Rh2BG401200
HSP70 Family

Belongs to the heat shock protein 70 family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Reverse (-)
56934269 .. 56937590
3322 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG401200.1

Sequence Viewer

Length: 1290 bp
ATGAGTGTGGTGGGATTTGATTTTGGCAATGAGAGTGGCATTGTGGCCGTGGTAAGGCACAACGGTATCGATGTTGTGCTCAATGATGAGTCCAAACACGAAACTCCTGCCATTGTTTGTTTCGGGGATAAGCAGCGGTTCATTGGGACCGCCGGCGCTGCTTCATCTATGATGAACCCTAAGAACACGATTTCGCAGATCAAACGCTTGGTTGGAAAGAAATTCTCGGATCCTGTGTTGCAGAGGGATATCAAGTCCCTGCCTTTTGCTGTTACTGAAGGGCCTGATGGATATCCATTGATCCATGCCCGTTATTTGGGAGAAGCCAAGACATTCACGCCCACCCAAGTTTTGGGAATGGTGTTCTCTGATCTGAAAATCATAGCCCAGAAGAATCTTAATGCAGCAGTTGTAGACTGCTGTATAGGAATTCCGGTTTATTTCACTGATCTCCAAAGAAGAGCTGTTGAGGATGCAGCCAGAATTGCTGGGTTGAACCCTCTTAGGTTGTTTCATGAAACTACAGCAACTGCTTTAGCTTATGGAATCTACAAGACAGATTTACCAGAGAACGACCAATTGAATGTTGCCTTTGTTGATATTGGGCATGCTAGCATGCAAGTTTGCATTGCTGGCTTCAAGAAGGGGCAGCTGAAAGTTCTTGCTCATTCATTTGACCTGTCTTTGGGTGGTAGGGATTTTGATGAAGTACTGTTCCAGCACTTTGCTGCAAAATTTAAGGAAGAGTACAAGATAGATGTTTACCAGAATGCAAGGGCCTGCCTTCGGCTTCGGGCTGCTTGTGAGAAGCTGAAGAAGGTGCTTAGTGCAAATCCTGAGGCACCTTTGAATATTGAGTGCTTAATGGACGAGAAAGATGTTAGAGGTTTTATTAAGCGGGATGAATTTGAACAAATTAGTGCTCCTATTTTGGAACGCGTAAAGGTACCTCTGGAGGAGGCCCTTCTCGATGCAAATCTTTCAATAGAGAACGTTCATACTGTTGAGGTTGTTGGTTCAGGCTTTCGTGTACCTGCTATAATCAAGATATTGATAGAGTTCTTCAAAAAGGAGCCTAGGAGAACTATGAATGCTAGTGAGTGTGTTGCCAGGGGTTGTGCTCTGCAGTGTGCAATGCTTAGTCCTACATTCAAAGTCCGAGAGTTTCAGGTAAAATATTCAGACTCCTATTCTGTTTCTTTGGTTGAATTTCTGTATTGCAGAAGTGACAAGCTGCTTTACTCACAATTATCCTTGTTTGTACTTATTTCTTATTTAATCTGCAGGTGA

Protein Analysis

429

Amino Acids

47.79

Weight (kDa)

7.5

Isoelectric Point (pI)

33.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSP70 PF00012 3 - 392 1.2e-130 Hsp70 protein
MreB_Mbl PF06723 136 - 374 9.5e-06 MreB/Mbl protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0029366)

