Rh2BG565800

G-type lectin S-receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0033120
Physical Location & Seq
Reverse (-)
77879742 .. 77880143
402 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG565800.1

Sequence Viewer

Length: 402 bp
ATGGATCCTAAAGTGCCTTCACAGTTTCTTACCTGGAAGGAAAATGTTCCATATTGGAGAAGTGCTATCTATGTTGACTCTGGAGGGAAACCAATTGGTGGAGGTTCAAGTGGAGAATTTTTCAGTAATGATGATGGAACCTTCTTTTACCTTGCTGACAACAATCATGATGAGGAGGATATTTTTACTCATGGTGTCTCCAATAACTCAGTAAAACTGATGATGGTTTTGAAGGCGTCTGGAATGCTACTACGTAATGCAGCTGACAGCTGTGGAAGGAAGACAAGAGAATATGGAGTCCATTATGGGGAGAGCCTCTTCATACATGTGATTATATTGCTCGTTGCAGTCCAAATGGTGCCTGTGATAAATATGAATCTGTCTCACCATGCAAGTGTTTGA

Protein Analysis

133

Amino Acids

14.74

Weight (kDa)

5.79

Isoelectric Point (pI)

36.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0033120)

Species Orthologous Gene IDs
rosa_samantha Rh2BG565800 Rh2DG574500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 358
AccB7I CCANNNNNTGG 1 cut(s) 98
AclWI GGATC 1 cut(s) 12
AcsI RAATTY 1 cut(s) 116
AcyI GRCGYC 1 cut(s) 236
AfiI CCNNNNNNNGG 2 cut(s) 98, 307
AflIII ACRYGT 1 cut(s) 325
AgsI TTSAA 2 cut(s) 108, 232
AjnI CCWGG 1 cut(s) 32
AluBI AGCT 2 cut(s) 263, 270
AluI AGCT 2 cut(s) 263, 270
Alw26I GTCTC 2 cut(s) 202, 387
AlwI GGATC 1 cut(s) 12
ApeKI GCWGC 1 cut(s) 260
ApoI RAATTY 1 cut(s) 116
Asp700I GAANNNNTTC 1 cut(s) 45
AsuHPI GGTGA 1 cut(s) 377
BamHI GGATCC 1 cut(s) 4
BanI GGYRCC 1 cut(s) 358
BbsI GAAGAC 1 cut(s) 287
BbvI GCAGC 1 cut(s) 272
BccI CCATC 2 cut(s) 128, 217
BciT130I CCWGG 1 cut(s) 34
BcoDI GTCTC 2 cut(s) 202, 387
BisI GCNGC 1 cut(s) 261
BlsI GCNGC 1 cut(s) 262
Bme1390I CCNGG 1 cut(s) 34
BmiI GGNNCC 3 cut(s) 6, 139, 360
BmrFI CCNGG 1 cut(s) 34
BpiI GAAGAC 1 cut(s) 287
BpmI CTGGAG 1 cut(s) 102
BsaAI YACGTR 1 cut(s) 254
BsaHI GRCGYC 1 cut(s) 236
Bsc4I CCNNNNNNNGG 2 cut(s) 98, 307
BseBI CCWGG 1 cut(s) 34
BseLI CCNNNNNNNGG 2 cut(s) 98, 307
BseMII CTCAG 1 cut(s) 222
BseRI GAGGAG 1 cut(s) 188
BseXI GCAGC 1 cut(s) 272
BshNI GGYRCC 1 cut(s) 358
BslI CCNNNNNNNGG 2 cut(s) 98, 307
BsmAI GTCTC 2 cut(s) 202, 387
BsmI GAATGC 1 cut(s) 249
Bsp143I GATC 1 cut(s) 4
BspCNI CTCAG 1 cut(s) 221
BspHI TCATGA 1 cut(s) 166
BspLI GGNNCC 3 cut(s) 6, 139, 360
BspPI GGATC 1 cut(s) 12
BspT107I GGYRCC 1 cut(s) 358
BssMI GATC 1 cut(s) 4
BssNI GRCGYC 1 cut(s) 236
Bst2UI CCWGG 1 cut(s) 34
Bst4CI ACNGT 1 cut(s) 24
Bst6I CTCTTC 1 cut(s) 323
BstACI GRCGYC 1 cut(s) 236
BstBAI YACGTR 1 cut(s) 254
BstDEI CTNAG 1 cut(s) 208
BstKTI GATC 1 cut(s) 7
BstMAI GTCTC 2 cut(s) 202, 387
BstMBI GATC 1 cut(s) 4
BstNI CCWGG 1 cut(s) 34
BstNSI RCATGY 1 cut(s) 329
BstSCI CCNGG 1 cut(s) 32
BstSNI TACGTA 1 cut(s) 254
BstV1I GCAGC 1 cut(s) 272
BstV2I GAAGAC 1 cut(s) 287
BstX2I RGATCY 1 cut(s) 4
BstYI RGATCY 1 cut(s) 4
