Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0024571

Physical Location & Seq

Genomic Coordinates Reverse (-)

49161307 .. 49165870

Gene Structure 4564 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG351000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1662 bp

ATGGGAGCAGCAAAGCAAACAGATTTAGCATGCATTTCAGAAGGTGAAGGGTCTTCATGTGTAGAACAACATGCCATCATTGAAGGAGCACCGATTGTGTCATCCTACAATGAAAAAATCCGTCCTCTGCTTGACGCCGTTGACAAGCTCAGGAGCCTCATGGTTATGGAGGAAGGCATTCAGCTCCCCACCATTGTTGATGTAGGTGACCAATCATCTGGCAAGTCCAGCGTCCTTGAATCCCTGGCCGGCATCAGCCTGCCACGTGGACAAGGTATCTGCACCAGGGTACCCCTTATAATGAGGCTTCAACACCACTCTAGTCCTGAACCAGAGTTCCAGTTGGAGTACAATGGCAAAGTTGAGCACACTGATGAGGTCAACATTGCTGATGATATTGTCAATGTCACCAATGTTATTGCTGGTGGAGGTAAGGGAATTTCTAACACCCCATTGACTCTGTTGGTGAAAAAGAATGGTGTTCCTGATTTGACTATGGTTGATCTCCCTGGAATCACTAGAGTTCCTGTTCATGGTCTGCCTGAGGATATCTATGATCAAATCAAAGACATGATCATGCATTATATAAAGCCTGAAGAGAGCATCATTCTCAATGTGTTGTCTGCTACTGTTGATTTTACAACTTGTGAATCCATCAGGATGTCACAGAGTGTGGATAAAGCTGGTGATAGGACTCTGGCTGTGGTCACAAAGGTTGATAAGGCGCCCGAAGGACTATTAGAGAAGGTTACAGCAGATGATGTTAGTATTGGTCTTGGTTATGTTTGTGTGAGGAACCGGATTGGAGATGAAACTAATGAGGAGGCAAGGGCTATATCTCAAAAACTTTTTCAAACTCATCCTTTGTTGTCCAAGATTGATAAATCTATGGTTGGAATTCCAGTTCTGGCTCAAAAGTTGGTGCAAATTCAAGCTTCTAGCATAGCTAGAAACTTGCCAGACATCGTCAAGAAGATAAATGACAAGCTGAGTTCTTGTCTTTTGGAGTTGAACAAGATGCCAAAGAAAATGTCATCTGTTAGTGAAGCCATGACCACGTTTATGCAGATCATCGGATCATCAAAAGAATCGCTTAGGAAAATTCTGGTATGCACCAGAAGAGCTGGCCGTAATCTTATAACAAGGATGAAAGAAAGGTCAGTTCAGTGGATGATGGAGATAGTGGAAATGGAGAACCTGATTGATTATACATGTAATCCAGAATATGTATCCGAATGTAGTAGGCTTATGGGTCAACAAGGCACATTTATACATTTGGTGTTAAATGAAAACCACTCTACGATCTATGTAGAGGGTATTGGGGAAGTTCAAGTTGGAGTCCTTCGGCAGTATCCTCAAGTTCTCTCTCAGGCTTTCGACTTGAAAATGAGGATGACTGCCTATTGGAAAGTTGTTCTGGGAAGGCTTGTTGATTGTATGGCTTTGCATTTGCAGTTGAGTGTTTCGAAACTTGTGAACCAAGAGATGGAGAGTGAGATTGTGAATGAGTTGATGGGACCAAATTGTGGTGGTGGGATTGAGAAAATGCTGGAGGAATCTCCAGCAGTTGCCATCAAGCGCGAGAAGCTGATTAAGAGCATCAAAAAGCTCAGGGATTCCAAAGAGGTTGTTGCTAAGATCTTGGATGGTGTTGCTACCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000266 GO:0003674 GO:0003824 GO:0003924 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006996 GO:0007005 GO:0008017 GO:0008092 GO:0008150 GO:0009987 GO:0015631 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017111 GO:0044424 GO:0044464 GO:0048285 GO:0071840

