113, 292
BsmFI GGGAC 1 cut(s) 23
BsnI GGCC 5 cut(s) 92, 132, 147, 208, 297
Bsp120I GGGCCC 1 cut(s) 295
Bsp1286I GDGCHC 1 cut(s) 299
BspACI CCGC 1 cut(s) 19
BspANI GGCC 5 cut(s) 92, 132, 147, 208, 297
BspCNI CTCAG 1 cut(s) 166
BspLI GGNNCC 3 cut(s) 146, 297, 298
BspMI ACCTGC 1 cut(s) 55
BsrBI CCGCTC 1 cut(s) 19
BsrDI GCAATG 1 cut(s) 198
BssECI CCNNGG 1 cut(s) 148
BssNI GRCGYC 1 cut(s) 216
Bst2UI CCWGG 1 cut(s) 149
BstACI GRCGYC 1 cut(s) 216
BstC8I GCNNGC 1 cut(s) 27
BstDEI CTNAG 1 cut(s) 174
BstENI CCTNNNNNAGG 2 cut(s) 97, 111
BstF5I GGATG 2 cut(s) 10, 192
BstNI CCWGG 1 cut(s) 149
BstSCI CCNGG 1 cut(s) 147
BstSLI GKGCMC 1 cut(s) 299
BstV1I GCAGC 1 cut(s) 9
BsuRI GGCC 5 cut(s) 92, 132, 147, 208, 297
BtsCI GGATG 2 cut(s) 10, 192
BveI ACCTGC 1 cut(s) 55
Cac8I GCNNGC 1 cut(s) 27
Cfr13I GGNCC 4 cut(s) 130, 145, 295, 296
DdeI CTNAG 1 cut(s) 174
Eco24I GRGCYC 1 cut(s) 299
Eco57I CTGAAG 1 cut(s) 155
EcoNI CCTNNNNNAGG 2 cut(s) 97, 111
EcoO109I RGGNCCY 1 cut(s) 296
EcoRII CCWGG 1 cut(s) 147
EcoT38I GRGCYC 1 cut(s) 299
FaiI YATR 3 cut(s) 59, 290, 313
FalI AAGNNNNNCTT 2 cut(s) 91, 123
FaqI GGGAC 1 cut(s) 23
Fnu4HI GCNGC 2 cut(s) 20, 23
FokI GGATG 2 cut(s) 17, 199
FriOI GRGCYC 1 cut(s) 299
Fsp4HI GCNGC 2 cut(s) 20, 23
GluI GCNGC 2 cut(s) 20, 23
HaeIII GGCC 5 cut(s) 92, 132, 147, 208, 297
Hin1I GRCGYC 1 cut(s) 216
Hpy188I TCNGA 3 cut(s) 69, 221, 309
Hpy188III TCNNGA 1 cut(s) 266
Hpy99I CGWCG 2 cut(s) 218, 221
HpyAV CCTTC 2 cut(s) 74, 93
HpyCH4IV ACGT 2 cut(s) 216, 304
HpyCH4V TGCA 2 cut(s) 29, 50
HpyF3I CTNAG 1 cut(s) 174
HpySE526I ACGT 2 cut(s) 216, 304
Hsp92I GRCGYC 1 cut(s) 216
LmnI GCTCC 1 cut(s) 199
LpnPI CCDG 5 cut(s) 60, 113, 134, 146, 161
Lsp1109I GCAGC 1 cut(s) 9
LweI GCATC 2 cut(s) 38, 59
MaeII ACGT 2 cut(s) 216, 304
MbiI CCGCTC 1 cut(s) 19
MboII GAAGA 1 cut(s) 148
MhlI GDGCHC 1 cut(s) 299
MmeI TCCRAC 1 cut(s) 199
MnlI CCTC 4 cut(s) 20, 163, 177, 198
MseI TTAA 1 cut(s) 231
MspR9I CCNGG 1 cut(s) 149
MvaI CCWGG 1 cut(s) 149
NlaIV GGNNCC 3 cut(s) 146, 297, 298
PkrI GCNGC 2 cut(s) 21, 24
Psp6I CCWGG 1 cut(s) 147
PspGI CCWGG 1 cut(s) 147
PspN4I GGNNCC 3 cut(s) 146, 297, 298
PspOMI GGGCCC 1 cut(s) 295
PspPI GGNCC 4 cut(s) 130, 145, 295, 296
PsrI GAACNNNNNNTAC 2 cut(s) 232, 264
SaqAI TTAA 1 cut(s) 231
SatI GCNGC 2 cut(s) 20, 23
Sau96I GGNCC 4 cut(s) 130, 145, 295, 296
ScrFI CCNGG 1 cut(s) 149
SduI GDGCHC 1 cut(s) 299
SetI ASST 7 cut(s) 12, 49, 66, 109, 118, 219, 307
SfaNI GCATC 2 cut(s) 38, 59
SgeI CNNG 8 cut(s) 38, 59, 125, 140, 145, 160, 161, 278
SsiI CCGC 1 cut(s) 19
StyD4I CCNGG 1 cut(s) 147
TaiI ACGT 2 cut(s) 219, 307
TaqI TCGA 2 cut(s) 32, 120
TauI GCSGC 1 cut(s) 22
Tru1I TTAA 1 cut(s) 231
Tru9I TTAA 1 cut(s) 231
TseI GCWGC 1 cut(s) 22
XagI CCTNNNNNAGG 2 cut(s) 97, 111
ZraI GACGTC 1 cut(s) 217
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.