F-box kelch-repeat protein At3g06240-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_roxburghii | Rroxscaffold_2G00154100 |
| rosa_samantha | Rh2DG023200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 375 |
| AciI | CCGC | 2 cut(s) | 115, 205 |
| AclWI | GGATC | 1 cut(s) | 151 |
| AcoI | YGGCCR | 2 cut(s) | 3, 150 |
| AcsI | RAATTY | 3 cut(s) | 125, 275, 429 |
| AfaI | GTAC | 4 cut(s) | 119, 175, 233, 533 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 375, 497 |
| AflIII | ACRYGT | 1 cut(s) | 361 |
| AgsI | TTSAA | 6 cut(s) | 72, 124, 257, 269, 352, 485 |
| AjnI | CCWGG | 1 cut(s) | 496 |
| AluBI | AGCT | 1 cut(s) | 375 |
| AluI | AGCT | 1 cut(s) | 375 |
| AlwI | GGATC | 1 cut(s) | 151 |
| AoxI | GGCC | 2 cut(s) | 3, 150 |
| ApoI | RAATTY | 3 cut(s) | 125, 275, 429 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 421, 453 |
| AsuHPI | GGTGA | 2 cut(s) | 205, 311 |
| BalI | TGGCCA | 2 cut(s) | 5, 152 |
| BccI | CCATC | 1 cut(s) | 277 |
| BciT130I | CCWGG | 1 cut(s) | 498 |
| BmcAI | AGTACT | 1 cut(s) | 533 |
| Bme1390I | CCNGG | 1 cut(s) | 498 |
| BmrFI | CCNGG | 1 cut(s) | 498 |
| BmsI | GCATC | 1 cut(s) | 213 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 130, 162 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 375, 497 |
| BseBI | CCWGG | 1 cut(s) | 498 |
| BseGI | GGATG | 2 cut(s) | 228, 288 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 375, 497 |
| BseMII | CTCAG | 1 cut(s) | 563 |
| BseYI | CCCAGC | 1 cut(s) | 375 |
| BshFI | GGCC | 2 cut(s) | 5, 152 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 375, 497 |
| BsnI | GGCC | 2 cut(s) | 5, 152 |
| Bsp143I | GATC | 2 cut(s) | 143, 517 |
| BspACI | CCGC | 2 cut(s) | 115, 205 |
| BspANI | GGCC | 2 cut(s) | 5, 152 |
| BspCNI | CTCAG | 1 cut(s) | 562 |
| BspPI | GGATC | 1 cut(s) | 151 |
| BssMI | GATC | 2 cut(s) | 143, 517 |
| Bst2UI | CCWGG | 1 cut(s) | 498 |
| Bst6I | CTCTTC | 1 cut(s) | 54 |
| BstC8I | GCNNGC | 1 cut(s) | 512 |
| BstDEI | CTNAG | 2 cut(s) | 356, 549 |
| BstF5I | GGATG | 2 cut(s) | 228, 288 |
| BstKTI | GATC | 2 cut(s) | 146, 520 |
| BstMBI | GATC | 2 cut(s) | 143, 517 |
| BstNI | CCWGG | 1 cut(s) | 498 |
| BstNSI | RCATGY | 1 cut(s) | 365 |
| BstSCI | CCNGG | 1 cut(s) | 496 |
| BstX2I | RGATCY | 1 cut(s) | 143 |
| BstYI | RGATCY | 1 cut(s) | 143 |
| BsuRI | GGCC | 2 cut(s) | 5, 152 |
| BtsCI | GGATG | 2 cut(s) | 228, 288 |
| Cac8I | GCNNGC | 1 cut(s) | 512 |
| CsiI | ACCWGGT | 1 cut(s) | 496 |
| Csp6I | GTAC | 4 cut(s) | 118, 174, 232, 532 |
| CviAII | CATG | 2 cut(s) | 362, 370 |
| CviJI | RGCY | 6 cut(s) | 5, 152, 287, 375, 490, 510 |
| CviKI_1 | RGCY | 6 cut(s) | 5, 152, 287, 375, 490, 510 |
| CviQI | GTAC | 4 cut(s) | 118, 174, 232, 532 |
| DdeI | CTNAG | 2 cut(s) | 356, 549 |
| DpnI | GATC | 2 cut(s) | 145, 519 |
| DpnII | GATC | 2 cut(s) | 143, 517 |
| EaeI | YGGCCR | 2 cut(s) | 3, 150 |
| Eam1104I | CTCTTC | 1 cut(s) | 54 |
| EarI | CTCTTC | 1 cut(s) | 54 |
| EcoRII | CCWGG | 1 cut(s) | 496 |
| FaeI | CATG | 2 cut(s) | 365, 373 |
| FatI | CATG | 2 cut(s) | 361, 369 |
| FauNDI | CATATG | 1 cut(s) | 188 |
