Rh3BG101600

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
Physical Location & Seq
Reverse (-)
8104477 .. 8107828
3352 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG101600.1

Sequence Viewer

Length: 321 bp
ATGCAGGAGAACATTGATCCATCGAAGGCTAGACCTGGATCAGGTCATGGCAAGAGTAAGAGTGATAACCAGAAAGCAATTATTGCCGGGGGAGTTAGTGGTGGAATTGTCCTGGCCCTTGTCGTTGGTTTCTTTGCTATTTGCGTGTCACACCGCCGTAGACAACCGAAGGACTCAAGTGCAAGTGAAGGGCCATCTGGAGAAAATGTAATAATAGAGCAGAGGAGGTTTGAGCAATTGGACCATTTTGAGAGAAAAGCCATCAAGACAGAAGGACTCAATTTGGCTAAAATTGAAATAACAGCAAAAGAAAAGGAGTAA

Protein Analysis

106

Amino Acids

11.5

Weight (kDa)

9.2

Isoelectric Point (pI)

54.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0034115)

Species Orthologous Gene IDs
rosa_samantha Rh3BG101600 Rh3DG102900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 160
AciI CCGC 1 cut(s) 154
AclWI GGATC 2 cut(s) 11, 46
AfiI CCNNNNNNNGG 1 cut(s) 41
AgsI TTSAA 1 cut(s) 296
AjnI CCWGG 2 cut(s) 34, 111
AlwI GGATC 2 cut(s) 11, 46
AoxI GGCC 2 cut(s) 114, 191
AspS9I GGNCC 3 cut(s) 115, 191, 241
AsuC2I CCSGG 1 cut(s) 88
AvaII GGWCC 1 cut(s) 241
BccI CCATC 3 cut(s) 28, 202, 269
BceAI ACGGC 1 cut(s) 141
BciT130I CCWGG 2 cut(s) 36, 113
BcnI CCSGG 1 cut(s) 88
BfaI CTAG 1 cut(s) 30
Bme1390I CCNGG 3 cut(s) 36, 88, 113
Bme18I GGWCC 1 cut(s) 241
BmgT120I GGNCC 3 cut(s) 115, 191, 241
BmrFI CCNGG 3 cut(s) 36, 88, 113
BpmI CTGGAG 1 cut(s) 219
BpuEI CTTGAG 1 cut(s) 160
BpuMI CCSGG 1 cut(s) 88
BsaJI CCNNGG 1 cut(s) 87
BsaXI ACNNNNNCTCC 2 cut(s) 192, 222
Bsc4I CCNNNNNNNGG 1 cut(s) 41
BseBI CCWGG 2 cut(s) 36, 113
BseDI CCNNGG 1 cut(s) 87
BseLI CCNNNNNNNGG 1 cut(s) 41
BseRI GAGGAG 1 cut(s) 238
BshFI GGCC 2 cut(s) 116, 193
BsiSI CCGG 1 cut(s) 87
BslI CCNNNNNNNGG 1 cut(s) 41
BsnI GGCC 2 cut(s) 116, 193
Bsp143I GATC 2 cut(s) 16, 38
BspACI CCGC 1 cut(s) 154
BspANI GGCC 2 cut(s) 116, 193
BspPI GGATC 2 cut(s) 11, 46
BssECI CCNNGG 1 cut(s) 87
BssMI GATC 2 cut(s) 16, 38
Bst2UI CCWGG 2 cut(s) 36, 113
BstAPI GCANNNNNTGC 1 cut(s) 83
BstENI CCTNNNNNAGG 1 cut(s) 39
BstKTI GATC 2 cut(s) 19, 41
BstMBI GATC 2 cut(s) 16, 38
BstMWI GCNNNNNNNGC 1 cut(s) 83
BstNI CCWGG 2 cut(s) 36, 113
BstSCI CCNGG 3 cut(s) 34, 86, 111