KEGG Pathways

Metabolic & Signaling

ko04139 ko04214 ko04217 ko04621 ko04668 ko05162 ko05164 ko05165 map04139 map04214 map04217 map04621 map04668 map05162 map05164 map05165

Pfam Domains

Protein Families

Dynamin_M Dynamin_N GED

Protein Analysis

553

Amino Acids

60.89

Weight (kDa)

5.74

Isoelectric Point (pI)

43.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Dynamin_N	PF00350	66 - 239	1.9e-37	Dynamin family
Dynamin_M	PF01031	247 - 369	7.6e-27	Dynamin central region
GED	PF02212	457 - 546	7.2e-10	Dynamin GTPase effector domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0024571)

Species	Orthologous Gene IDs
prunus_persica	Prupe.7G015500_v2.0.a1
rosa_samantha	Rh2BG332800 Rh2DG351000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	299, 1139
Acc65I	GGTACC	1 cut(s)	289
AccB1I	GGYRCC	2 cut(s)	289, 724
AccB7I	CCANNNNNTGG	2 cut(s)	1486, 1526
AccII	CGCG	1 cut(s)	1581
AclWI	GGATC	1 cut(s)	1084
AcoI	YGGCCR	2 cut(s)	246, 1126
AcsI	RAATTY	4 cut(s)	438, 897, 927, 1101
AcuI	CTGAAG	1 cut(s)	615
AcvI	CACGTG	1 cut(s)	266
AcyI	GRCGYC	2 cut(s)	135, 725
AdeI	CACNNNGTG	1 cut(s)	671
AfaI	GTAC	2 cut(s)	291, 350
AfiI	CCNNNNNNNGG	3 cut(s)	533, 1486, 1526
AflIII	ACRYGT	1 cut(s)	1211
AgsI	TTSAA	8 cut(s)	83, 239, 311, 854, 932, 1012, 1331, 1384
AjnI	CCWGG	3 cut(s)	243, 284, 508
AjuI	GAANNNNNNNTTGG	2 cut(s)	1317, 1349
AloI	GAACNNNNNNTCC	4 cut(s)	321, 353, 888, 920
AluBI	AGCT	9 cut(s)	148, 184, 683, 935, 947, 988, 1124, 1588, 1609
AluI	AGCT	9 cut(s)	148, 184, 683, 935, 947, 988, 1124, 1588, 1609
Alw21I	GWGCWC	2 cut(s)	91, 369
AlwI	GGATC	1 cut(s)	1084
AoxI	GGCC	2 cut(s)	246, 1126
ApeKI	GCWGC	1 cut(s)	8
ApoI	RAATTY	4 cut(s)	438, 897, 927, 1101
ArsI	GACNNNNNNTTYG	2 cut(s)	1016, 1048
Asp700I	GAANNNNTTC	1 cut(s)	177
Asp718I	GGTACC	1 cut(s)	289
AspLEI	GCGC	2 cut(s)	727, 1581
AspS9I	GGNCC	1 cut(s)	1517
AsuHPI	GGTGA	5 cut(s)	56, 218, 400, 478, 698
AsuII	TTCGAA	1 cut(s)	1466
AvaII	GGWCC	1 cut(s)	1517
AxyI	CCTNAGG	1 cut(s)	543
BaeI	ACNNNNGTAYC	2 cut(s)	273, 306
BanI	GGYRCC	2 cut(s)	289, 724