Species Orthologous Gene IDs
pyrus_communis pycom09g13000
rosa_samantha Rh2BG401200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1275
Acc36I ACCTGC 2 cut(s) 1042, 1275
Acc65I GGTACC 1 cut(s) 946
AccB1I GGYRCC 2 cut(s) 841, 946
AccB7I CCANNNNNTGG 1 cut(s) 352
AccI GTMKAC 1 cut(s) 414
AccII CGCG 1 cut(s) 939
AciI CCGC 3 cut(s) 136, 150, 898
AclI AACGTT 1 cut(s) 993
AclWI GGATC 3 cut(s) 224, 237, 295
AcoI YGGCCR 1 cut(s) 45
AcsI RAATTY 5 cut(s) 221, 429, 734, 905, 1208
AcuI CTGAAG 2 cut(s) 297, 833
AfaI GTAC 5 cut(s) 711, 749, 948, 1032, 1263
AfiI CCNNNNNNNGG 5 cut(s) 54, 316, 352, 685, 786
AflIII ACRYGT 1 cut(s) 937
AgsI TTSAA 9 cut(s) 496, 583, 640, 850, 911, 984, 1066, 1153, 1208
AjnI CCWGG 1 cut(s) 1109
AluBI AGCT 5 cut(s) 464, 539, 652, 811, 1234
AluI AGCT 5 cut(s) 464, 539, 652, 811, 1234
Alw21I GWGCWC 3 cut(s) 81, 925, 1123
AlwI GGATC 3 cut(s) 224, 237, 295
AlwNI CAGNNNCTG 1 cut(s) 530
AoxI GGCC 4 cut(s) 45, 281, 777, 960
ApeKI GCWGC 8 cut(s) 133, 158, 404, 476, 649, 728, 797, 1234
ApoI RAATTY 5 cut(s) 221, 429, 734, 905, 1208
Asp718I GGTACC 1 cut(s) 946
AspA2I CCTAGG 1 cut(s) 1076
AspLEI GCGC 1 cut(s) 158
AspS9I GGNCC 4 cut(s) 147, 281, 777, 961
AsuNHI GCTAGC 1 cut(s) 611
AvaII GGWCC 1 cut(s) 147
AvrII CCTAGG 1 cut(s) 1076
AxyI CCTNAGG 1 cut(s) 837
BaeI ACNNNNGTAYC 2 cut(s) 49, 82
BamHI GGATCC 1 cut(s) 229
BanI GGYRCC 2 cut(s) 841, 946
Bbv12I GWGCWC 3 cut(s) 81, 925, 1123
BbvI GCAGC 8 cut(s) 145, 145, 416, 488, 661, 715, 784, 1221
BccI CCATC 1 cut(s) 281
BceAI ACGGC 1 cut(s) 32
BcgI CGANNNNNNTGC 2 cut(s) 89, 123
BciT130I CCWGG 1 cut(s) 1111
BfaI CTAG 3 cut(s) 612, 1077, 1095
BfmI CTRYAG 3 cut(s) 522, 1124, 1282
BfoI RGCGCY 1 cut(s) 159
BfuAI ACCTGC 2 cut(s) 1042, 1275
BisI GCNGC 8 cut(s) 134, 159, 405, 477, 650, 729, 798, 1235
BlnI CCTAGG 1 cut(s) 1076
BlsI GCNGC 8 cut(s) 135, 160, 406, 478, 651, 730, 799, 1236
BmcAI AGTACT 1 cut(s) 711
Bme1390I CCNGG 1 cut(s) 1111
Bme18I GGWCC 1 cut(s) 147
BmgT120I GGNCC 4 cut(s) 147, 281, 777, 961
BmiI GGNNCC 5 cut(s) 148, 231, 843, 948, 1074
BmrFI CCNGG 1 cut(s) 1111
BmsI GCATC 2 cut(s) 463, 961
BmtI GCTAGC 1 cut(s) 615
BpmI CTGGAG 1 cut(s) 974
