Rh3CG356900

COP9 signalosome complex subunit 7-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
Physical Location & Seq
Reverse (-)
43793872 .. 43796709
2838 bp
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UTR
Exon/CDS
Intron
Rh3CG356900.1

Sequence Viewer

Length: 186 bp
ATGACACTGGACTTTTTTGTGCAACTTAAAGGAACAGGGAATGTTGTGTACCTGGATGTGCTTCGTTTGTTTGCACACGGCACATGGAGTGATTACAGGAAGCCTTGGGGAGAGCGAGGTATACCCCGAACTCCATGGTGTCTTACCGTCTTTGAATATCCCTATCTTTACTCACTCTTGCCTTAA

Protein Analysis

61

Amino Acids

7.23

Weight (kDa)

7.89

Isoelectric Point (pI)

-7.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0024681)

Species Orthologous Gene IDs
pyrus_communis pycom11g18120
rosa_chinensis RchiOBHm_Chr1g0347731
rosa_samantha Rh3CG356900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 121
AfaI GTAC 1 cut(s) 50
AgsI TTSAA 1 cut(s) 155
AjnI CCWGG 1 cut(s) 51
BceAI ACGGC 1 cut(s) 94
BciT130I CCWGG 1 cut(s) 53
Bme1390I CCNGG 1 cut(s) 53
BmrFI CCNGG 1 cut(s) 53
BsaJI CCNNGG 2 cut(s) 104, 134
Bse1I ACTGG 1 cut(s) 12
BseBI CCWGG 1 cut(s) 53
BseDI CCNNGG 2 cut(s) 104, 134
BseGI GGATG 1 cut(s) 61
BseNI ACTGG 1 cut(s) 12
Bsp19I CCATGG 1 cut(s) 134
BsrI ACTGG 1 cut(s) 12
BssECI CCNNGG 2 cut(s) 104, 134
BssNAI GTATAC 1 cut(s) 122
BssT1I CCWWGG 2 cut(s) 104, 134
Bst1107I GTATAC 1 cut(s) 122
Bst2UI CCWGG 1 cut(s) 53
Bst4CI ACNGT 1 cut(s) 148
BstDSI CCRYGG 1 cut(s) 134
BstF5I GGATG 1 cut(s) 61
BstNI CCWGG 1 cut(s) 53
BstSCI CCNGG 1 cut(s) 51
BstZ17I GTATAC 1 cut(s) 122
BtgI CCRYGG 1 cut(s) 134
BtsCI GGATG 1 cut(s) 61
BtsIMutI CAGTG 1 cut(s) 5
Csp6I GTAC 1 cut(s) 49
CviAII CATG 2 cut(s) 84, 135
CviJI RGCY 1 cut(s) 103
CviKI_1 RGCY 1 cut(s) 103
CviQI GTAC 1 cut(s) 49
Eco130I CCWWGG 2 cut(s) 104, 134
EcoRII CCWGG 1 cut(s) 51
EcoT14I CCWWGG 2 cut(s) 104, 134
ErhI CCWWGG 2 cut(s) 104, 134
FaeI CATG 2 cut(s) 87, 138
FaiI YATR 3 cut(s) 85, 122, 136
FatI CATG 2 cut(s) 83, 134
FblI GTMKAC 1 cut(s) 121
FokI GGATG 1 cut(s) 68
Hin1II CATG 2 cut(s) 87, 138
Hpy166II GTNNAC 2 cut(s) 49, 122
Hpy8I GTNNAC 2 cut(s) 49, 122
HpyCH4III ACNGT 1 cut(s) 148
HpyCH4V TGCA 2 cut(s) 22, 74
Hsp92II CATG 2 cut(s) 87, 138
LpnPI CCDG 4 cut(s) 21, 38, 65, 82
MnlI CCTC 1 cut(s) 110
MseI TTAA 2 cut(s) 27, 184
MspR9I CCNGG 1 cut(s) 53
MvaI CCWGG 1 cut(s) 53
NcoI CCATGG 1 cut(s) 134
NlaIII CATG 2 cut(s) 87, 138
Psp6I CCWGG 1 cut(s) 51
PspGI CCWGG 1 cut(s) 51
RsaI GTAC 1 cut(s) 50
RsaNI GTAC 1 cut(s) 49
SaqAI TTAA 2 cut(s) 27, 184
ScrFI CCNGG 1 cut(s) 53
SetI ASST 2 cut(s) 54, 121
StyD4I CCNGG 1 cut(s) 51
StyI CCWWGG 2 cut(s) 104, 134
TaaI ACNGT 1 cut(s) 148
Tru1I TTAA 2 cut(s) 27, 184
Tru9I TTAA 2 cut(s) 27, 184
TscAI CASTG 1 cut(s) 12
TspRI CASTG 1 cut(s) 12
XmiI GTMKAC 1 cut(s) 121
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.