BbrPI	CACGTG	1 cut(s)	266
BbsI	GAAGAC	1 cut(s)	45
Bbv12I	GWGCWC	2 cut(s)	91, 369
BbvI	GCAGC	1 cut(s)	20
BccI	CCATC	7 cut(s)	83, 662, 1168, 1480, 1507, 1580, 1640
BceAI	ACGGC	2 cut(s)	122, 1113
BciT130I	CCWGG	3 cut(s)	245, 286, 510
BciVI	GTATCC	2 cut(s)	1240, 1362
BclI	TGATCA	2 cut(s)	556, 573
BfaI	CTAG	4 cut(s)	321, 519, 939, 948
BfoI	RGCGCY	1 cut(s)	728
BfuI	GTATCC	2 cut(s)	1240, 1362
BglII	AGATCT	1 cut(s)	1638
BisI	GCNGC	1 cut(s)	9
BlsI	GCNGC	1 cut(s)	10
Bme1390I	CCNGG	3 cut(s)	245, 286, 510
Bme18I	GGWCC	1 cut(s)	1517
BmgT120I	GGNCC	1 cut(s)	1517
BmiI	GGNNCC	5 cut(s)	155, 291, 726, 797, 1518
BmrFI	CCNGG	3 cut(s)	245, 286, 510
BmsI	GCATC	4 cut(s)	261, 612, 1008, 1608
BpiI	GAAGAC	1 cut(s)	45
BpmI	CTGGAG	2 cut(s)	1545, 1571
Bpu10I	CCTNAGC	3 cut(s)	149, 1094, 1610
Bpu14I	TTCGAA	1 cut(s)	1466
BpuEI	CTTGAG	1 cut(s)	1341
BsaAI	YACGTR	1 cut(s)	266
BsaHI	GRCGYC	2 cut(s)	135, 725
BsaJI	CCNNGG	3 cut(s)	243, 285, 508
BsaWI	WCCGGW	1 cut(s)	798
Bsc4I	CCNNNNNNNGG	3 cut(s)	533, 1486, 1526
Bse118I	RCCGGY	1 cut(s)	248
Bse1I	ACTGG	2 cut(s)	340, 902
Bse21I	CCTNAGG	1 cut(s)	543
Bse3DI	GCAATG	1 cut(s)	384
BseBI	CCWGG	3 cut(s)	245, 286, 510
BseDI	CCNNGG	3 cut(s)	243, 285, 508
BseGI	GGATG	7 cut(s)	101, 666, 859, 1152, 1176, 1398, 1651
BseLI	CCNNNNNNNGG	3 cut(s)	533, 1486, 1526
BseMI	GCAATG	1 cut(s)	384
BseMII	CTCAG	5 cut(s)	163, 534, 980, 1382, 1624
BseNI	ACTGG	2 cut(s)	340, 902
BseRI	GAGGAG	1 cut(s)	836
BseXI	GCAGC	1 cut(s)	20
BsgI	GTGCAG	1 cut(s)	265
Bsh1236I	CGCG	1 cut(s)	1581
BshFI	GGCC	2 cut(s)	248, 1128
BshNI	GGYRCC	2 cut(s)	289, 724
BsiHKAI	GWGCWC	2 cut(s)	91, 369
BsiSI	CCGG	2 cut(s)	249, 799
BslFI	GGGAC	1 cut(s)	1530
BslI	CCNNNNNNNGG	3 cut(s)	533, 1486, 1526
BsmFI	GGGAC	1 cut(s)	1530
BsmI	GAATGC	1 cut(s)	177
BsnI	GGCC	2 cut(s)	248, 1128
Bsp119I	TTCGAA	1 cut(s)	1466
Bsp1286I	GDGCHC	2 cut(s)	91, 369
Bsp143I	GATC	7 cut(s)	502, 556, 573, 1068, 1076, 1302, 1638
BspANI	GGCC	2 cut(s)	248, 1128
BspCNI	CTCAG	5 cut(s)	162, 535, 981, 1381, 1623
BspFNI	CGCG	1 cut(s)	1581
