Rh2BG276900

UDP-glucuronate 4-epimerase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Forward (+)
30200996 .. 30201145
150 bp
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UTR
Exon/CDS
Intron
Rh2BG276900.1

Sequence Viewer

Length: 150 bp
ATGCACCTGGCCTCTCAGGCCGGAGTCCGATACATCATGGAGAACCACAGCAACATCGCCAACCTCATTACTCTTCTCGAGGCATGTAAATCGGCCAATCCTCCACCGTCGATTGTGTGGGCCTCGCCGGCTTTGTTTGTCGCTGTGTAG

Protein Analysis

49

Amino Acids

5.25

Weight (kDa)

6.69

Isoelectric Point (pI)

61.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0031208)

Species Orthologous Gene IDs
rosa_multiflora Rmu_sc0002360.1_g000016
rosa_samantha Rh2BG276900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 93
AjnI CCWGG 1 cut(s) 6
Ama87I CYCGRG 1 cut(s) 77
AoxI GGCC 4 cut(s) 9, 18, 93, 120
AspS9I GGNCC 1 cut(s) 120
AvaI CYCGRG 1 cut(s) 77
BcgI CGANNNNNNTGC 2 cut(s) 72, 106
BciT130I CCWGG 1 cut(s) 8
BglI GCCNNNNNGGC 2 cut(s) 17, 128
Bme1390I CCNGG 1 cut(s) 8
BmeT110I CYCGRG 1 cut(s) 77
BmgT120I GGNCC 1 cut(s) 120
BmrFI CCNGG 1 cut(s) 8
Bse118I RCCGGY 1 cut(s) 127
BseBI CCWGG 1 cut(s) 8
BseMII CTCAG 1 cut(s) 29
BshFI GGCC 4 cut(s) 11, 20, 95, 122
BsiHKCI CYCGRG 1 cut(s) 77
BsiSI CCGG 2 cut(s) 21, 128
BsnI GGCC 4 cut(s) 11, 20, 95, 122
BsoBI CYCGRG 1 cut(s) 77
BspANI GGCC 4 cut(s) 11, 20, 95, 122
BspCNI CTCAG 1 cut(s) 28
BsrFI RCCGGY 1 cut(s) 127
BssAI RCCGGY 1 cut(s) 127
Bst2UI CCWGG 1 cut(s) 8
Bst4CI ACNGT 1 cut(s) 108
Bst6I CTCTTC 1 cut(s) 78
BstC8I GCNNGC 1 cut(s) 129
BstDEI CTNAG 1 cut(s) 15
BstMWI GCNNNNNNNGC 2 cut(s) 17, 128
BstNI CCWGG 1 cut(s) 8
BstNSI RCATGY 1 cut(s) 87
BstSCI CCNGG 1 cut(s) 6
BsuRI GGCC 4 cut(s) 11, 20, 95, 122
BtgZI GCGATG 1 cut(s) 40
Cac8I GCNNGC 1 cut(s) 129
Cfr10I RCCGGY 1 cut(s) 127
Cfr13I GGNCC 1 cut(s) 120
CviAII CATG 2 cut(s) 37, 84
CviJI RGCY 5 cut(s) 11, 20, 95, 122, 131
CviKI_1 RGCY 5 cut(s) 11, 20, 95, 122, 131
DdeI CTNAG 1 cut(s) 15
EaeI YGGCCR 1 cut(s) 93
Eam1104I CTCTTC 1 cut(s) 78
EarI CTCTTC 1 cut(s) 78
Eco88I CYCGRG 1 cut(s) 77
EcoRII CCWGG 1 cut(s) 6
FaeI CATG 2 cut(s) 40, 87
FaiI YATR 2 cut(s) 38, 85
FatI CATG 2 cut(s) 36, 83
HaeIII GGCC 4 cut(s) 11, 20, 95, 122
HapII CCGG 2 cut(s) 21, 128
Hin1II CATG 2 cut(s) 40, 87
HinfI GANTC 1 cut(s) 24
HpaII CCGG 2 cut(s) 21, 128
Hpy188I TCNGA 1 cut(s) 29
Hpy188III TCNNGA 1 cut(s) 77
Hpy99I CGWCG 1 cut(s) 112
HpyCH4III ACNGT 1 cut(s) 108
HpyCH4V TGCA 1 cut(s) 4
HpyF10VI GCNNNNNNNGC 2 cut(s) 17, 128
HpyF3I CTNAG 1 cut(s) 15
Hsp92II CATG 2 cut(s) 40, 87
KroI GCCGGC 1 cut(s) 127
KroNI GCCGGC 1 cut(s) 129
LpnPI CCDG 4 cut(s) 2, 20, 34, 141
MboII GAAGA 1 cut(s) 65
MlyI GAGTC 1 cut(s) 33
MnlI CCTC 5 cut(s) 22, 73, 74, 111, 133
MroNI GCCGGC 1 cut(s) 127
MspI CCGG 2 cut(s) 21, 128
MspR9I CCNGG 1 cut(s) 8
MvaI CCWGG 1 cut(s) 8
MwoI GCNNNNNNNGC 2 cut(s) 17, 128
NaeI GCCGGC 1 cut(s) 129
NgoMIV GCCGGC 1 cut(s) 127
NlaIII CATG 2 cut(s) 40, 87
NspI RCATGY 1 cut(s) 87
PaeR7I CTCGAG 1 cut(s) 77
PdiI GCCGGC 1 cut(s) 129
PleI GAGTC 1 cut(s) 32
PpsI GAGTC 1 cut(s) 32
Psp6I CCWGG 1 cut(s) 6
PspGI CCWGG 1 cut(s) 6
PspPI GGNCC 1 cut(s) 120
Sau96I GGNCC 1 cut(s) 120
SchI GAGTC 1 cut(s) 33
ScrFI CCNGG 1 cut(s) 8
SetI ASST 2 cut(s) 9, 66
SfiI GGCCNNNNNGGCC 1 cut(s) 17
Sfr274I CTCGAG 1 cut(s) 77
SlaI CTCGAG 1 cut(s) 77
SmlI CTYRAG 1 cut(s) 77
SmoI CTYRAG 1 cut(s) 77
StyD4I CCNGG 1 cut(s) 6
TaaI ACNGT 1 cut(s) 108
TaqI TCGA 2 cut(s) 78, 110
XceI RCATGY 1 cut(s) 87
XhoI CTCGAG 1 cut(s) 77
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.