UDP-sugar transporter
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr3g0497301 |
| rosa_rugosa | Rorug05G0242900 |
| rosa_samantha | Rh2AG484800 Rh3AG335500 Rh4DG262000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 114 |
| AcsI | RAATTY | 2 cut(s) | 10, 88 |
| AfaI | GTAC | 2 cut(s) | 42, 230 |
| AgsI | TTSAA | 2 cut(s) | 124, 187 |
| AluBI | AGCT | 1 cut(s) | 244 |
| AluI | AGCT | 1 cut(s) | 244 |
| Alw26I | GTCTC | 1 cut(s) | 209 |
| AoxI | GGCC | 1 cut(s) | 166 |
| ApoI | RAATTY | 2 cut(s) | 10, 88 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 128 |
| AsuHPI | GGTGA | 1 cut(s) | 166 |
| AsuII | TTCGAA | 1 cut(s) | 8 |
| BcoDI | GTCTC | 1 cut(s) | 209 |
| BfaI | CTAG | 1 cut(s) | 222 |
| Bpu14I | TTCGAA | 1 cut(s) | 8 |
| Bse1I | ACTGG | 1 cut(s) | 48 |
| Bse3DI | GCAATG | 1 cut(s) | 206 |
| BseMI | GCAATG | 1 cut(s) | 206 |
| BseNI | ACTGG | 1 cut(s) | 48 |
| BseYI | CCCAGC | 1 cut(s) | 150 |
| BshFI | GGCC | 1 cut(s) | 168 |
| BsmAI | GTCTC | 1 cut(s) | 209 |
| BsmI | GAATGC | 1 cut(s) | 47 |
| BsnI | GGCC | 1 cut(s) | 168 |
| Bsp119I | TTCGAA | 1 cut(s) | 8 |
| BspACI | CCGC | 1 cut(s) | 114 |
| BspANI | GGCC | 1 cut(s) | 168 |
| BspT104I | TTCGAA | 1 cut(s) | 8 |
| BsrDI | GCAATG | 1 cut(s) | 206 |
| BsrI | ACTGG | 1 cut(s) | 48 |
| Bst4CI | ACNGT | 1 cut(s) | 65 |
| BstBI | TTCGAA | 1 cut(s) | 8 |
| BstMAI | GTCTC | 1 cut(s) | 209 |
| BsuRI | GGCC | 1 cut(s) | 168 |
| Csp6I | GTAC | 2 cut(s) | 41, 229 |
| CviJI | RGCY | 3 cut(s) | 150, 168, 244 |
| CviKI_1 | RGCY | 3 cut(s) | 150, 168, 244 |
| CviQI | GTAC | 2 cut(s) | 41, 229 |
| FaiI | YATR | 3 cut(s) | 68, 235, 248 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 116, 148 |
| FspBI | CTAG | 1 cut(s) | 222 |
| GsaI | CCCAGC | 1 cut(s) | 154 |
| HaeIII | GGCC | 1 cut(s) | 168 |
| HphI | GGTGA | 1 cut(s) | 166 |
| Hpy166II | GTNNAC | 1 cut(s) | 41 |
| Hpy188III | TCNNGA | 2 cut(s) | 55, 222 |
| Hpy8I | GTNNAC | 1 cut(s) | 41 |
| HpyAV | CCTTC | 2 cut(s) | 118, 179 |
| HpyCH4III | ACNGT | 1 cut(s) | 65 |
| LpnPI | CCDG | 4 cut(s) | 29, 49, 68, 136 |
| MaeI | CTAG | 1 cut(s) | 222 |
| MaeIII | GTNAC | 1 cut(s) | 116 |
| MboII | GAAGA | 1 cut(s) | 43 |
| MluCI | AATT | 5 cut(s) | 10, 58, 88, 108, 208 |
| MroXI | GAANNNNTTC | 1 cut(s) | 128 |
| MseI | TTAA | 1 cut(s) | 75 |
| Mva1269I | GAATGC | 1 cut(s) | 47 |
| NspV | TTCGAA | 1 cut(s) | 8 |
| PctI | GAATGC | 1 cut(s) | 47 |
| PdmI | GAANNNNTTC | 1 cut(s) | 128 |
| PspFI | CCCAGC | 1 cut(s) | 150 |
| RsaI | GTAC | 2 cut(s) | 42, 230 |
| RsaNI | GTAC | 2 cut(s) | 41, 229 |
| SaqAI | TTAA | 1 cut(s) | 75 |
| SetI | ASST | 1 cut(s) | 246 |
| SfuI | TTCGAA | 1 cut(s) | 8 |
| SgeI | CNNG | 9 cut(s) | 37, 48, 56, 67, 133, 158, 163, 227, 234 |
| Sse9I | AATT | 5 cut(s) | 10, 58, 88, 108, 208 |
| SsiI | CCGC | 1 cut(s) | 114 |
| SspMI | CTAG | 1 cut(s) | 222 |
| TaaI | ACNGT | 1 cut(s) | 65 |
| TaqI | TCGA | 1 cut(s) | 8 |
| TasI | AATT | 5 cut(s) | 10, 58, 88, 108, 208 |
| TatI | WGTACW | 1 cut(s) | 40 |
| Tru1I | TTAA | 1 cut(s) | 75 |
| Tru9I | TTAA | 1 cut(s) | 75 |
| XapI | RAATTY | 2 cut(s) | 10, 88 |
| XbaI | TCTAGA | 1 cut(s) | 221 |
| XmnI | GAANNNNTTC | 1 cut(s) | 128 |
| XspI | CTAG | 1 cut(s) | 222 |