BspLI	GGNNCC	5 cut(s)	155, 291, 726, 797, 1518
BspPI	GGATC	1 cut(s)	1084
BspQI	GCTCTTC	1 cut(s)	1114
BspT104I	TTCGAA	1 cut(s)	1466
BspT107I	GGYRCC	2 cut(s)	289, 724
BsrDI	GCAATG	1 cut(s)	384
BsrFI	RCCGGY	1 cut(s)	248
BsrI	ACTGG	2 cut(s)	340, 902
BssAI	RCCGGY	1 cut(s)	248
BssECI	CCNNGG	3 cut(s)	243, 285, 508
BssMI	GATC	7 cut(s)	502, 556, 573, 1068, 1076, 1302, 1638
BssNI	GRCGYC	2 cut(s)	135, 725
Bst2UI	CCWGG	3 cut(s)	245, 286, 510
Bst4CI	ACNGT	1 cut(s)	631
Bst6I	CTCTTC	2 cut(s)	591, 1114
BstACI	GRCGYC	2 cut(s)	135, 725
BstBAI	YACGTR	1 cut(s)	266
BstBI	TTCGAA	1 cut(s)	1466
BstC8I	GCNNGC	4 cut(s)	31, 250, 260, 1126
BstDEI	CTNAG	7 cut(s)	149, 543, 989, 1094, 1368, 1610, 1635
BstEII	GGTNACC	1 cut(s)	206
BstF5I	GGATG	7 cut(s)	101, 666, 859, 1152, 1176, 1398, 1651
BstFNI	CGCG	1 cut(s)	1581
BstH2I	RGCGCY	1 cut(s)	728
BstHHI	GCGC	2 cut(s)	727, 1581
BstKTI	GATC	7 cut(s)	505, 559, 576, 1071, 1079, 1305, 1641
BstMBI	GATC	7 cut(s)	502, 556, 573, 1068, 1076, 1302, 1638
BstMWI	GCNNNNNNNGC	2 cut(s)	228, 1585
BstNI	CCWGG	3 cut(s)	245, 286, 510
BstNSI	RCATGY	3 cut(s)	33, 74, 1215
BstPI	GGTNACC	1 cut(s)	206
BstSCI	CCNGG	3 cut(s)	243, 284, 508
BstUI	CGCG	1 cut(s)	1581
BstV1I	GCAGC	1 cut(s)	20
BstV2I	GAAGAC	1 cut(s)	45
BstX2I	RGATCY	1 cut(s)	1638
BstXI	CCANNNNNNTGG	1 cut(s)	218
BstYI	RGATCY	1 cut(s)	1638
Bsu36I	CCTNAGG	1 cut(s)	543
BsuI	GTATCC	2 cut(s)	1240, 1362
BsuRI	GGCC	2 cut(s)	248, 1128
BtsCI	GGATG	7 cut(s)	101, 666, 859, 1152, 1176, 1398, 1651
BtsIMutI	CAGTG	2 cut(s)	369, 1172
Cac8I	GCNNGC	4 cut(s)	31, 250, 260, 1126
CfoI	GCGC	2 cut(s)	727, 1581
Cfr10I	RCCGGY	1 cut(s)	248
Cfr13I	GGNCC	1 cut(s)	1517
CseI	GACGC	2 cut(s)	143, 220
Csp6I	GTAC	2 cut(s)	290, 349
CspCI	CAANNNNNGTGG	2 cut(s)	178, 213
CviAII	CATG	9 cut(s)	30, 57, 71, 160, 533, 571, 577, 1051, 1212
CviQI	GTAC	2 cut(s)	290, 349
DdeI	CTNAG	7 cut(s)	149, 543, 989, 1094, 1368, 1610, 1635
DinI	GGCGCC	1 cut(s)	726
DpnI	GATC	7 cut(s)	504, 558, 575, 1070, 1078, 1304, 1640
DpnII	GATC	7 cut(s)	502, 556, 573, 1068, 1076, 1302, 1638
DraIII	CACNNNGTG	1 cut(s)	671
