AT-rich interactive domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr3g0456051 |
| rosa_roxburghii | Rroxscaffold_2G00113030 Rroxscaffold_3G00272120 Rroxscaffold_7G00172370 |
| rosa_rugosa | Rorug05G0468100 |
| rosa_samantha | Rh4BG009500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 111 |
| AccB1I | GGYRCC | 1 cut(s) | 111 |
| AciI | CCGC | 2 cut(s) | 139, 231 |
| AclWI | GGATC | 1 cut(s) | 208 |
| AcsI | RAATTY | 1 cut(s) | 51 |
| AcuI | CTGAAG | 1 cut(s) | 164 |
| AfaI | GTAC | 2 cut(s) | 113, 186 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 181 |
| AflIII | ACRYGT | 1 cut(s) | 34 |
| AgsI | TTSAA | 1 cut(s) | 13 |
| AluBI | AGCT | 1 cut(s) | 178 |
| AluI | AGCT | 1 cut(s) | 178 |
| Alw26I | GTCTC | 1 cut(s) | 61 |
| AlwI | GGATC | 1 cut(s) | 208 |
| ApoI | RAATTY | 1 cut(s) | 51 |
| Asp718I | GGTACC | 1 cut(s) | 111 |
| AsuII | TTCGAA | 1 cut(s) | 95 |
| BanI | GGYRCC | 1 cut(s) | 111 |
| BcoDI | GTCTC | 1 cut(s) | 61 |
| BmiI | GGNNCC | 1 cut(s) | 113 |
| BmsI | GCATC | 1 cut(s) | 11 |
| Bpu14I | TTCGAA | 1 cut(s) | 95 |
| BsaJI | CCNNGG | 1 cut(s) | 26 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 133, 163 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 181 |
| Bse3DI | GCAATG | 1 cut(s) | 266 |
| BseDI | CCNNGG | 1 cut(s) | 26 |
| BseGI | GGATG | 1 cut(s) | 26 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 181 |
| BseMI | GCAATG | 1 cut(s) | 266 |
| BshNI | GGYRCC | 1 cut(s) | 111 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 181 |
| BsmAI | GTCTC | 1 cut(s) | 61 |
| Bsp119I | TTCGAA | 1 cut(s) | 95 |
| Bsp143I | GATC | 1 cut(s) | 200 |
| BspACI | CCGC | 2 cut(s) | 139, 231 |
| BspLI | GGNNCC | 1 cut(s) | 113 |
| BspPI | GGATC | 1 cut(s) | 208 |
| BspT104I | TTCGAA | 1 cut(s) | 95 |
| BspT107I | GGYRCC | 1 cut(s) | 111 |
| BsrDI | GCAATG | 1 cut(s) | 266 |
| BssECI | CCNNGG | 1 cut(s) | 26 |
| BssMI | GATC | 1 cut(s) | 200 |
| BssT1I | CCWWGG | 1 cut(s) | 26 |
| Bst4CI | ACNGT | 2 cut(s) | 149, 168 |
| Bst6I | CTCTTC | 1 cut(s) | 260 |
| BstBI | TTCGAA | 1 cut(s) | 95 |
| BstF5I | GGATG | 1 cut(s) | 26 |
| BstKTI | GATC | 1 cut(s) | 203 |
| BstMAI | GTCTC | 1 cut(s) | 61 |
| BstMBI | GATC | 1 cut(s) | 200 |
| BstNSI | RCATGY | 1 cut(s) | 38 |
| BstX2I | RGATCY | 1 cut(s) | 200 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 122 |
| BstYI | RGATCY | 1 cut(s) | 200 |
| BtsCI | GGATG | 1 cut(s) | 26 |
| BtsIMutI | CAGTG | 2 cut(s) | 154, 164 |
| Csp6I | GTAC | 2 cut(s) | 112, 185 |
| CviAII | CATG | 2 cut(s) | 35, 218 |
| CviJI | RGCY | 2 cut(s) | 106, 178 |
| CviKI_1 | RGCY | 2 cut(s) | 106, 178 |
| CviQI | GTAC | 2 cut(s) | 112, 185 |
| DpnI | GATC | 1 cut(s) | 202 |
