Rh2BG587100

Cell morphogenesis N-terminal

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Forward (+)
80375915 .. 80385528
9614 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG587100.1

Sequence Viewer

Length: 5946 bp
ATGGAACTCAGTATTCGTCGTATCGACACTAGTGTTGCCCGGAGTGAAACACTTAGTATCATCAATGGAATGCGCTACTTAAAGTTAGGGGTTAAAACTGAGGGTGGACTGAATGCATCTGCCTCCTTTGTGGCAAAAGCAAATCCCCTTAATCGTGCACCCCATAAACGCAAAAGTGAGCTTCATCATGCTCTGTGTAATATGCTTTCAAATATCCTAGCACCTTTGGCAGAAGGTGGAAAAAACCAGTGGCCACCTTCAGGTGTAGAGCCTGCACTTACACTCTGGTTTGAAGCTGTTGGGCGCATAAGAGGACAACTCATGCATTGGATGGATAAACAGAGCAAACATATTTCTGTTGGATATCCTCTTGTGACTCTTCTACTATGTCTTGGCGACCCGCAAATTTTTCACAACAATTTAAGCTCTCACATGGAACAACTATACAAGCTTCTTAGAGACAAGACCCATCGTTACATGGCATTGGACTGTCTTCACCGAGTTTTGAGGTTTTACCTCAGTGTTCATGCAGCAAATCAGGCTCCTAATCGTATATGGGACTGCTTAGACAGTATAACTTCACAGCTCTTAACGGTTTTGAGGAAAGGAATGCTTACTCAGGATGTCCAACATGATAAACTTGTGGAGTTTTGTGTGACTATAGCAGATCATAACCTTGATTTTGCAATGAATCATATGATACTGGAATTGCTGAAGCAAGACAGTCCTAGTGAAGCGAAGGTTATTGGTCTTCGTGCTTTGCTTGCCATTGTCATGTCACCTTCAAGCCCGCATGTTGGTCTGGAAATATTCAAAGGTCATGATATTGGCCACTATATTCCCAAAGTGAAGAACGCAATTGAGTCCATCTTGAGGTCTTGTCATCGAATCTATAGTCAGGCTCTTCTCACATCTCCAAAGACTACCATAGATTCTATAACCAAGGAAAAGTCTCAAGGATATCTCTTCCGGTCTGTGCTAAAATGTATACCATATCTAATAGAAGAAGTTGGACGCAGTGACAAAATTACTGAGATAATACCTCAACATGGGATAAGCATCGATCCTGGTGTTCGTGAGGAAGCAGTGCAGGTATTGAACCGGATTGTCAGATACCTTCCCCACCGTCGCTTTGCAGTGGCAAGAGGGATGGCGAACTTCATCCTACGACTTCCTGATGAATTCCCTCTTCTCATTCAAACATCACTCGGTCGTCTATTGGAACTCATGCGTTTCTGGAGAGCGTGTCTGATTGATGATAGGCTGGAATGTGATGCTGAAGATGCAGAACAGGTGATGCGGGAAAATTTAGGAATTAGGAAACCTACTTTCCGTCTATCTGGAGACTTAAATGAATTCCGTGCGTCAGAGATAGATGCAGTTGGACTTATCTTCCTTAGTTCTGTGGATAGCCAAATTAGACATACTGCACTTGAATTATTGCGGTGTGTTCGTGCTCTAAGGAATGATATAAGATACCTCACTTTATGTGCACAACCCGATCACCGTCTTAAATATGAAGCTGAACCAATTTTTATAATCGATGTCTTGGAGGAGCATGGGGATGACATCGTCCAGAGCTGCTATTGGGATTCTGGGCGCCCATTTGATTTGAGACGAGAATCTGACTCAATTCCTCCTGATGTGACACTTCAATCTATAATATTTGAGAGCCCTGATAAAAACAGGTGGGCTCGGTGTCTTAGCGAGCTTGTCAAATATGCTGCTGAACTTTGCCCAAGATCTGTCCATGAAGCGAAGGCAGAGGTTATGCAACGTCTGGCTCATATAACACCTGTTGAGTTGGGTGGGAAGGCTCATCAGTCACAAGATACAGACAGCAAATTGGATCAGTGGCTCATGTATGCAATGTTTGTATGTTCATGTCCACCAATTGGTAGAGAAGCTGGTAGTATAGCTGCCACCAAGGATCTTTACCATCTAATTTTCCCATCTCTGAAATCAGGATCTGAGGCGCATATACATGCCGCCACAATGACTCTTGGCCATTCACATCTTGAAGCATGCGAAATCATGTTTACGGAGCTTGCGAATTTCATTGATGAGGTTTCTTCAGAGACGGAGGGAAAACCAAAGTGGAAGATTCAGAAGTCTCGCCGTGAAGAGCTTCGAATCCATATTGCAAATATATTTCGTGCTGTTGCTGAGAATGTATGGCCTGGCATGCTGGCCCGTAAACCAGTTTTCCGTCTCCACTATCTGAAGTTCATTGATGAGACAACCAGACAGATCCTAACAGCTCCTACTGAAAACTTCCAAGATATGCAGCCACTCCGCTATGCACTTGCTTCTGTTTTAAGATCACTAGCTCCTGAATTTGTTGAGTCAAAATCAGAGAAATTTGATGTTAGGACTAGAAAGAAATTGTTTGATCTTCTTCTTTCCTGGTGTGATGAAACAGGCACCAATTATGGTCAAGACGGTGTTAGTGATTACCGGCGAGAAGTAGAACGTTACAAGTCCTCTCAGAATGCTCGGTCAAAAGATTCTGTGGACAAAATATCATTTGATAAAGAACTGAGTGAACAAGTTGAGGCAATCCAGTGGGCCTCCATGAATGCTATGGCTTCACTCCTATATGGGCCTTGCTTTGATGATAATGCGAGAAAGATGAGTGGGCGGGTTATATCTTGGATCAACAGTTTGTTCAATGAGCCTGCGCCTAGGGCTCCATTTGGATACTCGCCAGCTGATCCTAGAACTCCATCTTATTCAAAGTACACAGGAGAAGGTGGCCGTGGAACTGCTGGTCGTGATAGGCATAGGGGTGGTCATCATCGCATTTCTTTAGCAAAACTAGCTCTGAAGAATCTATTACAGACAAATTTGGACCTGTTTCCTGCTTGTATTGATCAGTGCTATTACTCTGATGCTGCCATAGCTGATGGTTACTTCAGTGTGCTAGCTGAAGTCTACATGCGCCAAGAGATACCGAAATGTGAAATCCAGAGACTTTTGAGCCTGATTCTCTACAAGGTGGTGGATCCATCAAGACAAATCCGTGATGATGCACTTCAGATGCTTGAGACACTTTCTGTTCGTGAGTGGGCTGAGGATGGCATTGAGGGCTCAGGAAATTATCGGGCTGCTGTTGTGGGTAACCTTCCTGATTCCTACCAACAATTCCAATACAAGCTCTCATGCAAACTTGCCAAAGATCATCCTGAGTTGAGTCAGCTCCTTTGCGAGGAGATTATGCAAAGGCAACTTGATGCTGTTGATATAATTGCACAACATCAGGTCTTAACATGCATGGCTCCTTGGATTGAGAATCTAAATTTCTGGAAACTTAAGGACTCGGGATGGAGCGAAAGATTACTGAAAAGCCTTTACTATGTAACATGGCGGCATGGTGATCACTTCCCTGATGAAATTGAGAAACTTTGGAGCACTATTGCTAGCAAGCCAAGGAACATTAGCCCTGTTTTGGATTTCTTAATCACGAAAGGGATAGAGGACTGTGATTCAAATGCATCTGCAGAAATTAGTGGTGCGTTTGCTACATATTTCTCTGTTGCAAAGCGAGTAAGTTTATATTTAGCACGGGTATGTCCTCAGCGTACAATTGATCACCTGGTCTACCAGTTGGCTCAGCGGATGCTGGAGGATAGCATAGATCCAATTGGTCCGACTGCAAATAAGGGTGATGCTGGTGGAAATTTTGTCTTGGAATTCTCTCAAGGGCCTGCTGTTCCCCAAATTGCATCTCTTGTGGACATCCAGCCACACATGTCACCATTACTTGTTCGGGGTTCTCTTGATGGTCCGTTAAGGAATACTAGTGGGAGCCTTAGCTGGCGGACTGCAGGTGTGACAGGCCGAAGTATCTCAGGCCCTATAGGTCCAATGCCTCCTGAGCTGAACATTGTTCCTGCAAATGCAGGCAGATCAGGCCAGCTCCTTCCAGCATTAGTAAATATGTCGGGGCCTTTAATGGGGGTGAGAAGTTCAACTGGAAGTCTGCGGAGTCGCCATGTGTCCCGGGACAGTGGAGACTACCTTATTGATACTCCAAATTCTGGTGAAGATGGGTTGCACTCTGGGGTTGCCATGCATGGCATCAGTGCTAAAGAACTGCAGTCAGCCTTGCAGGGGCATCAGCAACATTCACTGACTCATGCAGATATAGCATTGATTTTACTTGCAGAAATTGCATATGAAAATGATGAAGATTTTCGGGAGCACTTGCCTCTGCTCTTTCACGTCACATTTGTTTCGATGGATAGTTCAGAAGACATTGTGCTGGAACACTGTCAACATCTCCTTGTTAATCTTCTATACTCTCTTGCAGGAAGGCACTTGGAACTATATGAGGTTGAAAATTGTGATGGAGAGAACAAGCAGCAGGTTGTGAGCCTGATCAAATATGTCCAGTCTAAGCGAGGAAGCATGATGTGGGAAAATGAGGACCCCACGGTTGTGAGATCTGAACTTCCAAGTGCAGCACTATTATCTGCACTAGTTCAGAGCATGGTAGATGCTATCTTCTTTCAAGGAGATCTTCGAGAGACTTGGGGTGCAGAGGCACTGAAATGGGCCATGGAGTGCACATCGAGACACCTTGCCTGCCGCTCGCATCAGATTTACCGTGCATTGCGGCCTAGTGTAACAAGTGATACATGTGTATTGCTCCTCCGGTGCCTTCATAGATGCCTAGGAAATCCAGTACCTCCAGTTTTGGGTTTCATAATGGAAATTCTGTTGACATTGCAAGTGATGGTGGAGAACATGGAACCAGAAAAAGTGATACTTTACCCCCAACTGTTTTGGGGCTGTGTAGCTATGATGCACACGGATTTTGTTCATGTCTACTGCCAAGTCCTTGAGCTCTTTTCTCGTGTGATTGACCGACTATCATTCCGTGACAGAACAACAGAAAATGTGCTCCTTTCGAGCATGCCTAGGGATGAGCTTGATACCAGTAATGACATAGGGGACTTCCAACGGTTGGAATCCAGGATGAGCTATGAGCAGTCTGCATCTGGGGGAAATCTGCCAACATTTGAAGGGGTGCAACCTCTTGTTCTTAAAGGACTTATGTCAACAGTTAGTCACGGTGTTTCCATTGAAGTTCTCTCACGGATCACAGTGCACTCATGTGACTCTATATTTGGAAATGCAGAGACACGACTCTTGATGCACATCACATGTTTACTTCCCTGGCTCTGCTTGCAGCTTAGCAAGGATCCAGTGATGGGGCCTGCTTCACCACTCCAGCAGCAGTACCAGAAAGCTTGCTCTGTTGCTGCCAACATCTCTGTTTGGTGTAGAGCAAAATCATTAGACGAATTAGCTACTGTATTTATGATCTACTCTCGTGGTGAGATCAAAAGTATCACCAACCTCCTTGCTTGTGTCTCGCCACTATTATGCAATGAGTGGTTCCCAAAGCACTCAGCTTTGGCTTTTGGGCACTTATTACGGCTACTGGAGAAAGGGCCTGTTGAGTATCAGCGTGTGATATTACTCATGCTCAAGGCGTTGCTCCAGCACACGCCAATGGATGCTGCCCAAAGTCCACACATGTATGCGATTGTGTCCCAGTTGGTGGAGAGCACATTGTGCTGGGAGGCACTGAGTGTATTGGAAGCGCTTCTGCAAAGCTGTAGCTCATTGCCAGGTTCTCACCCTCATGAATCTGGGTCGTTTGAGAATGGGATTGGCAGCAGCGATGATAAGATGCTAGCCCCTCAGACCTCATTTAAGGCTCGTAGTGGGCCGCTACAGTTTGGTCTGACATCACCGTTTGGAACAGGTTCAACACCAGCACAAGGGAGCTTAACTGAAACTGGAGTTTCATCTAGAGAAATGGCTTTGCATAACACCCGGCTTATTCTTGGGCGGGTTCTTGACAGCTGTGCCCTTGGGAGGAGAAGGGATTACAGAAGGCTGGTTCCTTTCGTAACTAATATTGGGAACCCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1981

Amino Acids

222.28

Weight (kDa)

6.29

Isoelectric Point (pI)

51.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MOR2-PAG1_N PF14222 11 - 413 5.1e-70 Cell morphogenesis N-terminal
MOR2-PAG1_mid PF14228 451 - 1568 0.0 Cell morphogenesis central region
MOR2-PAG1_C PF14225 1593 - 1875 9.9e-59 Cell morphogenesis C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014339)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G15680
fragaria_vesca FvH4_6g46050
malus_domestica MD09G1077600.v1.1 MD17G1067900.v1.1
prunus_persica Prupe.3G246500_v2.0.a1
pyrus_communis pycom09g00460
rosa_chinensis RchiOBHm_Chr2g0164371
rosa_laevigata RLG00000021455
rosa_multiflora Rmu_co8522507.1_g000001
rosa_roxburghii Rroxscaffold_2G00086620
rosa_rugosa Rorug02G0508100
rosa_samantha Rh2AG576100 Rh2BG587100 Rh2CG557900 Rh2DG596800
rosa_wichuraiana Rw2G047710 Rw2G047810

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1538
AarI CACCTGC 1 cut(s) 3818
Acc36I ACCTGC 3 cut(s) 1081, 3818, 4357
AccB1I GGYRCC 3 cut(s) 1599, 2423, 4659
AccB7I CCANNNNNTGG 4 cut(s) 1895, 4040, 4969, 5569
AccBSI CCGCTC 1 cut(s) 4593
AccI GTMKAC 4 cut(s) 988, 2934, 3600, 4830