EaeI	YGGCCR	2 cut(s)	246, 1126
Eam1104I	CTCTTC	2 cut(s)	591, 1114
EarI	CTCTTC	2 cut(s)	591, 1114
Eco32I	GATATC	1 cut(s)	550
Eco47I	GGWCC	1 cut(s)	1517
Eco57I	CTGAAG	1 cut(s)	615
Eco72I	CACGTG	1 cut(s)	266
Eco81I	CCTNAGG	1 cut(s)	543
Eco91I	GGTNACC	1 cut(s)	206
EcoO65I	GGTNACC	1 cut(s)	206
EcoRI	GAATTC	1 cut(s)	897
EcoRII	CCWGG	3 cut(s)	243, 284, 508
EcoRV	GATATC	1 cut(s)	550
EcoT22I	ATGCAT	2 cut(s)	35, 582
EgeI	GGCGCC	1 cut(s)	726
EheI	GGCGCC	1 cut(s)	726
FaeI	CATG	9 cut(s)	33, 60, 74, 163, 536, 574, 580, 1054, 1215
FalI	AAGNNNNNCTT	2 cut(s)	1077, 1109
FaqI	GGGAC	1 cut(s)	1530
FatI	CATG	9 cut(s)	29, 56, 70, 159, 532, 570, 576, 1050, 1211
FbaI	TGATCA	2 cut(s)	556, 573
Fnu4HI	GCNGC	1 cut(s)	9
FokI	GGATG	7 cut(s)	88, 673, 846, 1159, 1183, 1405, 1658
Fsp4HI	GCNGC	1 cut(s)	9
FspBI	CTAG	4 cut(s)	321, 519, 939, 948
GlaI	GCGC	2 cut(s)	726, 1580
GluI	GCNGC	1 cut(s)	9
GsuI	CTGGAG	2 cut(s)	1545, 1571
HaeII	RGCGCY	1 cut(s)	728
HaeIII	GGCC	2 cut(s)	248, 1128
HapII	CCGG	2 cut(s)	249, 799
HgaI	GACGC	2 cut(s)	143, 220
HhaI	GCGC	2 cut(s)	727, 1581
Hin1I	GRCGYC	2 cut(s)	135, 725
Hin1II	CATG	9 cut(s)	33, 60, 74, 163, 536, 574, 580, 1054, 1215
Hin6I	GCGC	2 cut(s)	725, 1579
HinP1I	GCGC	2 cut(s)	725, 1579
HincII	GTYRAC	3 cut(s)	142, 382, 1256
HindII	GTYRAC	3 cut(s)	142, 382, 1256
HindIII	AAGCTT	1 cut(s)	933
HinfI	GANTC	9 cut(s)	239, 457, 513, 650, 694, 1088, 1338, 1556, 1616
HpaII	CCGG	2 cut(s)	249, 799
HphI	GGTGA	5 cut(s)	56, 218, 400, 478, 698
Hpy166II	GTNNAC	5 cut(s)	142, 269, 382, 1256, 1477
Hpy188I	TCNGA	3 cut(s)	40, 1076, 1234
Hpy188III	TCNNGA	6 cut(s)	151, 326, 485, 658, 970, 1220
Hpy8I	GTNNAC	5 cut(s)	142, 269, 382, 1256, 1477
HpyAV	CCTTC	8 cut(s)	35, 41, 77, 167, 725, 739, 1352, 1416
HpyCH4III	ACNGT	1 cut(s)	631
HpyCH4IV	ACGT	2 cut(s)	265, 1058
HpyCH4V	TGCA	8 cut(s)	33, 282, 580, 925, 1066, 1113, 1447, 1453
HpyF10VI	GCNNNNNNNGC	2 cut(s)	228, 1585
HpyF3I	CTNAG	7 cut(s)	149, 543, 989, 1094, 1368, 1610, 1635
HpySE526I	ACGT	2 cut(s)	265, 1058
Hsp92I	GRCGYC	2 cut(s)	135, 725