CciI TCATGA 1 cut(s) 166
CseI GACGC 1 cut(s) 225
CviAII CATG 4 cut(s) 167, 191, 326, 389
CviJI RGCY 3 cut(s) 263, 270, 315
CviKI_1 RGCY 3 cut(s) 263, 270, 315
DdeI CTNAG 1 cut(s) 208
DpnI GATC 1 cut(s) 6
DpnII GATC 1 cut(s) 4
Eam1104I CTCTTC 1 cut(s) 323
EarI CTCTTC 1 cut(s) 323
Eco105I TACGTA 1 cut(s) 254
EcoRII CCWGG 1 cut(s) 32
FaeI CATG 4 cut(s) 170, 194, 329, 392
FatI CATG 4 cut(s) 166, 190, 325, 388
Fnu4HI GCNGC 1 cut(s) 261
Fsp4HI GCNGC 1 cut(s) 261
GluI GCNGC 1 cut(s) 261
GsuI CTGGAG 1 cut(s) 102
HgaI GACGC 1 cut(s) 225
Hin1I GRCGYC 1 cut(s) 236
Hin1II CATG 4 cut(s) 170, 194, 329, 392
HincII GTYRAC 1 cut(s) 76
HindII GTYRAC 1 cut(s) 76
HinfI GANTC 3 cut(s) 77, 297, 376
HphI GGTGA 1 cut(s) 377
Hpy166II GTNNAC 1 cut(s) 76
Hpy188III TCNNGA 3 cut(s) 81, 167, 240
Hpy8I GTNNAC 1 cut(s) 76
HpyAV CCTTC 5 cut(s) 27, 31, 151, 226, 270
HpyCH4III ACNGT 1 cut(s) 24
HpyCH4IV ACGT 1 cut(s) 253
HpyCH4V TGCA 3 cut(s) 260, 347, 392
HpyF3I CTNAG 1 cut(s) 208
HpySE526I ACGT 1 cut(s) 253
Hsp92I GRCGYC 1 cut(s) 236
Hsp92II CATG 4 cut(s) 170, 194, 329, 392
Kzo9I GATC 1 cut(s) 4
LpnPI CCDG 5 cut(s) 19, 46, 66, 225, 375
Lsp1109I GCAGC 1 cut(s) 272
MaeII ACGT 1 cut(s) 253
MalI GATC 1 cut(s) 6
MboI GATC 1 cut(s) 4
MboII GAAGA 2 cut(s) 292, 310
MfeI CAATTG 1 cut(s) 93
MflI RGATCY 1 cut(s) 4
MluCI AATT 2 cut(s) 93, 116
MlyI GAGTC 2 cut(s) 71, 306
MnlI CCTC 5 cut(s) 77, 95, 166, 169, 326
MroXI GAANNNNTTC 1 cut(s) 45
MslI CAYNNNNRTG 2 cut(s) 326, 393
MspA1I CMGCKG 2 cut(s) 263, 270
MspR9I CCNGG 1 cut(s) 34
MunI CAATTG 1 cut(s) 93
Mva1269I GAATGC 1 cut(s) 249
MvaI CCWGG 1 cut(s) 34
NdeII GATC 1 cut(s) 4
NlaIII CATG 4 cut(s) 170, 194, 329, 392
NlaIV GGNNCC 3 cut(s) 6, 139, 360
NspI RCATGY 1 cut(s) 329
PagI TCATGA 1 cut(s) 166
PciI ACATGT 1 cut(s) 325
PctI GAATGC 1 cut(s) 249
PdmI GAANNNNTTC 1 cut(s) 45
PfeI GAWTC 1 cut(s) 376
PflMI CCANNNNNTGG 1 cut(s) 98
PkrI GCNGC 1 cut(s) 262
PleI GAGTC 2 cut(s) 71, 305
PpsI GAGTC 2 cut(s) 71, 305
Ppu21I YACGTR 1 cut(s) 254
PscI ACATGT 1 cut(s) 325
Psp6I CCWGG 1 cut(s) 32
PspGI CCWGG 1 cut(s) 32
PspN4I GGNNCC 3 cut(s) 6, 139, 360
PsuI RGATCY 1 cut(s) 4
PvuII CAGCTG 2 cut(s) 263, 270
RseI CAYNNNNRTG 2 cut(s) 326, 393
SatI GCNGC 1 cut(s) 261
Sau3AI GATC 1 cut(s) 4
SchI GAGTC 2 cut(s) 71, 306
ScrFI CCNGG 1 cut(s) 34
SetI ASST 7 cut(s) 35, 106, 143, 153, 256, 265, 272
SmiMI CAYNNNNRTG 2 cut(s) 326, 393
SnaBI TACGTA 1 cut(s) 254
Sse9I AATT 2 cut(s) 93, 116
StyD4I CCNGG 1 cut(s) 32
TaaI ACNGT 1 cut(s) 24
TaiI ACGT 1 cut(s) 256
TasI AATT 2 cut(s) 93, 116
TfiI GAWTC 1 cut(s) 376
TseI GCWGC 1 cut(s) 260
TspDTI ATGAA 2 cut(s) 310, 389
Van91I CCANNNNNTGG 1 cut(s) 98
XapI RAATTY 1 cut(s) 116
XceI RCATGY 1 cut(s) 329
XmnI GAANNNNTTC 1 cut(s) 45
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.