AclI AACGTT 1 cut(s) 2473
AcoI YGGCCR 4 cut(s) 251, 829, 2005, 2755
AcuI CTGAAG 9 cut(s) 243, 734, 1299, 2058, 2243, 2846, 2899, 2949, 3020
AcyI GRCGYC 1 cut(s) 1600
AdeI CACNNNGTG 2 cut(s) 5583, 5600
AfaI GTAC 4 cut(s) 2741, 3583, 4689, 5246
AfeI AGCGCT 1 cut(s) 5613
AflII CTTAAG 1 cut(s) 3311
AflIII ACRYGT 4 cut(s) 3750, 4640, 5168, 5544
AhlI ACTAGT 3 cut(s) 29, 3800, 4480
AjiI CACGTC 1 cut(s) 4225
AjnI CCWGG 7 cut(s) 1066, 2179, 2405, 3594, 4976, 5180, 5638
AleI CACNNNNGTG 2 cut(s) 4439, 5118
Alw44I GTGCAC 4 cut(s) 156, 1491, 4567, 5111
AlwNI CAGNNNCTG 1 cut(s) 1970
Ama87I CYCGRG 2 cut(s) 3319, 4002
Aor51HI AGCGCT 1 cut(s) 5613
ApaLI GTGCAC 4 cut(s) 156, 1491, 4567, 5111
ArsI GACNNNNNNTTYG 4 cut(s) 880, 912, 5114, 5146
Asp700I GAANNNNTTC 4 cut(s) 2127, 4194, 5613, 5776
AspA2I CCTAGG 3 cut(s) 2684, 4675, 4922
AspLEI GCGC 7 cut(s) 75, 306, 1602, 1978, 2683, 2943, 5614
AsuC2I CCSGG 4 cut(s) 40, 4003, 4004, 5848
AsuII TTCGAA 1 cut(s) 2131
AsuNHI GCTAGC 3 cut(s) 2923, 3419, 5704
AvaI CYCGRG 2 cut(s) 3319, 4002
AvaII GGWCC 5 cut(s) 2851, 3647, 3785, 3863, 4429
AvrII CCTAGG 3 cut(s) 2684, 4675, 4922
BaeGI GKGCMC 6 cut(s) 160, 1495, 4571, 5115, 5436, 5884
BaeI ACNNNNGTAYC 2 cut(s) 4629, 4662
BalI TGGCCA 3 cut(s) 253, 831, 2007
BamHI GGATCC 2 cut(s) 3004, 5206
BanI GGYRCC 3 cut(s) 1599, 2423, 4659
BanII GRGCYC 5 cut(s) 1676, 1696, 2692, 3092, 4851
BauI CACGAG 2 cut(s) 4857, 5337
BbsI GAAGAC 3 cut(s) 485, 743, 4260
BbvCI CCTCAGC 2 cut(s) 3072, 3576
BceAI ACGGC 3 cut(s) 2103, 2742, 5459
BciT130I CCWGG 7 cut(s) 1068, 2181, 2407, 3596, 4978, 5182, 5640
BciVI GTATCC 1 cut(s) 2693
BclI TGATCA 4 cut(s) 2872, 3376, 3589, 4380
BcnI CCSGG 4 cut(s) 40, 4003, 4004, 5848
BcuI ACTAGT 3 cut(s) 29, 3800, 4480
BfmI CTRYAG 8 cut(s) 660, 892, 3498, 3825, 3858, 4097, 5626, 5744
BfoI RGCGCY 2 cut(s) 1603, 5615
BfrI CTTAAG 1 cut(s) 3311
BfuAI ACCTGC 3 cut(s) 1081, 3818, 4357
BfuI GTATCC 1 cut(s) 2693
BglII AGATCT 3 cut(s) 1742, 4445, 4519
BlnI CCTAGG 3 cut(s) 2684, 4675, 4922
BlpI GCTNAGC 2 cut(s) 3612, 5198
Bme18I GGWCC 5 cut(s) 2851, 3647, 3785, 3863, 4429
BmeT110I CYCGRG 2 cut(s) 3319, 4002
BmgBI CACGTC 1 cut(s) 4225
BmrI ACTGGG 1 cut(s) 5557
BmtI GCTAGC 3 cut(s) 2927, 3423, 5708
BmuI ACTGGG 1 cut(s) 5557
BoxI GACNNNNGTC 1 cut(s) 5059
BpiI GAAGAC 3 cut(s) 485, 743, 4260
BplI GAGNNNNNCTC 2 cut(s) 303, 335
BpmI CTGGAG 8 cut(s) 1258, 1362, 3644, 4677, 5219, 5471, 5492, 5832
Bpu10I CCTNAGC 5 cut(s) 3072, 3091, 3576, 3812, 3876
Bpu1102I GCTNAGC 2 cut(s) 3612, 5198