BsuRI GGCC 2 cut(s) 116, 193
Cfr13I GGNCC 3 cut(s) 115, 191, 241
CviAII CATG 1 cut(s) 47
CviJI RGCY 5 cut(s) 29, 116, 193, 260, 287
CviKI_1 RGCY 5 cut(s) 29, 116, 193, 260, 287
DpnI GATC 2 cut(s) 18, 40
DpnII GATC 2 cut(s) 16, 38
Eco47I GGWCC 1 cut(s) 241
EcoNI CCTNNNNNAGG 1 cut(s) 39
EcoRII CCWGG 2 cut(s) 34, 111
FaeI CATG 1 cut(s) 50
FaiI YATR 1 cut(s) 48
FatI CATG 1 cut(s) 46
FblI GTMKAC 1 cut(s) 160
FspBI CTAG 1 cut(s) 30
GsuI CTGGAG 1 cut(s) 219
HaeIII GGCC 2 cut(s) 116, 193
HapII CCGG 1 cut(s) 87
Hin1II CATG 1 cut(s) 50
HinfI GANTC 2 cut(s) 173, 276
HpaII CCGG 1 cut(s) 87
Hpy166II GTNNAC 1 cut(s) 161
Hpy188III TCNNGA 2 cut(s) 198, 265
Hpy8I GTNNAC 1 cut(s) 161
HpyAV CCTTC 4 cut(s) 19, 163, 182, 266
HpyCH4V TGCA 2 cut(s) 4, 182
HpyF10VI GCNNNNNNNGC 1 cut(s) 83
Hsp92II CATG 1 cut(s) 50
Kzo9I GATC 2 cut(s) 16, 38
LpnPI CCDG 8 cut(s) 21, 27, 48, 83, 98, 100, 125, 183
MaeI CTAG 1 cut(s) 30
MaeIII GTNAC 1 cut(s) 147
MalI GATC 2 cut(s) 18, 40
MboI GATC 2 cut(s) 16, 38
MfeI CAATTG 1 cut(s) 236
MluCI AATT 5 cut(s) 78, 105, 236, 280, 291
MlyI GAGTC 2 cut(s) 167, 270
MnlI CCTC 2 cut(s) 216, 219
MspI CCGG 1 cut(s) 87
MspR9I CCNGG 3 cut(s) 36, 88, 113
MunI CAATTG 1 cut(s) 236
MvaI CCWGG 2 cut(s) 36, 113
MwoI GCNNNNNNNGC 1 cut(s) 83
NciI CCSGG 1 cut(s) 88
NdeII GATC 2 cut(s) 16, 38
NlaIII CATG 1 cut(s) 50
NmuCI GTSAC 1 cut(s) 147
PleI GAGTC 2 cut(s) 167, 270
PpsI GAGTC 2 cut(s) 167, 270
Psp6I CCWGG 2 cut(s) 34, 111
PspGI CCWGG 2 cut(s) 34, 111
PspPI GGNCC 3 cut(s) 115, 191, 241
Sau3AI GATC 2 cut(s) 16, 38
Sau96I GGNCC 3 cut(s) 115, 191, 241
SchI GAGTC 2 cut(s) 167, 270
ScrFI CCNGG 3 cut(s) 36, 88, 113
SetI ASST 3 cut(s) 37, 46, 230
SinI GGWCC 1 cut(s) 241
SmlI CTYRAG 1 cut(s) 175
SmoI CTYRAG 1 cut(s) 175
Sse9I AATT 5 cut(s) 78, 105, 236, 280, 291
SsiI CCGC 1 cut(s) 154
SspMI CTAG 1 cut(s) 30
StyD4I CCNGG 3 cut(s) 34, 86, 111
TaqI TCGA 1 cut(s) 23
TasI AATT 5 cut(s) 78, 105, 236, 280, 291
TseFI GTSAC 1 cut(s) 147
Tsp45I GTSAC 1 cut(s) 147
VpaK11BI GGWCC 1 cut(s) 241
XagI CCTNNNNNAGG 1 cut(s) 39
XmiI GTMKAC 1 cut(s) 160
XspI CTAG 1 cut(s) 30
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.