Bsa29I ATCGAT 1 cut(s) 69
BsaBI GATNNNNATC 2 cut(s) 291, 975
BsaJI CCNNGG 3 cut(s) 48, 1076, 1110
BsaWI WCCGGW 1 cut(s) 433
Bsc4I CCNNNNNNNGG 5 cut(s) 54, 316, 352, 685, 786
Bse118I RCCGGY 1 cut(s) 152
Bse21I CCTNAGG 1 cut(s) 837
Bse3DI GCAATG 3 cut(s) 34, 627, 1140
Bse8I GATNNNNATC 2 cut(s) 291, 975
BseBI CCWGG 1 cut(s) 1111
BseCI ATCGAT 1 cut(s) 69
BseDI CCNNGG 3 cut(s) 48, 1076, 1110
BseGI GGATG 2 cut(s) 478, 907
BseJI GATNNNNATC 2 cut(s) 291, 975
BseLI CCNNNNNNNGG 5 cut(s) 54, 316, 352, 685, 786
BseMI GCAATG 3 cut(s) 34, 627, 1140
BseMII CTCAG 1 cut(s) 828
BseRI GAGGAG 1 cut(s) 971
BseXI GCAGC 8 cut(s) 145, 145, 416, 488, 661, 715, 784, 1221
BseYI CCCAGC 1 cut(s) 488
Bsh1236I CGCG 1 cut(s) 939
BshFI GGCC 4 cut(s) 47, 283, 779, 962
BshNI GGYRCC 2 cut(s) 841, 946
BshVI ATCGAT 1 cut(s) 69
BsiHKAI GWGCWC 3 cut(s) 81, 925, 1123
BsiSI CCGG 2 cut(s) 153, 434
BslFI GGGAC 2 cut(s) 160, 241
BslI CCNNNNNNNGG 5 cut(s) 54, 316, 352, 685, 786
BsmFI GGGAC 2 cut(s) 160, 241
BsmI GAATGC 2 cut(s) 775, 1096
BsnI GGCC 4 cut(s) 47, 283, 779, 962
Bsp1286I GDGCHC 3 cut(s) 81, 925, 1123
Bsp143I GATC 5 cut(s) 198, 229, 300, 370, 448
BspACI CCGC 3 cut(s) 136, 150, 898
BspANI GGCC 4 cut(s) 47, 283, 779, 962
BspCNI CTCAG 1 cut(s) 829
BspDI ATCGAT 1 cut(s) 69
BspFNI CGCG 1 cut(s) 939
BspHI TCATGA 1 cut(s) 514
BspLI GGNNCC 5 cut(s) 148, 231, 843, 948, 1074
BspMAI CTGCAG 2 cut(s) 1128, 1286
BspMI ACCTGC 2 cut(s) 1042, 1275
BspOI GCTAGC 1 cut(s) 615
BspPI GGATC 3 cut(s) 224, 237, 295
BspQI GCTCTTC 1 cut(s) 454
BspT107I GGYRCC 2 cut(s) 841, 946
BsrDI GCAATG 3 cut(s) 34, 627, 1140
BsrFI RCCGGY 1 cut(s) 152
BssAI RCCGGY 1 cut(s) 152
BssECI CCNNGG 3 cut(s) 48, 1076, 1110
BssMI GATC 5 cut(s) 198, 229, 300, 370, 448
BssT1I CCWWGG 1 cut(s) 1076
Bst2UI CCWGG 1 cut(s) 1111
Bst4CI ACNGT 3 cut(s) 65, 714, 1003
Bst6I CTCTTC 2 cut(s) 454, 738
BstC8I GCNNGC 6 cut(s) 154, 609, 613, 617, 634, 781
BstDEI CTNAG 5 cut(s) 180, 503, 824, 837, 1139
BstDSI CCRYGG 1 cut(s) 48
BstF5I GGATG 2 cut(s) 478, 907
BstFNI CGCG 1 cut(s) 939
BstH2I RGCGCY 1 cut(s) 159
BstHHI GCGC 1 cut(s) 158
BstKTI GATC 5 cut(s) 201, 232, 303, 373, 451