Bpu14I TTCGAA 1 cut(s) 2131
BpuEI CTTGAG 6 cut(s) 892, 939, 3065, 3684, 4865, 5480
BpuMI CCSGG 4 cut(s) 40, 4003, 4004, 5848
Bsa29I ATCGAT 2 cut(s) 1062, 1542
BsaBI GATNNNNATC 2 cut(s) 1058, 5162
BsaHI GRCGYC 1 cut(s) 1600
BsaWI WCCGGW 3 cut(s) 969, 1101, 4656
BsaXI ACNNNNNCTCC 2 cut(s) 1231, 1261
Bse118I RCCGGY 1 cut(s) 2457
Bse3DI GCAATG 6 cut(s) 693, 1875, 4613, 4727, 5401, 5633
Bse8I GATNNNNATC 2 cut(s) 1058, 5162
BseBI CCWGG 7 cut(s) 1068, 2181, 2407, 3596, 4978, 5182, 5640
BseCI ATCGAT 2 cut(s) 1062, 1542
BseJI GATNNNNATC 2 cut(s) 1058, 5162
BseMI GCAATG 6 cut(s) 693, 1875, 4613, 4727, 5401, 5633
BseRI GAGGAG 4 cut(s) 1568, 3224, 4643, 5905
BseSI GKGCMC 6 cut(s) 160, 1495, 4571, 5115, 5436, 5884
BseYI CCCAGC 1 cut(s) 5586
BsgI GTGCAG 6 cut(s) 258, 1109, 1413, 4461, 4482, 4560
Bsh1285I CGRYCG 1 cut(s) 1213
BshNI GGYRCC 3 cut(s) 1599, 2423, 4659
BshVI ATCGAT 2 cut(s) 1062, 1542
BsiEI CGRYCG 1 cut(s) 1213
BsiHKCI CYCGRG 2 cut(s) 3319, 4002
BsiSI CCGG 7 cut(s) 40, 970, 1102, 2458, 4003, 4657, 5848
BslFI GGGAC 5 cut(s) 572, 3985, 4019, 4970, 5545
BsmBI CGTCTC 3 cut(s) 1609, 2072, 2216
BsmFI GGGAC 5 cut(s) 572, 3985, 4019, 4970, 5545
BsmI GAATGC 5 cut(s) 75, 118, 615, 2497, 2584
BsoBI CYCGRG 2 cut(s) 3319, 4002
Bsp119I TTCGAA 1 cut(s) 2131
Bsp1720I GCTNAGC 2 cut(s) 3612, 5198
Bsp19I CCATGG 1 cut(s) 4560
BspDI ATCGAT 2 cut(s) 1062, 1542
BspHI TCATGA 2 cut(s) 820, 5653
BspMAI CTGCAG 3 cut(s) 3502, 3829, 4101
BspMI ACCTGC 3 cut(s) 1081, 3818, 4357
BspOI GCTAGC 3 cut(s) 2927, 3423, 5708
BspQI GCTCTTC 2 cut(s) 909, 2118
BspT104I TTCGAA 1 cut(s) 2131
BspT107I GGYRCC 3 cut(s) 1599, 2423, 4659
BspTI CTTAAG 1 cut(s) 3311
BsrBI CCGCTC 1 cut(s) 4593
BsrDI GCAATG 6 cut(s) 693, 1875, 4613, 4727, 5401, 5633
BsrFI RCCGGY 1 cut(s) 2457
BssAI RCCGGY 1 cut(s) 2457
BssNAI GTATAC 1 cut(s) 989
BssNI GRCGYC 1 cut(s) 1600
BssSI CACGAG 2 cut(s) 4857, 5337
BssT1I CCWWGG 9 cut(s) 942, 1926, 2684, 3281, 3428, 4560, 4675, 4922, 5884
Bst1107I GTATAC 1 cut(s) 989
Bst2BI CACGAG 2 cut(s) 4857, 5337
Bst2UI CCWGG 7 cut(s) 1068, 2181, 2407, 3596, 4978, 5182, 5640
Bst6I CTCTTC 5 cut(s) 384, 909, 971, 1194, 2118
BstACI GRCGYC 1 cut(s) 1600
BstAFI CTTAAG 1 cut(s) 3311
BstAPI GCANNNNNTGC 2 cut(s) 4172, 5583
BstBI TTCGAA 1 cut(s) 2131
BstDSI CCRYGG 3 cut(s) 2758, 4434, 4560
BstEII GGTNACC 1 cut(s) 3119
BstENI CCTNNNNNAGG 1 cut(s) 3206
BstH2I RGCGCY 2 cut(s) 1603, 5615
BstHHI GCGC 7 cut(s) 75, 306, 1602, 1978, 2683, 2943, 5614
