PQQ enzyme repeat
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0168961 |
| rosa_samantha | Rh2CG588800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 93 |
| AciI | CCGC | 2 cut(s) | 51, 159 |
| AclWI | GGATC | 2 cut(s) | 123, 286 |
| AcsI | RAATTY | 1 cut(s) | 124 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 168, 191, 227 |
| AjnI | CCWGG | 2 cut(s) | 37, 62 |
| AluBI | AGCT | 1 cut(s) | 74 |
| AluI | AGCT | 1 cut(s) | 74 |
| AlwI | GGATC | 2 cut(s) | 123, 286 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 38, 77 |
| AoxI | GGCC | 2 cut(s) | 35, 242 |
| ApeKI | GCWGC | 1 cut(s) | 71 |
| ApoI | RAATTY | 1 cut(s) | 124 |
| AseI | ATTAAT | 1 cut(s) | 180 |
| AspS9I | GGNCC | 3 cut(s) | 35, 242, 296 |
| AsuC2I | CCSGG | 2 cut(s) | 163, 240 |
| AvaII | GGWCC | 1 cut(s) | 296 |
| BbvI | GCAGC | 1 cut(s) | 83 |
| BccI | CCATC | 3 cut(s) | 148, 162, 221 |
| BceAI | ACGGC | 1 cut(s) | 228 |
| BciT130I | CCWGG | 2 cut(s) | 39, 64 |
| BcnI | CCSGG | 2 cut(s) | 163, 240 |
| BisI | GCNGC | 1 cut(s) | 72 |
| BlsI | GCNGC | 1 cut(s) | 73 |
| Bme1390I | CCNGG | 4 cut(s) | 39, 64, 163, 240 |
| Bme18I | GGWCC | 1 cut(s) | 296 |
| BmgT120I | GGNCC | 3 cut(s) | 35, 242, 296 |
| BmiI | GGNNCC | 2 cut(s) | 61, 243 |
| BmrFI | CCNGG | 4 cut(s) | 39, 64, 163, 240 |
| BpuMI | CCSGG | 2 cut(s) | 163, 240 |
| BsaJI | CCNNGG | 3 cut(s) | 63, 162, 239 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 168, 191, 227 |
| Bse3DI | GCAATG | 1 cut(s) | 196 |
| BseBI | CCWGG | 2 cut(s) | 39, 64 |
| BseDI | CCNNGG | 3 cut(s) | 63, 162, 239 |
| BseGI | GGATG | 1 cut(s) | 173 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 168, 191, 227 |
| BseMI | GCAATG | 1 cut(s) | 196 |
| BseRI | GAGGAG | 1 cut(s) | 69 |
| BseXI | GCAGC | 1 cut(s) | 83 |
| BseYI | CCCAGC | 1 cut(s) | 221 |
| BshFI | GGCC | 2 cut(s) | 37, 244 |
| BsiSI | CCGG | 2 cut(s) | 162, 239 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 168, 191, 227 |
| BsnI | GGCC | 2 cut(s) | 37, 244 |
| Bsp143I | GATC | 2 cut(s) | 115, 278 |
| BspACI | CCGC | 2 cut(s) | 51, 159 |
| BspANI | GGCC | 2 cut(s) | 37, 244 |
| BspLI | GGNNCC | 2 cut(s) | 61, 243 |
| BspPI | GGATC | 2 cut(s) | 123, 286 |
| BsrDI | GCAATG | 1 cut(s) | 196 |
| BssECI | CCNNGG | 3 cut(s) | 63, 162, 239 |
| BssMI | GATC | 2 cut(s) | 115, 278 |
| BssNAI | GTATAC | 1 cut(s) | 94 |
| Bst1107I | GTATAC | 1 cut(s) | 94 |
| Bst2UI | CCWGG | 2 cut(s) | 39, 64 |
| Bst4CI | ACNGT | 1 cut(s) | 263 |
| BstDEI | CTNAG | 1 cut(s) | 10 |
| BstF5I | GGATG | 1 cut(s) | 173 |
| BstKTI | GATC | 2 cut(s) | 118, 281 |
| BstMBI | GATC | 2 cut(s) | 115, 278 |
| BstNI | CCWGG | 2 cut(s) | 39, 64 |
| BstSCI | CCNGG | 4 cut(s) | 37, 62, 161, 238 |
| BstV1I | GCAGC | 1 cut(s) | 83 |
| BstZ17I | GTATAC | 1 cut(s) | 94 |
| BsuRI | GGCC | 2 cut(s) | 37, 244 |