| DpnII | GATC | 1 cut(s) | 200 |
| Eam1104I | CTCTTC | 1 cut(s) | 260 |
| EarI | CTCTTC | 1 cut(s) | 260 |
| EciI | GGCGGA | 2 cut(s) | 154, 246 |
| Eco130I | CCWWGG | 1 cut(s) | 26 |
| Eco57I | CTGAAG | 1 cut(s) | 164 |
| EcoT14I | CCWWGG | 1 cut(s) | 26 |
| EcoT22I | ATGCAT | 1 cut(s) | 283 |
| ErhI | CCWWGG | 1 cut(s) | 26 |
| FaeI | CATG | 2 cut(s) | 38, 221 |
| FaiI | YATR | 8 cut(s) | 36, 72, 84, 109, 209, 219, 279, 283 |
| FatI | CATG | 2 cut(s) | 34, 217 |
| FokI | GGATG | 1 cut(s) | 33 |
| Hin1II | CATG | 2 cut(s) | 38, 221 |
| HinfI | GANTC | 1 cut(s) | 193 |
| Hpy166II | GTNNAC | 1 cut(s) | 161 |
| Hpy188I | TCNGA | 3 cut(s) | 50, 205, 293 |
| Hpy8I | GTNNAC | 1 cut(s) | 161 |
| HpyCH4III | ACNGT | 2 cut(s) | 149, 168 |
| HpyCH4V | TGCA | 1 cut(s) | 281 |
| Hsp92II | CATG | 2 cut(s) | 38, 221 |
| KpnI | GGTACC | 1 cut(s) | 115 |
| Kzo9I | GATC | 1 cut(s) | 200 |
| LmnI | GCTCC | 1 cut(s) | 141 |
| LpnPI | CCDG | 3 cut(s) | 167, 188, 213 |
| LweI | GCATC | 1 cut(s) | 11 |
| MaeIII | GTNAC | 1 cut(s) | 149 |
| MalI | GATC | 1 cut(s) | 202 |
| MboI | GATC | 1 cut(s) | 200 |
| MboII | GAAGA | 1 cut(s) | 277 |
| MflI | RGATCY | 1 cut(s) | 200 |
| MluCI | AATT | 2 cut(s) | 51, 120 |
| MnlI | CCTC | 1 cut(s) | 96 |
| Mph1103I | ATGCAT | 1 cut(s) | 283 |
| MseI | TTAA | 1 cut(s) | 212 |
| NdeII | GATC | 1 cut(s) | 200 |
| NlaIII | CATG | 2 cut(s) | 38, 221 |
| NlaIV | GGNNCC | 1 cut(s) | 113 |
| NmuCI | GTSAC | 1 cut(s) | 149 |
| NsiI | ATGCAT | 1 cut(s) | 283 |
| NspI | RCATGY | 1 cut(s) | 38 |
| NspV | TTCGAA | 1 cut(s) | 95 |
| PciI | ACATGT | 1 cut(s) | 34 |
| PfeI | GAWTC | 1 cut(s) | 193 |
| PscI | ACATGT | 1 cut(s) | 34 |
| PspN4I | GGNNCC | 1 cut(s) | 113 |
| PsuI | RGATCY | 1 cut(s) | 200 |
| RsaI | GTAC | 2 cut(s) | 113, 186 |
| RsaNI | GTAC | 2 cut(s) | 112, 185 |
| SaqAI | TTAA | 1 cut(s) | 212 |
| Sau3AI | GATC | 1 cut(s) | 200 |
| SetI | ASST | 3 cut(s) | 180, 186, 277 |
| SfaNI | GCATC | 1 cut(s) | 11 |
| SfuI | TTCGAA | 1 cut(s) | 95 |
| SgeI | CNNG | 9 cut(s) | 25, 39, 47, 140, 187, 194, 209, 230, 240 |
| Sse9I | AATT | 2 cut(s) | 51, 120 |
| SsiI | CCGC | 2 cut(s) | 139, 231 |
| StyI | CCWWGG | 1 cut(s) | 26 |
| TaaI | ACNGT | 2 cut(s) | 149, 168 |
| TaqI | TCGA | 1 cut(s) | 95 |
| TasI | AATT | 2 cut(s) | 51, 120 |
| TfiI | GAWTC | 1 cut(s) | 193 |
| Tru1I | TTAA | 1 cut(s) | 212 |
| Tru9I | TTAA | 1 cut(s) | 212 |
| TscAI | CASTG | 2 cut(s) | 154, 171 |
| TseFI | GTSAC | 1 cut(s) | 149 |
| Tsp45I | GTSAC | 1 cut(s) | 149 |
| TspGWI | ACGGA | 1 cut(s) | 213 |
| TspRI | CASTG | 2 cut(s) | 154, 171 |
| XapI | RAATTY | 1 cut(s) | 51 |
| XceI | RCATGY | 1 cut(s) | 38 |
| Zsp2I | ATGCAT | 1 cut(s) | 283 |