Rh3DG102900

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
Physical Location & Seq
Reverse (-)
8296886 .. 8299366
2481 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3DG102900.1

Sequence Viewer

Length: 291 bp
ATGCAGGAGAACATTGATCCATCTAAGGTTAGAACTGGATCAGGTCATGGCAAGAGTAAGAGTAATAACCAGAAAGCGATTATTGCCGGGGGAGTTAGTGGTGGAATTGTCTTGGCCCTTGTCCTTGGTTTCTTTGCCATTTGCGTGTCACGCCGCCGTAGACAACCGAAGGACTCAAGTGCAAGTGAAGGGCCATCTGGAGAAAATGTAATAATAGAGCAGAGGAGGTTTGAGCAATTGGACCATTTTGAGAGAAAAGCCATCAAGACAGAAAGGACTCAATTTGGCTAA

Protein Analysis

96

Amino Acids

10.51

Weight (kDa)

10.11

Isoelectric Point (pI)

57.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0034115)

Species Orthologous Gene IDs
rosa_samantha Rh3BG101600 Rh3DG102900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 160
AciI CCGC 1 cut(s) 154
AclWI GGATC 2 cut(s) 11, 46
AlwI GGATC 2 cut(s) 11, 46
AoxI GGCC 2 cut(s) 114, 191
AspS9I GGNCC 3 cut(s) 115, 191, 241
AsuC2I CCSGG 1 cut(s) 88
AvaII GGWCC 1 cut(s) 241
BccI CCATC 3 cut(s) 28, 202, 269
BceAI ACGGC 1 cut(s) 141
BcnI CCSGG 1 cut(s) 88
BisI GCNGC 1 cut(s) 154
BlsI GCNGC 1 cut(s) 155
Bme1390I CCNGG 1 cut(s) 88
Bme18I GGWCC 1 cut(s) 241
BmgT120I GGNCC 3 cut(s) 115, 191, 241
BmrFI CCNGG 1 cut(s) 88
BpmI CTGGAG 1 cut(s) 219
BpuEI CTTGAG 1 cut(s) 160
BpuMI CCSGG 1 cut(s) 88
BsaJI CCNNGG 2 cut(s) 87, 124
BsaXI ACNNNNNCTCC 2 cut(s) 192, 222
Bse1I ACTGG 1 cut(s) 40
BseDI CCNNGG 2 cut(s) 87, 124
BseNI ACTGG 1 cut(s) 40
BseRI GAGGAG 1 cut(s) 238
BshFI GGCC 2 cut(s) 116, 193
BsiSI CCGG 1 cut(s) 87
BsnI GGCC 2 cut(s) 116, 193
Bsp143I GATC 2 cut(s) 16, 38
BspACI CCGC 1 cut(s) 154
BspANI GGCC 2 cut(s) 116, 193
BspPI GGATC 2 cut(s) 11, 46
BsrI ACTGG 1 cut(s) 40
BssECI CCNNGG 2 cut(s) 87, 124
BssMI GATC 2 cut(s) 16, 38
BssT1I CCWWGG 1 cut(s) 124
BstDEI CTNAG 1 cut(s) 24
BstKTI GATC 2 cut(s) 19, 41
BstMBI GATC 2 cut(s) 16, 38
BstMWI GCNNNNNNNGC 2 cut(s) 83, 150
BstSCI CCNGG 1 cut(s) 86
BsuRI GGCC 2 cut(s) 116, 193
Cfr13I GGNCC 3 cut(s) 115, 191, 241
CviAII CATG 1 cut(s) 47
CviJI RGCY 4 cut(s) 116, 193, 260, 288
CviKI_1 RGCY 4 cut(s) 116, 193, 260, 288
DdeI CTNAG 1 cut(s) 24
DpnI GATC 2 cut(s) 18, 40
DpnII GATC 2 cut(s) 16, 38
Eco130I CCWWGG 1 cut(s) 124
Eco47I GGWCC 1 cut(s) 241
EcoT14I CCWWGG 1 cut(s) 124
ErhI CCWWGG 1 cut(s) 124
FaeI CATG 1 cut(s) 50
FaiI YATR 1 cut(s) 48
FatI CATG 1 cut(s) 46
FblI GTMKAC 1 cut(s) 160
Fnu4HI GCNGC 1 cut(s) 154
Fsp4HI GCNGC 1 cut(s) 154
GluI GCNGC 1 cut(s) 154
GsuI CTGGAG 1 cut(s) 219
HaeIII GGCC 2 cut(s) 116, 193
HapII CCGG 1 cut(s) 87
Hin1II CATG 1 cut(s) 50
HinfI GANTC 2 cut(s) 173, 277
HpaII CCGG 1 cut(s) 87
Hpy166II GTNNAC 1 cut(s) 161
Hpy188III TCNNGA 2 cut(s) 198, 265
Hpy8I GTNNAC 1 cut(s) 161
HpyAV CCTTC 2 cut(s) 163, 182
HpyCH4V TGCA 2 cut(s) 4, 182
HpyF10VI GCNNNNNNNGC 2 cut(s) 83, 150
HpyF3I CTNAG 1 cut(s) 24
Hsp92II CATG 1 cut(s) 50
Kzo9I GATC 2 cut(s) 16, 38
LpnPI CCDG 5 cut(s) 21, 27, 83, 100, 183
MaeIII GTNAC 1 cut(s) 147
MalI GATC 2 cut(s) 18, 40
MboI GATC 2 cut(s) 16, 38
MfeI CAATTG 1 cut(s) 236
MluCI AATT 3 cut(s) 105, 236, 281
MlyI GAGTC 2 cut(s) 167, 271
MnlI CCTC 2 cut(s) 216, 219
MslI CAYNNNNRTG 1 cut(s) 143
MspI CCGG 1 cut(s) 87
MspR9I CCNGG 1 cut(s) 88
MunI CAATTG 1 cut(s) 236
MwoI GCNNNNNNNGC 2 cut(s) 83, 150
NciI CCSGG 1 cut(s) 88
NdeII GATC 2 cut(s) 16, 38
NlaIII CATG 1 cut(s) 50
NmuCI GTSAC 1 cut(s) 147
PkrI GCNGC 1 cut(s) 155
PleI GAGTC 2 cut(s) 167, 271
PpsI GAGTC 2 cut(s) 167, 271
PspPI GGNCC 3 cut(s) 115, 191, 241
RseI CAYNNNNRTG 1 cut(s) 143
SatI GCNGC 1 cut(s) 154
Sau3AI GATC 2 cut(s) 16, 38
Sau96I GGNCC 3 cut(s) 115, 191, 241
SchI GAGTC 2 cut(s) 167, 271
ScrFI CCNGG 1 cut(s) 88
SetI ASST 3 cut(s) 30, 46, 230
SinI GGWCC 1 cut(s) 241
SmiMI CAYNNNNRTG 1 cut(s) 143
SmlI CTYRAG 1 cut(s) 175
SmoI CTYRAG 1 cut(s) 175
Sse9I AATT 3 cut(s) 105, 236, 281
SsiI CCGC 1 cut(s) 154
StyD4I CCNGG 1 cut(s) 86
StyI CCWWGG 1 cut(s) 124
TasI AATT 3 cut(s) 105, 236, 281
TauI GCSGC 1 cut(s) 156
TseFI GTSAC 1 cut(s) 147
Tsp45I GTSAC 1 cut(s) 147
VpaK11BI GGWCC 1 cut(s) 241
XmiI GTMKAC 1 cut(s) 160
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.