RNA recognition motif
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0099481 RchiOBHm_Chr5g0042331 |
| rosa_samantha | Rh5AG285500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 3 cut(s) | 50, 129, 134 |
| AgsI | TTSAA | 1 cut(s) | 149 |
| AlwI | GGATC | 3 cut(s) | 50, 129, 134 |
| AoxI | GGCC | 1 cut(s) | 3 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 80, 112 |
| AspLEI | GCGC | 1 cut(s) | 53 |
| BccI | CCATC | 1 cut(s) | 112 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 47, 81 |
| BmsI | GCATC | 1 cut(s) | 55 |
| BshFI | GGCC | 1 cut(s) | 5 |
| BsnI | GGCC | 1 cut(s) | 5 |
| Bsp143I | GATC | 5 cut(s) | 42, 80, 112, 121, 126 |
| BspANI | GGCC | 1 cut(s) | 5 |
| BspPI | GGATC | 3 cut(s) | 50, 129, 134 |
| BssMI | GATC | 5 cut(s) | 42, 80, 112, 121, 126 |
| BstC8I | GCNNGC | 1 cut(s) | 49 |
| BstHHI | GCGC | 1 cut(s) | 53 |
| BstKTI | GATC | 5 cut(s) | 45, 83, 115, 124, 129 |
| BstMBI | GATC | 5 cut(s) | 42, 80, 112, 121, 126 |
| BstX2I | RGATCY | 1 cut(s) | 126 |
| BstYI | RGATCY | 1 cut(s) | 126 |
| BsuRI | GGCC | 1 cut(s) | 5 |
| Cac8I | GCNNGC | 1 cut(s) | 49 |
| CfoI | GCGC | 1 cut(s) | 53 |
| CviJI | RGCY | 1 cut(s) | 5 |
| CviKI_1 | RGCY | 1 cut(s) | 5 |
| DpnI | GATC | 5 cut(s) | 44, 82, 114, 123, 128 |
| DpnII | GATC | 5 cut(s) | 42, 80, 112, 121, 126 |
| GlaI | GCGC | 1 cut(s) | 52 |
| HaeIII | GGCC | 1 cut(s) | 5 |
| HhaI | GCGC | 1 cut(s) | 53 |
| Hin6I | GCGC | 1 cut(s) | 51 |
| HinP1I | GCGC | 1 cut(s) | 51 |
| HinfI | GANTC | 1 cut(s) | 88 |
| Hpy188I | TCNGA | 3 cut(s) | 38, 117, 126 |
| Hpy99I | CGWCG | 1 cut(s) | 38 |
| HpyAV | CCTTC | 1 cut(s) | 87 |
| HpyCH4V | TGCA | 1 cut(s) | 68 |
| HspAI | GCGC | 1 cut(s) | 51 |
| Kzo9I | GATC | 5 cut(s) | 42, 80, 112, 121, 126 |
| LpnPI | CCDG | 1 cut(s) | 61 |
| LweI | GCATC | 1 cut(s) | 55 |
| MalI | GATC | 5 cut(s) | 44, 82, 114, 123, 128 |
| MboI | GATC | 5 cut(s) | 42, 80, 112, 121, 126 |
| MflI | RGATCY | 1 cut(s) | 126 |
| MmeI | TCCRAC | 1 cut(s) | 16 |
| MnlI | CCTC | 2 cut(s) | 16, 32 |
| NdeII | GATC | 5 cut(s) | 42, 80, 112, 121, 126 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 69 |
| PfeI | GAWTC | 1 cut(s) | 88 |
| PsuI | RGATCY | 1 cut(s) | 126 |
| Sau3AI | GATC | 5 cut(s) | 42, 80, 112, 121, 126 |
| SetI | ASST | 1 cut(s) | 98 |
| SfaNI | GCATC | 1 cut(s) | 55 |
| SgeI | CNNG | 3 cut(s) | 31, 60, 83 |
| TaqI | TCGA | 4 cut(s) | 18, 72, 86, 91 |
| TfiI | GAWTC | 1 cut(s) | 88 |