Rh2BG226100

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Forward (+)
21995327 .. 22012949
17623 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG226100.1

Sequence Viewer

Length: 285 bp
ATGCGAAGAAGACCTTCGAAGCTTCGTCACCACAGTTTCTCATCCCCATCAACATCTGTGCCCATATTGAGTCTTCCCAAACTCAATGGCACCAGTGCACTCGATTCTTCCTGCAGAATAGACCTTACTGATCTCTCCGCTTGTGACGCTTGCGTGGCCGCTAACTTCAAGGTTCAGCAACAGTTGATCGCCGTTGATGCCAGATCAATCATGGTCGACAATGTTCCACAAAGGGAACCACACAATCTGGCCAATGGGTCAAGAACACCAAATTCCAAACATTAG

Protein Analysis

94

Amino Acids

10.26

Weight (kDa)

9.74

Isoelectric Point (pI)

68.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0030816)

Species Orthologous Gene IDs
rosa_laevigata RLG00000017772
rosa_samantha Rh2BG226100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 89
AccI GTMKAC 1 cut(s) 216
AciI CCGC 2 cut(s) 138, 159
AcoI YGGCCR 2 cut(s) 156, 249
AcsI RAATTY 1 cut(s) 271
AgsI TTSAA 1 cut(s) 169
AluBI AGCT 1 cut(s) 22
AluI AGCT 1 cut(s) 22
Alw21I GWGCWC 1 cut(s) 100
Alw44I GTGCAC 1 cut(s) 96
AoxI GGCC 2 cut(s) 156, 249
ApaLI GTGCAC 1 cut(s) 96
ApoI RAATTY 1 cut(s) 271
Asp700I GAANNNNTTC 1 cut(s) 13
AsuHPI GGTGA 1 cut(s) 20
AsuII TTCGAA 1 cut(s) 17
BaeGI GKGCMC 2 cut(s) 63, 100
BalI TGGCCA 1 cut(s) 251
BanI GGYRCC 1 cut(s) 89
BbsI GAAGAC 2 cut(s) 16, 65
Bbv12I GWGCWC 1 cut(s) 100
BccI CCATC 1 cut(s) 55
BceAI ACGGC 1 cut(s) 176
BfmI CTRYAG 1 cut(s) 112
BisI GCNGC 1 cut(s) 159
BlsI GCNGC 1 cut(s) 160
BmiI GGNNCC 2 cut(s) 91, 237
BmsI GCATC 1 cut(s) 187
BpiI GAAGAC 2 cut(s) 16, 65
Bpu14I TTCGAA 1 cut(s) 17
Bse1I ACTGG 1 cut(s) 93
BseGI GGATG 1 cut(s) 41
BseNI ACTGG 1 cut(s) 93
BseSI GKGCMC 2 cut(s) 63, 100
BshFI GGCC 2 cut(s) 158, 251
BshNI GGYRCC 1 cut(s) 89
BsiHKAI GWGCWC 1 cut(s) 100
BsnI GGCC 2 cut(s) 158, 251
Bsp119I TTCGAA 1 cut(s) 17
Bsp1286I GDGCHC 2 cut(s) 63, 100
Bsp143I GATC 3 cut(s) 130, 186, 203
BspACI CCGC 2 cut(s) 138, 159
BspANI GGCC 2 cut(s) 158, 251
BspLI GGNNCC 2 cut(s) 91, 237
BspMAI CTGCAG 1 cut(s) 116
BspT104I TTCGAA 1 cut(s) 17
BspT107I GGYRCC 1 cut(s) 89
BsrI ACTGG 1 cut(s) 93
BssMI GATC 3 cut(s) 130, 186, 203
Bst4CI ACNGT 2 cut(s) 35, 183
BstBI TTCGAA 1 cut(s) 17
BstC8I GCNNGC 1 cut(s) 151
BstF5I GGATG 1 cut(s) 41
BstKTI GATC 3 cut(s) 133, 189, 206
BstMBI GATC 3 cut(s) 130, 186, 203
BstMWI GCNNNNNNNGC 3 cut(s) 146, 155, 197
BstSFI CTRYAG 1 cut(s) 112
BstSLI GKGCMC 2 cut(s) 63, 100
BstV2I GAAGAC 2 cut(s) 16, 65
BsuRI GGCC 2 cut(s) 158, 251
BtsCI GGATG 1 cut(s) 41
BtsIMutI CAGTG 1 cut(s) 100