BstMCI CGRYCG 1 cut(s) 1213
BstNI CCWGG 7 cut(s) 1068, 2181, 2407, 3596, 4978, 5182, 5640
BstPAI GACNNNNGTC 1 cut(s) 5059
BstPI GGTNACC 1 cut(s) 3119
BstSFI CTRYAG 8 cut(s) 660, 892, 3498, 3825, 3858, 4097, 5626, 5744
BstSLI GKGCMC 6 cut(s) 160, 1495, 4571, 5115, 5436, 5884
BstV2I GAAGAC 3 cut(s) 485, 743, 4260
BstX2I RGATCY 9 cut(s) 1742, 1930, 1967, 2250, 3004, 3637, 4445, 4519, 5206
BstYI RGATCY 9 cut(s) 1742, 1930, 1967, 2250, 3004, 3637, 4445, 4519, 5206
BstZ17I GTATAC 1 cut(s) 989
Bsu15I ATCGAT 2 cut(s) 1062, 1542
BsuI GTATCC 1 cut(s) 2693
BsuTUI ATCGAT 2 cut(s) 1062, 1542
BtgI CCRYGG 3 cut(s) 2758, 4434, 4560
BtgZI GCGATG 2 cut(s) 2783, 5706
BtrI CACGTC 1 cut(s) 4225
BtsI GCAGTG 3 cut(s) 1024, 1092, 1143
BveI ACCTGC 3 cut(s) 1081, 3818, 4357
CaiI CAGNNNCTG 1 cut(s) 1970
CciI TCATGA 2 cut(s) 820, 5653
CfoI GCGC 7 cut(s) 75, 306, 1602, 1978, 2683, 2943, 5614
Cfr10I RCCGGY 1 cut(s) 2457
Cfr9I CCCGGG 1 cut(s) 4002
ClaI ATCGAT 2 cut(s) 1062, 1542
CseI GACGC 2 cut(s) 1023, 1353
CsiI ACCWGGT 1 cut(s) 3594
Csp6I GTAC 4 cut(s) 2740, 3582, 4688, 5245
CviQI GTAC 4 cut(s) 2740, 3582, 4688, 5245
DinI GGCGCC 1 cut(s) 1601
DraIII CACNNNGTG 2 cut(s) 5583, 5600
EaeI YGGCCR 4 cut(s) 251, 829, 2005, 2755
Eam1104I CTCTTC 5 cut(s) 384, 909, 971, 1194, 2118
EarI CTCTTC 5 cut(s) 384, 909, 971, 1194, 2118
EciI GGCGGA 1 cut(s) 3835
Ecl136II GAGCTC 1 cut(s) 4849
Eco130I CCWWGG 9 cut(s) 942, 1926, 2684, 3281, 3428, 4560, 4675, 4922, 5884
Eco24I GRGCYC 5 cut(s) 1676, 1696, 2692, 3092, 4851
Eco32I GATATC 2 cut(s) 365, 962
Eco47I GGWCC 5 cut(s) 2851, 3647, 3785, 3863, 4429
Eco47III AGCGCT 1 cut(s) 5613
Eco53kI GAGCTC 1 cut(s) 4849
Eco57I CTGAAG 9 cut(s) 243, 734, 1299, 2058, 2243, 2846, 2899, 2949, 3020
Eco88I CYCGRG 2 cut(s) 3319, 4002
Eco91I GGTNACC 1 cut(s) 3119
EcoICRI GAGCTC 1 cut(s) 4849
EcoNI CCTNNNNNAGG 1 cut(s) 3206
EcoO109I RGGNCCY 6 cut(s) 3704, 3854, 3947, 4429, 5219, 5459
EcoO65I GGTNACC 1 cut(s) 3119
EcoRI GAATTC 3 cut(s) 1181, 1355, 3692
EcoRII CCWGG 7 cut(s) 1066, 2179, 2405, 3594, 4976, 5180, 5638
EcoRV GATATC 2 cut(s) 365, 962
EcoT14I CCWWGG 9 cut(s) 942, 1926, 2684, 3281, 3428, 4560, 4675, 4922, 5884
EcoT22I ATGCAT 5 cut(s) 118, 327, 3275, 3496, 4077
EcoT38I GRGCYC 5 cut(s) 1676, 1696, 2692, 3092, 4851
EgeI GGCGCC 1 cut(s) 1601
EheI GGCGCC 1 cut(s) 1601
ErhI CCWWGG 9 cut(s) 942, 1926, 2684, 3281, 3428, 4560, 4675, 4922, 5884
Esp3I CGTCTC 3 cut(s) 1609, 2072, 2216
FalI AAGNNNNNCTT 6 cut(s) 597, 629, 4506, 4538, 4755, 4787