| BtgZI | GCGATG | 1 cut(s) | 240 |
| BtsCI | GGATG | 1 cut(s) | 173 |
| CaiI | CAGNNNCTG | 2 cut(s) | 38, 77 |
| Cfr13I | GGNCC | 3 cut(s) | 35, 242, 296 |
| CviJI | RGCY | 8 cut(s) | 8, 37, 74, 108, 215, 244, 257, 288 |
| CviKI_1 | RGCY | 8 cut(s) | 8, 37, 74, 108, 215, 244, 257, 288 |
| DdeI | CTNAG | 1 cut(s) | 10 |
| DpnI | GATC | 2 cut(s) | 117, 280 |
| DpnII | GATC | 2 cut(s) | 115, 278 |
| EciI | GGCGGA | 1 cut(s) | 66 |
| Eco47I | GGWCC | 1 cut(s) | 296 |
| EcoO109I | RGGNCCY | 2 cut(s) | 35, 242 |
| EcoRII | CCWGG | 2 cut(s) | 37, 62 |
| FaiI | YATR | 4 cut(s) | 94, 152, 205, 304 |
| FblI | GTMKAC | 1 cut(s) | 93 |
| Fnu4HI | GCNGC | 1 cut(s) | 72 |
| FokI | GGATG | 1 cut(s) | 180 |
| Fsp4HI | GCNGC | 1 cut(s) | 72 |
| GluI | GCNGC | 1 cut(s) | 72 |
| GsaI | CCCAGC | 1 cut(s) | 225 |
| HaeIII | GGCC | 2 cut(s) | 37, 244 |
| HapII | CCGG | 2 cut(s) | 162, 239 |
| HpaII | CCGG | 2 cut(s) | 162, 239 |
| Hpy166II | GTNNAC | 1 cut(s) | 94 |
| Hpy188I | TCNGA | 1 cut(s) | 115 |
| Hpy8I | GTNNAC | 1 cut(s) | 94 |
| Hpy99I | CGWCG | 1 cut(s) | 214 |
| HpyCH4III | ACNGT | 1 cut(s) | 263 |
| HpyCH4V | TGCA | 1 cut(s) | 176 |
| HpyF3I | CTNAG | 1 cut(s) | 10 |
| Kzo9I | GATC | 2 cut(s) | 115, 278 |
| Lsp1109I | GCAGC | 1 cut(s) | 83 |
| MalI | GATC | 2 cut(s) | 117, 280 |
| MboI | GATC | 2 cut(s) | 115, 278 |
| MluCI | AATT | 2 cut(s) | 124, 177 |
| MnlI | CCTC | 4 cut(s) | 47, 50, 195, 287 |
| MseI | TTAA | 1 cut(s) | 180 |
| MspI | CCGG | 2 cut(s) | 162, 239 |
| MspR9I | CCNGG | 4 cut(s) | 39, 64, 163, 240 |
| MvaI | CCWGG | 2 cut(s) | 39, 64 |
| NciI | CCSGG | 2 cut(s) | 163, 240 |
| NdeII | GATC | 2 cut(s) | 115, 278 |
| NlaIV | GGNNCC | 2 cut(s) | 61, 243 |
| PkrI | GCNGC | 1 cut(s) | 73 |
| PshBI | ATTAAT | 1 cut(s) | 180 |
| Psp6I | CCWGG | 2 cut(s) | 37, 62 |
| PspFI | CCCAGC | 1 cut(s) | 221 |
| PspGI | CCWGG | 2 cut(s) | 37, 62 |
| PspN4I | GGNNCC | 2 cut(s) | 61, 243 |
| PspPI | GGNCC | 3 cut(s) | 35, 242, 296 |
| PstNI | CAGNNNCTG | 2 cut(s) | 38, 77 |
| SaqAI | TTAA | 1 cut(s) | 180 |
| SatI | GCNGC | 1 cut(s) | 72 |
| Sau3AI | GATC | 2 cut(s) | 115, 278 |
| Sau96I | GGNCC | 3 cut(s) | 35, 242, 296 |
| ScrFI | CCNGG | 4 cut(s) | 39, 64, 163, 240 |
| SetI | ASST | 2 cut(s) | 65, 76 |
| SinI | GGWCC | 1 cut(s) | 296 |
| Sse9I | AATT | 2 cut(s) | 124, 177 |
| SsiI | CCGC | 2 cut(s) | 51, 159 |
| SspI | AATATT | 1 cut(s) | 103 |
| StyD4I | CCNGG | 4 cut(s) | 37, 62, 161, 238 |
| TaaI | ACNGT | 1 cut(s) | 263 |
| TaqI | TCGA | 1 cut(s) | 281 |
| TasI | AATT | 2 cut(s) | 124, 177 |
| Tru1I | TTAA | 1 cut(s) | 180 |
| Tru9I | TTAA | 1 cut(s) | 180 |
| TseI | GCWGC | 1 cut(s) | 71 |
| VpaK11BI | GGWCC | 1 cut(s) | 296 |
| VspI | ATTAAT | 1 cut(s) | 180 |
| XapI | RAATTY | 1 cut(s) | 124 |
| XmiI | GTMKAC | 1 cut(s) | 93 |