BstMBI GATC 5 cut(s) 198, 229, 300, 370, 448
BstMWI GCNNNNNNNGC 3 cut(s) 158, 485, 633
BstNI CCWGG 1 cut(s) 1111
BstNSI RCATGY 2 cut(s) 611, 619
BstSCI CCNGG 1 cut(s) 1109
BstSFI CTRYAG 3 cut(s) 522, 1124, 1282
BstUI CGCG 1 cut(s) 939
BstV1I GCAGC 8 cut(s) 145, 145, 416, 488, 661, 715, 784, 1221
BstX2I RGATCY 1 cut(s) 229
BstYI RGATCY 1 cut(s) 229
Bsu15I ATCGAT 1 cut(s) 69
Bsu36I CCTNAGG 1 cut(s) 837
BsuRI GGCC 4 cut(s) 47, 283, 779, 962
BsuTUI ATCGAT 1 cut(s) 69
BtgI CCRYGG 1 cut(s) 48
BtsCI GGATG 2 cut(s) 478, 907
BtsI GCAGTG 1 cut(s) 1133
BtsIMutI CAGTG 2 cut(s) 444, 1133
BveI ACCTGC 2 cut(s) 1042, 1275
Cac8I GCNNGC 6 cut(s) 154, 609, 613, 617, 634, 781
CaiI CAGNNNCTG 1 cut(s) 530
CciI TCATGA 1 cut(s) 514
CfoI GCGC 1 cut(s) 158
Cfr10I RCCGGY 1 cut(s) 152
Cfr13I GGNCC 4 cut(s) 147, 281, 777, 961
ClaI ATCGAT 1 cut(s) 69
Csp6I GTAC 5 cut(s) 710, 748, 947, 1031, 1262
CspCI CAANNNNNGTGG 2 cut(s) 16, 51
CviAII CATG 4 cut(s) 305, 515, 608, 616
CviQI GTAC 5 cut(s) 710, 748, 947, 1031, 1262
DdeI CTNAG 5 cut(s) 180, 503, 824, 837, 1139
DpnI GATC 5 cut(s) 200, 231, 302, 372, 450
DpnII GATC 5 cut(s) 198, 229, 300, 370, 448
EaeI YGGCCR 1 cut(s) 45
Eam1104I CTCTTC 2 cut(s) 454, 738
EarI CTCTTC 2 cut(s) 454, 738
Eco130I CCWWGG 1 cut(s) 1076
Eco32I GATATC 2 cut(s) 250, 293
Eco47I GGWCC 1 cut(s) 147
Eco57I CTGAAG 2 cut(s) 297, 833
Eco81I CCTNAGG 1 cut(s) 837
EcoO109I RGGNCCY 3 cut(s) 281, 777, 961
EcoRI GAATTC 1 cut(s) 429
EcoRII CCWGG 1 cut(s) 1109
EcoRV GATATC 2 cut(s) 250, 293
EcoT14I CCWWGG 1 cut(s) 1076
ErhI CCWWGG 1 cut(s) 1076
FaeI CATG 4 cut(s) 308, 518, 611, 619
FaqI GGGAC 2 cut(s) 160, 241
FatI CATG 4 cut(s) 304, 514, 607, 615
FauI CCCGC 1 cut(s) 891
FblI GTMKAC 1 cut(s) 414
Fnu4HI GCNGC 8 cut(s) 134, 159, 405, 477, 650, 729, 798, 1235
FokI GGATG 2 cut(s) 485, 914
Fsp4HI GCNGC 8 cut(s) 134, 159, 405, 477, 650, 729, 798, 1235
FspBI CTAG 3 cut(s) 612, 1077, 1095
GlaI GCGC 1 cut(s) 157
GluI GCNGC 8 cut(s) 134, 159, 405, 477, 650, 729, 798, 1235
GsaI CCCAGC 1 cut(s) 492
GsuI CTGGAG 1 cut(s) 974
HaeII RGCGCY 1 cut(s) 159
HaeIII GGCC 4 cut(s) 47, 283, 779, 962
HapII CCGG 2 cut(s) 153, 434
HhaI GCGC 1 cut(s) 158