FaqI GGGAC 5 cut(s) 572, 3985, 4019, 4970, 5545
FauI CCCGC 5 cut(s) 408, 798, 1293, 2634, 5856
FauNDI CATATG 2 cut(s) 696, 4177
FbaI TGATCA 4 cut(s) 2872, 3376, 3589, 4380
FblI GTMKAC 4 cut(s) 988, 2934, 3600, 4830
FriOI GRGCYC 5 cut(s) 1676, 1696, 2692, 3092, 4851
GlaI GCGC 7 cut(s) 74, 305, 1601, 1977, 2682, 2942, 5613
GsaI CCCAGC 1 cut(s) 5590
GsuI CTGGAG 8 cut(s) 1258, 1362, 3644, 4677, 5219, 5471, 5492, 5832
HaeII RGCGCY 2 cut(s) 1603, 5615
HapII CCGG 7 cut(s) 40, 970, 1102, 2458, 4003, 4657, 5848
HgaI GACGC 2 cut(s) 1023, 1353
HhaI GCGC 7 cut(s) 75, 306, 1602, 1978, 2683, 2943, 5614
Hin1I GRCGYC 1 cut(s) 1600
Hin6I GCGC 7 cut(s) 73, 304, 1600, 1976, 2681, 2941, 5612
HinP1I GCGC 7 cut(s) 73, 304, 1600, 1976, 2681, 2941, 5612
HincII GTYRAC 3 cut(s) 4277, 4725, 5064
HindII GTYRAC 3 cut(s) 4277, 4725, 5064
HindIII AAGCTT 2 cut(s) 449, 5253
HpaII CCGG 7 cut(s) 40, 970, 1102, 2458, 4003, 4657, 5848
Hpy99I CGWCG 2 cut(s) 21, 1131
HpyCH4IV ACGT 3 cut(s) 1777, 2473, 4224
HpySE526I ACGT 3 cut(s) 1777, 2473, 4224
Hsp92I GRCGYC 1 cut(s) 1600
HspAI GCGC 7 cut(s) 73, 304, 1600, 1976, 2681, 2941, 5612
KasI GGCGCC 1 cut(s) 1599
Ksp22I TGATCA 4 cut(s) 2872, 3376, 3589, 4380
LguI GCTCTTC 2 cut(s) 909, 2118
MabI ACCWGGT 1 cut(s) 3594
MaeII ACGT 3 cut(s) 1777, 2473, 4224
MbiI CCGCTC 1 cut(s) 4593
MfeI CAATTG 4 cut(s) 858, 1893, 3585, 3642
MflI RGATCY 9 cut(s) 1742, 1930, 1967, 2250, 3004, 3637, 4445, 4519, 5206
MlsI TGGCCA 3 cut(s) 253, 831, 2007
MluNI TGGCCA 3 cut(s) 253, 831, 2007
Mly113I GGCGCC 1 cut(s) 1600
MmeI TCCRAC 7 cut(s) 340, 652, 991, 1363, 3674, 4950, 4987
Mox20I TGGCCA 3 cut(s) 253, 831, 2007
Mph1103I ATGCAT 5 cut(s) 118, 327, 3275, 3496, 4077
MroXI GAANNNNTTC 4 cut(s) 2127, 4194, 5613, 5776
MscI TGGCCA 3 cut(s) 253, 831, 2007
Msp20I TGGCCA 3 cut(s) 253, 831, 2007
MspA1I CMGCKG 3 cut(s) 2711, 3616, 5877
MspCI CTTAAG 1 cut(s) 3311
MspI CCGG 7 cut(s) 40, 970, 1102, 2458, 4003, 4657, 5848
MunI CAATTG 4 cut(s) 858, 1893, 3585, 3642
Mva1269I GAATGC 5 cut(s) 75, 118, 615, 2497, 2584
MvaI CCWGG 7 cut(s) 1068, 2181, 2407, 3596, 4978, 5182, 5640
NarI GGCGCC 1 cut(s) 1600
NciI CCSGG 4 cut(s) 40, 4003, 4004, 5848
NcoI CCATGG 1 cut(s) 4560
NdeI CATATG 2 cut(s) 696, 4177
NheI GCTAGC 3 cut(s) 2923, 3419, 5704
NsiI ATGCAT 5 cut(s) 118, 327, 3275, 3496, 4077
NspV TTCGAA 1 cut(s) 2131
OliI CACNNNNGTG 2 cut(s) 4439, 5118
PaeI GCATGC 3 cut(s) 2028, 2188, 4921
PagI TCATGA 2 cut(s) 820, 5653
PaqCI CACCTGC 1 cut(s) 3818
PciI ACATGT 4 cut(s) 3750, 4640, 5168, 5544
