DNA RNA polymerases superfamily protein
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| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom01g13370 |
| rosa_chinensis | RchiOBHm_Chr2g0105641 |
| rosa_roxburghii | Rroxscaffold_7G00199100 |
| rosa_samantha | Rh3CG227300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 14, 297 |
| AcsI | RAATTY | 2 cut(s) | 80, 157 |
| AfaI | GTAC | 1 cut(s) | 270 |
| AgsI | TTSAA | 3 cut(s) | 86, 157, 197 |
| AjnI | CCWGG | 1 cut(s) | 201 |
| ApeKI | GCWGC | 2 cut(s) | 10, 47 |
| ApoI | RAATTY | 2 cut(s) | 80, 157 |
| AspS9I | GGNCC | 1 cut(s) | 145 |
| AsuHPI | GGTGA | 1 cut(s) | 221 |
| AvaII | GGWCC | 1 cut(s) | 145 |
| BbvI | GCAGC | 2 cut(s) | 22, 34 |
| BccI | CCATC | 2 cut(s) | 158, 181 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 118, 152 |
| BciT130I | CCWGG | 1 cut(s) | 203 |
| BfaI | CTAG | 1 cut(s) | 272 |
| BisI | GCNGC | 3 cut(s) | 11, 14, 48 |
| BlsI | GCNGC | 3 cut(s) | 12, 15, 49 |
| BmcAI | AGTACT | 1 cut(s) | 270 |
| Bme1390I | CCNGG | 1 cut(s) | 203 |
| Bme18I | GGWCC | 1 cut(s) | 145 |
| BmgT120I | GGNCC | 1 cut(s) | 145 |
| BmrFI | CCNGG | 1 cut(s) | 203 |
| BmsI | GCATC | 1 cut(s) | 255 |
| BseBI | CCWGG | 1 cut(s) | 203 |
| BseGI | GGATG | 1 cut(s) | 246 |
| BseRI | GAGGAG | 2 cut(s) | 38, 256 |
| BseXI | GCAGC | 2 cut(s) | 22, 34 |
| BspACI | CCGC | 2 cut(s) | 14, 297 |
| Bst2UI | CCWGG | 1 cut(s) | 203 |
| BstC8I | GCNNGC | 1 cut(s) | 297 |
| BstF5I | GGATG | 1 cut(s) | 246 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 292 |
| BstNI | CCWGG | 1 cut(s) | 203 |
| BstNSI | RCATGY | 1 cut(s) | 257 |
| BstSCI | CCNGG | 1 cut(s) | 201 |
| BstV1I | GCAGC | 2 cut(s) | 22, 34 |
| BtsCI | GGATG | 1 cut(s) | 246 |
| Cac8I | GCNNGC | 1 cut(s) | 297 |
| Cfr13I | GGNCC | 1 cut(s) | 145 |
| CsiI | ACCWGGT | 1 cut(s) | 201 |
| Csp6I | GTAC | 1 cut(s) | 269 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 210, 245 |
| CviAII | CATG | 1 cut(s) | 254 |
| CviJI | RGCY | 3 cut(s) | 13, 47, 281 |
| CviKI_1 | RGCY | 3 cut(s) | 13, 47, 281 |
| CviQI | GTAC | 1 cut(s) | 269 |
| Eco47I | GGWCC | 1 cut(s) | 145 |
| EcoRII | CCWGG | 1 cut(s) | 201 |
| FaeI | CATG | 1 cut(s) | 257 |
| FaiI | YATR | 6 cut(s) | 180, 182, 255, 266, 301, 303 |
| FatI | CATG | 1 cut(s) | 253 |
| FauI | CCCGC | 1 cut(s) | 304 |
| FauNDI | CATATG | 1 cut(s) | 180 |
| Fnu4HI | GCNGC | 3 cut(s) | 11, 14, 48 |