Hin1II CATG 4 cut(s) 308, 518, 611, 619
Hin6I GCGC 1 cut(s) 156
HinP1I GCGC 1 cut(s) 156
HinfI GANTC 4 cut(s) 89, 394, 546, 1184
HpaII CCGG 2 cut(s) 153, 434
Hpy166II GTNNAC 3 cut(s) 415, 763, 1031
Hpy188I TCNGA 5 cut(s) 229, 370, 375, 1160, 1183
Hpy188III TCNNGA 6 cut(s) 515, 640, 836, 953, 968, 1045
Hpy8I GTNNAC 3 cut(s) 415, 763, 1031
HpyAV CCTTC 5 cut(s) 272, 637, 794, 811, 974
HpyCH4III ACNGT 3 cut(s) 65, 714, 1003
HpyCH4IV ACGT 1 cut(s) 993
HpyF10VI GCNNNNNNNGC 3 cut(s) 158, 485, 633
HpyF3I CTNAG 5 cut(s) 180, 503, 824, 837, 1139
HpySE526I ACGT 1 cut(s) 993
Hsp92II CATG 4 cut(s) 308, 518, 611, 619
HspAI GCGC 1 cut(s) 156
KpnI GGTACC 1 cut(s) 950
KroI GCCGGC 1 cut(s) 152
KroNI GCCGGC 1 cut(s) 154
Kzo9I GATC 5 cut(s) 198, 229, 300, 370, 448
LguI GCTCTTC 1 cut(s) 454
LmnI GCTCC 2 cut(s) 928, 1072
Lsp1109I GCAGC 8 cut(s) 145, 145, 416, 488, 661, 715, 784, 1221
LweI GCATC 2 cut(s) 463, 961
MaeI CTAG 3 cut(s) 612, 1077, 1095
MaeII ACGT 1 cut(s) 993
MaeIII GTNAC 2 cut(s) 271, 1226
MalI GATC 5 cut(s) 200, 231, 302, 372, 450
MboI GATC 5 cut(s) 198, 229, 300, 370, 448
MboII GAAGA 5 cut(s) 403, 471, 755, 826, 1054
MfeI CAATTG 1 cut(s) 578
MflI RGATCY 1 cut(s) 229
MhlI GDGCHC 3 cut(s) 81, 925, 1123
MluCI AATT 9 cut(s) 221, 429, 483, 578, 734, 905, 915, 1208, 1247
MluI ACGCGT 1 cut(s) 937
MlyI GAGTC 2 cut(s) 98, 1178
MmeI TCCRAC 1 cut(s) 193
MnlI CCTC 9 cut(s) 237, 463, 510, 832, 878, 949, 952, 960, 1000
MreI CGCCGGCG 1 cut(s) 152
MroNI GCCGGC 1 cut(s) 152
MseI TTAA 5 cut(s) 399, 738, 863, 894, 1277
MspA1I CMGCKG 2 cut(s) 136, 652
MspI CCGG 2 cut(s) 153, 434
MspR9I CCNGG 1 cut(s) 1111
MunI CAATTG 1 cut(s) 578
Mva1269I GAATGC 2 cut(s) 775, 1096
MvaI CCWGG 1 cut(s) 1111
MvnI CGCG 1 cut(s) 939
MwoI GCNNNNNNNGC 3 cut(s) 158, 485, 633
NaeI GCCGGC 1 cut(s) 154
NdeII GATC 5 cut(s) 198, 229, 300, 370, 448
NgoMIV GCCGGC 1 cut(s) 152
NheI GCTAGC 1 cut(s) 611
NlaIII CATG 4 cut(s) 308, 518, 611, 619
NlaIV GGNNCC 5 cut(s) 148, 231, 843, 948, 1074
NmuCI GTSAC 1 cut(s) 1226
NspI RCATGY 2 cut(s) 611, 619
PaeI GCATGC 2 cut(s) 611, 619
PagI TCATGA 1 cut(s) 514
PaqCI CACCTGC 1 cut(s) 1275
PciSI GCTCTTC 1 cut(s) 454
PctI GAATGC 2 cut(s) 775, 1096