| FokI | GGATG | 2 cut(s) | 235, 295 |
| GsaI | CCCAGC | 1 cut(s) | 379 |
| HaeIII | GGCC | 2 cut(s) | 5, 152 |
| Hin1II | CATG | 2 cut(s) | 365, 373 |
| HinfI | GANTC | 5 cut(s) | 28, 104, 419, 436, 481 |
| HphI | GGTGA | 2 cut(s) | 205, 311 |
| Hpy166II | GTNNAC | 1 cut(s) | 234 |
| Hpy188I | TCNGA | 5 cut(s) | 103, 109, 282, 526, 552 |
| Hpy188III | TCNNGA | 2 cut(s) | 423, 485 |
| Hpy8I | GTNNAC | 1 cut(s) | 234 |
| HpyAV | CCTTC | 1 cut(s) | 391 |
| HpyCH4V | TGCA | 1 cut(s) | 335 |
| HpyF3I | CTNAG | 2 cut(s) | 356, 549 |
| Hsp92II | CATG | 2 cut(s) | 365, 373 |
| Kzo9I | GATC | 2 cut(s) | 143, 517 |
| LpnPI | CCDG | 8 cut(s) | 134, 156, 361, 408, 483, 504, 510, 524 |
| LweI | GCATC | 1 cut(s) | 213 |
| MabI | ACCWGGT | 1 cut(s) | 496 |
| MaeIII | GTNAC | 1 cut(s) | 130 |
| MalI | GATC | 2 cut(s) | 145, 519 |
| MboI | GATC | 2 cut(s) | 143, 517 |
| MboII | GAAGA | 5 cut(s) | 23, 71, 257, 337, 340 |
| MflI | RGATCY | 1 cut(s) | 143 |
| MlsI | TGGCCA | 2 cut(s) | 5, 152 |
| MluCI | AATT | 5 cut(s) | 36, 110, 125, 275, 429 |
| MluNI | TGGCCA | 2 cut(s) | 5, 152 |
| MlyI | GAGTC | 1 cut(s) | 445 |
| MnlI | CCTC | 3 cut(s) | 134, 409, 558 |
| Mox20I | TGGCCA | 2 cut(s) | 5, 152 |
| MscI | TGGCCA | 2 cut(s) | 5, 152 |
| MseI | TTAA | 2 cut(s) | 441, 568 |
| MslI | CAYNNNNRTG | 1 cut(s) | 191 |
| Msp20I | TGGCCA | 2 cut(s) | 5, 152 |
| MspR9I | CCNGG | 1 cut(s) | 498 |
| MvaI | CCWGG | 1 cut(s) | 498 |
| NdeI | CATATG | 1 cut(s) | 188 |
| NdeII | GATC | 2 cut(s) | 143, 517 |
| NlaIII | CATG | 2 cut(s) | 365, 373 |
| NspI | RCATGY | 1 cut(s) | 365 |
| PciI | ACATGT | 1 cut(s) | 361 |
| PfeI | GAWTC | 4 cut(s) | 28, 104, 419, 481 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 375 |
| PleI | GAGTC | 1 cut(s) | 444 |
| PpsI | GAGTC | 1 cut(s) | 444 |
| PscI | ACATGT | 1 cut(s) | 361 |
| Psp6I | CCWGG | 1 cut(s) | 496 |
| PspFI | CCCAGC | 1 cut(s) | 375 |
| PspGI | CCWGG | 1 cut(s) | 496 |
| PsuI | RGATCY | 1 cut(s) | 143 |
| RsaI | GTAC | 4 cut(s) | 119, 175, 233, 533 |
| RsaNI | GTAC | 4 cut(s) | 118, 174, 232, 532 |
| RseI | CAYNNNNRTG | 1 cut(s) | 191 |
| SaqAI | TTAA | 2 cut(s) | 441, 568 |
| Sau3AI | GATC | 2 cut(s) | 143, 517 |
| ScaI | AGTACT | 1 cut(s) | 533 |
| SchI | GAGTC | 1 cut(s) | 445 |
| ScrFI | CCNGG | 1 cut(s) | 498 |
| SetI | ASST | 3 cut(s) | 377, 502, 550 |
| SexAI | ACCWGGT | 1 cut(s) | 496 |
| SfaNI | GCATC | 1 cut(s) | 213 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 191 |
| Sse9I | AATT | 5 cut(s) | 36, 110, 125, 275, 429 |
| SsiI | CCGC | 2 cut(s) | 115, 205 |
| SspI | AATATT | 2 cut(s) | 181, 467 |
| StyD4I | CCNGG | 1 cut(s) | 496 |
| TasI | AATT | 5 cut(s) | 36, 110, 125, 275, 429 |
| TatI | WGTACW | 2 cut(s) | 231, 531 |
| TfiI | GAWTC | 4 cut(s) | 28, 104, 419, 481 |
| Tru1I | TTAA | 2 cut(s) | 441, 568 |
| Tru9I | TTAA | 2 cut(s) | 441, 568 |
| TspDTI | ATGAA | 2 cut(s) | 156, 212 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 375 |
| XapI | RAATTY | 3 cut(s) | 125, 275, 429 |
| XceI | RCATGY | 1 cut(s) | 365 |
| ZrmI | AGTACT | 1 cut(s) | 533 |