Rh4CG039300
TCP Family

assists the folding of proteins upon ATP hydrolysis

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
Physical Location & Seq
Forward (+)
8017047 .. 8017863
817 bp
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UTR
Exon/CDS
Intron
Rh4CG039300.1

Sequence Viewer

Length: 201 bp
ATGAATTTGCTCTATCTCTGCAGTAACTTGGAGAAGAACAAGCTCAAATGGTTCACTTTCGATCTCTTGGTCATGATAATTTCAATGCTTTTCATTGTCAGGCAGTGTGGAATGATAGCCCATATTCTTCCTGGAACTGCAGCTACTGAAATAGAGTTAGCTAGGAGGGTGAAGGAATTCTCCTTGAAAGAAAGAGGGTAA

Protein Analysis

66

Amino Acids

7.66

Weight (kDa)

9.18

Isoelectric Point (pI)

43.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0034644)

Species Orthologous Gene IDs
rosa_samantha Rh2CG420800 Rh4CG039300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 2 cut(s) 4, 176
AgsI TTSAA 2 cut(s) 84, 187
AjnI CCWGG 1 cut(s) 130
AluBI AGCT 3 cut(s) 43, 143, 161
AluI AGCT 3 cut(s) 43, 143, 161
AlwNI CAGNNNCTG 1 cut(s) 146
ApeKI GCWGC 1 cut(s) 140
ApoI RAATTY 2 cut(s) 4, 176
Asp700I GAANNNNTTC 1 cut(s) 176
AsuHPI GGTGA 1 cut(s) 181
BbvI GCAGC 1 cut(s) 152
BciT130I CCWGG 1 cut(s) 132
BfaI CTAG 1 cut(s) 162
BfmI CTRYAG 2 cut(s) 19, 138
BisI GCNGC 1 cut(s) 141
BlsI GCNGC 1 cut(s) 142
Bme1390I CCNGG 1 cut(s) 132
BmrFI CCNGG 1 cut(s) 132
BseBI CCWGG 1 cut(s) 132
BseXI GCAGC 1 cut(s) 152
Bsp143I GATC 1 cut(s) 61
BspHI TCATGA 1 cut(s) 72
BspMAI CTGCAG 2 cut(s) 23, 142
BssMI GATC 1 cut(s) 61
Bst2UI CCWGG 1 cut(s) 132
BstKTI GATC 1 cut(s) 64
BstMBI GATC 1 cut(s) 61
BstNI CCWGG 1 cut(s) 132
BstSCI CCNGG 1 cut(s) 130
BstSFI CTRYAG 2 cut(s) 19, 138
BstV1I GCAGC 1 cut(s) 152
BtsI GCAGTG 1 cut(s) 110
BtsIMutI CAGTG 1 cut(s) 110
CaiI CAGNNNCTG 1 cut(s) 146
CciI TCATGA 1 cut(s) 72
CviAII CATG 1 cut(s) 73
CviJI RGCY 4 cut(s) 43, 119, 143, 161
CviKI_1 RGCY 4 cut(s) 43, 119, 143, 161
DpnI GATC 1 cut(s) 63
DpnII GATC 1 cut(s) 61
EcoRI GAATTC 1 cut(s) 176
EcoRII CCWGG 1 cut(s) 130
FaeI CATG 1 cut(s) 76
FaiI YATR 2 cut(s) 74, 123
FatI CATG 1 cut(s) 72
Fnu4HI GCNGC 1 cut(s) 141
Fsp4HI GCNGC 1 cut(s) 141
FspBI CTAG 1 cut(s) 162
GluI GCNGC 1 cut(s) 141
Hin1II CATG 1 cut(s) 76
HphI GGTGA 1 cut(s) 181
Hpy166II GTNNAC 1 cut(s) 54
Hpy188III TCNNGA 1 cut(s) 73
Hpy8I GTNNAC 1 cut(s) 54
HpyAV CCTTC 1 cut(s) 166
HpyCH4V TGCA 2 cut(s) 21, 140
Hsp92II CATG 1 cut(s) 76
Kzo9I GATC 1 cut(s) 61
LpnPI CCDG 3 cut(s) 85, 117, 144
Lsp1109I GCAGC 1 cut(s) 152
MaeI CTAG 1 cut(s) 162
MaeIII GTNAC 1 cut(s) 23
MalI GATC 1 cut(s) 63
MboI GATC 1 cut(s) 61
MboII GAAGA 2 cut(s) 46, 119
MluCI AATT 3 cut(s) 4, 78, 176
MnlI CCTC 2 cut(s) 159, 188
MroXI GAANNNNTTC 1 cut(s) 176
MspR9I CCNGG 1 cut(s) 132
MvaI CCWGG 1 cut(s) 132
NdeII GATC 1 cut(s) 61
NlaIII CATG 1 cut(s) 76
PagI TCATGA 1 cut(s) 72
PdmI GAANNNNTTC 1 cut(s) 176
PfoI TCCNGGA 1 cut(s) 130
PkrI GCNGC 1 cut(s) 142
Psp6I CCWGG 1 cut(s) 130
PspGI CCWGG 1 cut(s) 130
PsrI GAACNNNNNNTAC 2 cut(s) 127, 159
PstI CTGCAG 2 cut(s) 23, 142
PstNI CAGNNNCTG 1 cut(s) 146
SatI GCNGC 1 cut(s) 141
Sau3AI GATC 1 cut(s) 61
ScrFI CCNGG 1 cut(s) 132
SetI ASST 3 cut(s) 45, 145, 163
SfcI CTRYAG 2 cut(s) 19, 138
SgeI CNNG 9 cut(s) 40, 52, 79, 85, 112, 143, 144, 174, 196
Sse9I AATT 3 cut(s) 4, 78, 176
SspMI CTAG 1 cut(s) 162
StyD4I CCNGG 1 cut(s) 130
TaqI TCGA 1 cut(s) 60
TasI AATT 3 cut(s) 4, 78, 176
TscAI CASTG 1 cut(s) 110
TseI GCWGC 1 cut(s) 140
TspDTI ATGAA 2 cut(s) 17, 82
TspRI CASTG 1 cut(s) 110
XapI RAATTY 2 cut(s) 4, 176
XcmI CCANNNNNNNNNTGG 1 cut(s) 128
XmnI GAANNNNTTC 1 cut(s) 176
XspI CTAG 1 cut(s) 162
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.