Hsp92II	CATG	9 cut(s)	33, 60, 74, 163, 536, 574, 580, 1054, 1215
HspAI	GCGC	2 cut(s)	725, 1579
KasI	GGCGCC	1 cut(s)	724
KpnI	GGTACC	1 cut(s)	293
KroI	GCCGGC	1 cut(s)	248
KroNI	GCCGGC	1 cut(s)	250
Ksp22I	TGATCA	2 cut(s)	556, 573
Kzo9I	GATC	7 cut(s)	502, 556, 573, 1068, 1076, 1302, 1638
LguI	GCTCTTC	1 cut(s)	1114
LmnI	GCTCC	4 cut(s)	5, 86, 153, 189
Lsp1109I	GCAGC	1 cut(s)	20
LweI	GCATC	4 cut(s)	261, 612, 1008, 1608
MaeI	CTAG	4 cut(s)	321, 519, 939, 948
MaeII	ACGT	2 cut(s)	265, 1058
MaeIII	GTNAC	5 cut(s)	206, 406, 663, 706, 748
MalI	GATC	7 cut(s)	504, 558, 575, 1070, 1078, 1304, 1640
MboI	GATC	7 cut(s)	502, 556, 573, 1068, 1076, 1302, 1638
MboII	GAAGA	4 cut(s)	45, 608, 985, 1131
MflI	RGATCY	1 cut(s)	1638
MhlI	GDGCHC	2 cut(s)	91, 369
MluCI	AATT	5 cut(s)	438, 897, 927, 1101, 1522
Mly113I	GGCGCC	1 cut(s)	725
MlyI	GAGTC	3 cut(s)	451, 688, 1347
MmeI	TCCRAC	3 cut(s)	324, 874, 1315
Mph1103I	ATGCAT	2 cut(s)	35, 582
MroNI	GCCGGC	1 cut(s)	248
MroXI	GAANNNNTTC	1 cut(s)	177
MseI	TTAA	2 cut(s)	1283, 1593
MslI	CAYNNNNRTG	5 cut(s)	164, 372, 575, 659, 1061
MspI	CCGG	2 cut(s)	249, 799
MspR9I	CCNGG	3 cut(s)	245, 286, 510
Mva1269I	GAATGC	1 cut(s)	177
MvaI	CCWGG	3 cut(s)	245, 286, 510
MvnI	CGCG	1 cut(s)	1581
MwoI	GCNNNNNNNGC	2 cut(s)	228, 1585
NaeI	GCCGGC	1 cut(s)	250
NarI	GGCGCC	1 cut(s)	725
NdeII	GATC	7 cut(s)	502, 556, 573, 1068, 1076, 1302, 1638
NgoMIV	GCCGGC	1 cut(s)	248
NlaIII	CATG	9 cut(s)	33, 60, 74, 163, 536, 574, 580, 1054, 1215
NlaIV	GGNNCC	5 cut(s)	155, 291, 726, 797, 1518
NmuCI	GTSAC	4 cut(s)	206, 406, 663, 706
NsiI	ATGCAT	2 cut(s)	35, 582
NspI	RCATGY	3 cut(s)	33, 74, 1215
NspV	TTCGAA	1 cut(s)	1466
PaeI	GCATGC	1 cut(s)	33
PciI	ACATGT	1 cut(s)	1211
PciSI	GCTCTTC	1 cut(s)	1114
PctI	GAATGC	1 cut(s)	177
PdiI	GCCGGC	1 cut(s)	250
PdmI	GAANNNNTTC	1 cut(s)	177
PfeI	GAWTC	6 cut(s)	239, 513, 650, 1088, 1556, 1616
PflFI	GACNNNGTC	1 cut(s)	965
PflMI	CCANNNNNTGG	2 cut(s)	1486, 1526
PkrI	GCNGC	1 cut(s)	10
PleI	GAGTC	3 cut(s)	451, 688, 1346
PluTI	GGCGCC	1 cut(s)	728
PmaCI	CACGTG	1 cut(s)	266