PdiI GCCGGC 1 cut(s) 154
PfeI GAWTC 2 cut(s) 394, 546
PflMI CCANNNNNTGG 1 cut(s) 352
PkrI GCNGC 8 cut(s) 135, 160, 406, 478, 651, 730, 799, 1236
PleI GAGTC 2 cut(s) 97, 1178
PpsI GAGTC 2 cut(s) 97, 1178
Psp1406I AACGTT 1 cut(s) 993
Psp6I CCWGG 1 cut(s) 1109
PspFI CCCAGC 1 cut(s) 488
PspGI CCWGG 1 cut(s) 1109
PspN4I GGNNCC 5 cut(s) 148, 231, 843, 948, 1074
PspPI GGNCC 4 cut(s) 147, 281, 777, 961
PstI CTGCAG 2 cut(s) 1128, 1286
PstNI CAGNNNCTG 1 cut(s) 530
PsuI RGATCY 1 cut(s) 229
PvuII CAGCTG 1 cut(s) 652
RsaI GTAC 5 cut(s) 711, 749, 948, 1032, 1263
RsaNI GTAC 5 cut(s) 710, 748, 947, 1031, 1262
SapI GCTCTTC 1 cut(s) 454
SaqAI TTAA 5 cut(s) 399, 738, 863, 894, 1277
SatI GCNGC 8 cut(s) 134, 159, 405, 477, 650, 729, 798, 1235
Sau3AI GATC 5 cut(s) 198, 229, 300, 370, 448
Sau96I GGNCC 4 cut(s) 147, 281, 777, 961
ScaI AGTACT 1 cut(s) 711
SchI GAGTC 2 cut(s) 98, 1178
ScrFI CCNGG 1 cut(s) 1111
SduI GDGCHC 3 cut(s) 81, 925, 1123
SfaNI GCATC 2 cut(s) 463, 961
SfcI CTRYAG 3 cut(s) 522, 1124, 1282
SgrAI CRCCGGYG 1 cut(s) 152
SinI GGWCC 1 cut(s) 147
SphI GCATGC 2 cut(s) 611, 619
Sse9I AATT 9 cut(s) 221, 429, 483, 578, 734, 905, 915, 1208, 1247
SsiI CCGC 3 cut(s) 136, 150, 898
SspI AATATT 2 cut(s) 853, 1178
SspMI CTAG 3 cut(s) 612, 1077, 1095
StyD4I CCNGG 1 cut(s) 1109
StyI CCWWGG 1 cut(s) 1076
TaaI ACNGT 3 cut(s) 65, 714, 1003
TaiI ACGT 1 cut(s) 996
TaqI TCGA 2 cut(s) 69, 969
TasI AATT 9 cut(s) 221, 429, 483, 578, 734, 905, 915, 1208, 1247
TatI WGTACW 3 cut(s) 709, 747, 1261
TfiI GAWTC 2 cut(s) 394, 546
Tru1I TTAA 5 cut(s) 399, 738, 863, 894, 1277
Tru9I TTAA 5 cut(s) 399, 738, 863, 894, 1277
TscAI CASTG 2 cut(s) 451, 1133
TseFI GTSAC 1 cut(s) 1226
TseI GCWGC 8 cut(s) 133, 158, 404, 476, 649, 728, 797, 1234
Tsp45I GTSAC 1 cut(s) 1226
TspRI CASTG 2 cut(s) 451, 1133
Van91I CCANNNNNTGG 1 cut(s) 352
VpaK11BI GGWCC 1 cut(s) 147
XapI RAATTY 5 cut(s) 221, 429, 734, 905, 1208
XceI RCATGY 2 cut(s) 611, 619
XcmI CCANNNNNNNNNTGG 1 cut(s) 349
XmaJI CCTAGG 1 cut(s) 1076
XmiI GTMKAC 1 cut(s) 414
XspI CTAG 3 cut(s) 612, 1077, 1095
ZrmI AGTACT 1 cut(s) 711
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.