PciSI GCTCTTC 2 cut(s) 909, 2118
PcsI WCGNNNNNNNCGW 1 cut(s) 2048
PctI GAATGC 5 cut(s) 75, 118, 615, 2497, 2584
PdmI GAANNNNTTC 4 cut(s) 2127, 4194, 5613, 5776
PflFI GACNNNGTC 1 cut(s) 1571
PflMI CCANNNNNTGG 4 cut(s) 1895, 4040, 4969, 5569
PfoI TCCNGGA 1 cut(s) 4976
PluTI GGCGCC 1 cut(s) 1603
PpuMI RGGWCCY 1 cut(s) 4429
PscI ACATGT 4 cut(s) 3750, 4640, 5168, 5544
PshAI GACNNNNGTC 1 cut(s) 5059
PsiI TTATAA 1 cut(s) 1538
Psp124BI GAGCTC 1 cut(s) 4851
Psp1406I AACGTT 1 cut(s) 2473
Psp5II RGGWCCY 1 cut(s) 4429
Psp6I CCWGG 7 cut(s) 1066, 2179, 2405, 3594, 4976, 5180, 5638
PspEI GGTNACC 1 cut(s) 3119
PspFI CCCAGC 1 cut(s) 5586
PspGI CCWGG 7 cut(s) 1066, 2179, 2405, 3594, 4976, 5180, 5638
PspPPI RGGWCCY 1 cut(s) 4429
PstI CTGCAG 3 cut(s) 3502, 3829, 4101
PstNI CAGNNNCTG 1 cut(s) 1970
PsuI RGATCY 9 cut(s) 1742, 1930, 1967, 2250, 3004, 3637, 4445, 4519, 5206
PsyI GACNNNGTC 1 cut(s) 1571
PvuII CAGCTG 2 cut(s) 2711, 5877
RsaI GTAC 4 cut(s) 2741, 3583, 4689, 5246
RsaNI GTAC 4 cut(s) 2740, 3582, 4688, 5245
SacI GAGCTC 1 cut(s) 4851
SapI GCTCTTC 2 cut(s) 909, 2118
SexAI ACCWGGT 1 cut(s) 3594
SfcI CTRYAG 8 cut(s) 660, 892, 3498, 3825, 3858, 4097, 5626, 5744
SfoI GGCGCC 1 cut(s) 1601
SfuI TTCGAA 1 cut(s) 2131
SinI GGWCC 5 cut(s) 2851, 3647, 3785, 3863, 4429
SmaI CCCGGG 1 cut(s) 4004
SmlI CTYRAG 7 cut(s) 871, 954, 3044, 3311, 3699, 4844, 5495
SmoI CTYRAG 7 cut(s) 871, 954, 3044, 3311, 3699, 4844, 5495
SpeI ACTAGT 3 cut(s) 29, 3800, 4480
SphI GCATGC 3 cut(s) 2028, 2188, 4921
SspDI GGCGCC 1 cut(s) 1599
SspI AATATT 3 cut(s) 810, 1665, 5932
SstI GAGCTC 1 cut(s) 4851
StyI CCWWGG 9 cut(s) 942, 1926, 2684, 3281, 3428, 4560, 4675, 4922, 5884
TaiI ACGT 3 cut(s) 1780, 2476, 4227
TaqI TCGA 9 cut(s) 24, 886, 1062, 1542, 2131, 4238, 4525, 4574, 4913
TaqII GACCGA 3 cut(s) 1199, 2487, 4884
TatI WGTACW 1 cut(s) 2739
TauI GCSGC 5 cut(s) 1991, 3370, 4593, 4621, 5743
TspMI CCCGGG 1 cut(s) 4002
Tth111I GACNNNGTC 1 cut(s) 1571
Van91I CCANNNNNTGG 4 cut(s) 1895, 4040, 4969, 5569
Vha464I CTTAAG 1 cut(s) 3311
VneI GTGCAC 4 cut(s) 156, 1491, 4567, 5111
VpaK11BI GGWCC 5 cut(s) 2851, 3647, 3785, 3863, 4429
XagI CCTNNNNNAGG 1 cut(s) 3206
XbaI TCTAGA 1 cut(s) 5822
XcmI CCANNNNNNNNNTGG 1 cut(s) 2581
XmaI CCCGGG 1 cut(s) 4002
XmaJI CCTAGG 3 cut(s) 2684, 4675, 4922
XmiI GTMKAC 4 cut(s) 988, 2934, 3600, 4830
XmnI GAANNNNTTC 4 cut(s) 2127, 4194, 5613, 5776
Zsp2I ATGCAT 5 cut(s) 118, 327, 3275, 3496, 4077
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.