PmlI	CACGTG	1 cut(s)	266
PpsI	GAGTC	3 cut(s)	451, 688, 1346
Ppu21I	YACGTR	1 cut(s)	266
PscI	ACATGT	1 cut(s)	1211
PsiI	TTATAA	2 cut(s)	299, 1139
Psp6I	CCWGG	3 cut(s)	243, 284, 508
PspCI	CACGTG	1 cut(s)	266
PspEI	GGTNACC	1 cut(s)	206
PspGI	CCWGG	3 cut(s)	243, 284, 508
PspN4I	GGNNCC	5 cut(s)	155, 291, 726, 797, 1518
PspPI	GGNCC	1 cut(s)	1517
PsuI	RGATCY	1 cut(s)	1638
PsyI	GACNNNGTC	1 cut(s)	965
RsaI	GTAC	2 cut(s)	291, 350
RsaNI	GTAC	2 cut(s)	290, 349
RseI	CAYNNNNRTG	5 cut(s)	164, 372, 575, 659, 1061
SapI	GCTCTTC	1 cut(s)	1114
SaqAI	TTAA	2 cut(s)	1283, 1593
SatI	GCNGC	1 cut(s)	9
Sau3AI	GATC	7 cut(s)	502, 556, 573, 1068, 1076, 1302, 1638
Sau96I	GGNCC	1 cut(s)	1517
SchI	GAGTC	3 cut(s)	451, 688, 1347
ScrFI	CCNGG	3 cut(s)	245, 286, 510
SduI	GDGCHC	2 cut(s)	91, 369
SfaNI	GCATC	4 cut(s)	261, 612, 1008, 1608
SfoI	GGCGCC	1 cut(s)	726
SfuI	TTCGAA	1 cut(s)	1466
SinI	GGWCC	1 cut(s)	1517
SmiMI	CAYNNNNRTG	5 cut(s)	164, 372, 575, 659, 1061
SmlI	CTYRAG	1 cut(s)	1356
SmoI	CTYRAG	1 cut(s)	1356
SphI	GCATGC	1 cut(s)	33
Sse9I	AATT	5 cut(s)	438, 897, 927, 1101, 1522
SspDI	GGCGCC	1 cut(s)	724
SspMI	CTAG	4 cut(s)	321, 519, 939, 948
StyD4I	CCNGG	3 cut(s)	243, 284, 508
TaaI	ACNGT	1 cut(s)	631
TaiI	ACGT	2 cut(s)	268, 1061
TaqI	TCGA	2 cut(s)	1377, 1466
TasI	AATT	5 cut(s)	438, 897, 927, 1101, 1522
TatI	WGTACW	1 cut(s)	348
TfiI	GAWTC	6 cut(s)	239, 513, 650, 1088, 1556, 1616
Tru1I	TTAA	2 cut(s)	1283, 1593
Tru9I	TTAA	2 cut(s)	1283, 1593
TscAI	CASTG	2 cut(s)	376, 1172
TseFI	GTSAC	4 cut(s)	206, 406, 663, 706
TseI	GCWGC	1 cut(s)	8
Tsp45I	GTSAC	4 cut(s)	206, 406, 663, 706
TspDTI	ATGAA	6 cut(s)	45, 126, 521, 825, 1163, 1302
TspGWI	ACGGA	1 cut(s)	110
TspRI	CASTG	2 cut(s)	376, 1172
Tth111I	GACNNNGTC	1 cut(s)	965
Van91I	CCANNNNNTGG	2 cut(s)	1486, 1526
VpaK11BI	GGWCC	1 cut(s)	1517
XapI	RAATTY	4 cut(s)	438, 897, 927, 1101
XceI	RCATGY	3 cut(s)	33, 74, 1215
XmnI	GAANNNNTTC	1 cut(s)	177
XspI	CTAG	4 cut(s)	321, 519, 939, 948
Zsp2I	ATGCAT	2 cut(s)	35, 582

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.