Cac8I GCNNGC 1 cut(s) 151
CseI GACGC 1 cut(s) 155
CviAII CATG 1 cut(s) 211
CviJI RGCY 3 cut(s) 22, 158, 251
CviKI_1 RGCY 3 cut(s) 22, 158, 251
DpnI GATC 3 cut(s) 132, 188, 205
DpnII GATC 3 cut(s) 130, 186, 203
EaeI YGGCCR 2 cut(s) 156, 249
FaeI CATG 1 cut(s) 214
FaiI YATR 2 cut(s) 65, 212
FalI AAGNNNNNCTT 1 cut(s) 30
FatI CATG 1 cut(s) 210
FblI GTMKAC 1 cut(s) 216
Fnu4HI GCNGC 1 cut(s) 159
FokI GGATG 1 cut(s) 28
Fsp4HI GCNGC 1 cut(s) 159
GluI GCNGC 1 cut(s) 159
HaeIII GGCC 2 cut(s) 158, 251
HgaI GACGC 1 cut(s) 155
Hin1II CATG 1 cut(s) 214
HincII GTYRAC 1 cut(s) 217
HindII GTYRAC 1 cut(s) 217
HindIII AAGCTT 1 cut(s) 20
HinfI GANTC 2 cut(s) 70, 104
HphI GGTGA 1 cut(s) 20
Hpy166II GTNNAC 2 cut(s) 98, 217
Hpy188III TCNNGA 1 cut(s) 261
Hpy8I GTNNAC 2 cut(s) 98, 217
HpyAV CCTTC 1 cut(s) 24
HpyCH4III ACNGT 2 cut(s) 35, 183
HpyCH4V TGCA 2 cut(s) 98, 114
HpyF10VI GCNNNNNNNGC 3 cut(s) 146, 155, 197
Hsp92II CATG 1 cut(s) 214
Kzo9I GATC 3 cut(s) 130, 186, 203
LpnPI CCDG 4 cut(s) 106, 124, 214, 233
LweI GCATC 1 cut(s) 187
MaeIII GTNAC 2 cut(s) 26, 143
MalI GATC 3 cut(s) 132, 188, 205
MboI GATC 3 cut(s) 130, 186, 203
MboII GAAGA 4 cut(s) 18, 21, 65, 99
MhlI GDGCHC 2 cut(s) 63, 100
MlsI TGGCCA 1 cut(s) 251
MluCI AATT 1 cut(s) 271
MluNI TGGCCA 1 cut(s) 251
MlyI GAGTC 1 cut(s) 79
Mox20I TGGCCA 1 cut(s) 251
MroXI GAANNNNTTC 1 cut(s) 13
MscI TGGCCA 1 cut(s) 251
Msp20I TGGCCA 1 cut(s) 251
MwoI GCNNNNNNNGC 3 cut(s) 146, 155, 197
NdeII GATC 3 cut(s) 130, 186, 203
NlaIII CATG 1 cut(s) 214
NlaIV GGNNCC 2 cut(s) 91, 237
NmuCI GTSAC 2 cut(s) 26, 143
NspV TTCGAA 1 cut(s) 17
PdmI GAANNNNTTC 1 cut(s) 13
PfeI GAWTC 1 cut(s) 104
PkrI GCNGC 1 cut(s) 160
PleI GAGTC 1 cut(s) 78
PpsI GAGTC 1 cut(s) 78
PspN4I GGNNCC 2 cut(s) 91, 237
PstI CTGCAG 1 cut(s) 116
SalI GTCGAC 1 cut(s) 215
SatI GCNGC 1 cut(s) 159
Sau3AI GATC 3 cut(s) 130, 186, 203
SchI GAGTC 1 cut(s) 79
SduI GDGCHC 2 cut(s) 63, 100
SetI ASST 4 cut(s) 16, 24, 126, 174
SfaNI GCATC 1 cut(s) 187
SfcI CTRYAG 1 cut(s) 112
SfuI TTCGAA 1 cut(s) 17
Sse9I AATT 1 cut(s) 271
SsiI CCGC 2 cut(s) 138, 159
TaaI ACNGT 2 cut(s) 35, 183
TaqI TCGA 3 cut(s) 17, 102, 216
TasI AATT 1 cut(s) 271
TauI GCSGC 1 cut(s) 161
TfiI GAWTC 1 cut(s) 104
TscAI CASTG 1 cut(s) 100
TseFI GTSAC 2 cut(s) 26, 143
Tsp45I GTSAC 2 cut(s) 26, 143
TspRI CASTG 1 cut(s) 100
VneI GTGCAC 1 cut(s) 96
XapI RAATTY 1 cut(s) 271
XcmI CCANNNNNNNNNTGG 1 cut(s) 208
XmiI GTMKAC 1 cut(s) 216
XmnI GAANNNNTTC 1 cut(s) 13
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.