| FokI | GGATG | 1 cut(s) | 233 |
| Fsp4HI | GCNGC | 3 cut(s) | 11, 14, 48 |
| FspBI | CTAG | 1 cut(s) | 272 |
| GluI | GCNGC | 3 cut(s) | 11, 14, 48 |
| Hin1II | CATG | 1 cut(s) | 257 |
| HinfI | GANTC | 1 cut(s) | 26 |
| HphI | GGTGA | 1 cut(s) | 221 |
| Hpy188III | TCNNGA | 4 cut(s) | 67, 77, 98, 197 |
| HpyAV | CCTTC | 1 cut(s) | 37 |
| HpyCH4V | TGCA | 4 cut(s) | 10, 92, 119, 139 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 292 |
| Hsp92II | CATG | 1 cut(s) | 257 |
| LmnI | GCTCC | 1 cut(s) | 243 |
| LpnPI | CCDG | 4 cut(s) | 57, 188, 215, 263 |
| Lsp1109I | GCAGC | 2 cut(s) | 22, 34 |
| LweI | GCATC | 1 cut(s) | 255 |
| MabI | ACCWGGT | 1 cut(s) | 201 |
| MaeI | CTAG | 1 cut(s) | 272 |
| MaeIII | GTNAC | 1 cut(s) | 124 |
| MluCI | AATT | 2 cut(s) | 80, 157 |
| MlyI | GAGTC | 1 cut(s) | 35 |
| MnlI | CCTC | 3 cut(s) | 16, 136, 234 |
| MseI | TTAA | 1 cut(s) | 18 |
| MspR9I | CCNGG | 1 cut(s) | 203 |
| MvaI | CCWGG | 1 cut(s) | 203 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 292 |
| NdeI | CATATG | 1 cut(s) | 180 |
| NlaIII | CATG | 1 cut(s) | 257 |
| NspI | RCATGY | 1 cut(s) | 257 |
| PkrI | GCNGC | 3 cut(s) | 12, 15, 49 |
| PleI | GAGTC | 1 cut(s) | 34 |
| PpsI | GAGTC | 1 cut(s) | 34 |
| Psp6I | CCWGG | 1 cut(s) | 201 |
| PspGI | CCWGG | 1 cut(s) | 201 |
| PspPI | GGNCC | 1 cut(s) | 145 |
| RsaI | GTAC | 1 cut(s) | 270 |
| RsaNI | GTAC | 1 cut(s) | 269 |
| SaqAI | TTAA | 1 cut(s) | 18 |
| SatI | GCNGC | 3 cut(s) | 11, 14, 48 |
| Sau96I | GGNCC | 1 cut(s) | 145 |
| ScaI | AGTACT | 1 cut(s) | 270 |
| SchI | GAGTC | 1 cut(s) | 35 |
| ScrFI | CCNGG | 1 cut(s) | 203 |
| SetI | ASST | 3 cut(s) | 76, 204, 277 |
| SexAI | ACCWGGT | 1 cut(s) | 201 |
| SfaNI | GCATC | 1 cut(s) | 255 |
| SinI | GGWCC | 1 cut(s) | 145 |
| Sse9I | AATT | 2 cut(s) | 80, 157 |
| SsiI | CCGC | 2 cut(s) | 14, 297 |
| SspMI | CTAG | 1 cut(s) | 272 |
| StyD4I | CCNGG | 1 cut(s) | 201 |
| TaqI | TCGA | 1 cut(s) | 29 |
| TasI | AATT | 2 cut(s) | 80, 157 |
| TatI | WGTACW | 1 cut(s) | 268 |
| TauI | GCSGC | 1 cut(s) | 16 |
| Tru1I | TTAA | 1 cut(s) | 18 |
| Tru9I | TTAA | 1 cut(s) | 18 |
| TseI | GCWGC | 2 cut(s) | 10, 47 |
| TspDTI | ATGAA | 2 cut(s) | 160, 228 |
| VpaK11BI | GGWCC | 1 cut(s) | 145 |
| XapI | RAATTY | 2 cut(s) | 80, 157 |
| XceI | RCATGY | 1 cut(s) | 257 |
| XspI | CTAG | 1 cut(s) | 272 |
| ZrmI | AGTACT | 1 cut(s) | 270 |