Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0017631

Physical Location & Seq

Genomic Coordinates Reverse (-)

42073918 .. 42075525

Gene Structure 1608 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG300200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1608 bp

ATGGATTCCGAGGACGAGATGCACTACTATGATTCCGTGGACGAAGATGACTATGATGAATACGATTACGACATGGAGGATGATGATGAGCTCTCTCAGCCGTCTAAGAATAGCTTTAAGGTGTTGAACGAGTCTGATTTAAAGGAACGCCAGGAAGATGACATCACTAGTGTAGCTGCTGTGCTTTCTCTATCAAGAGATGCCTCAACCCTTGTACTTCTCCACCATAACTGGAACTTGGACTCGGTTAAGGAGGCCTGGTTTGATAATGAAGATAAAGTCCGAGAAGCTGTTGGCTTGTTACCTGCATCTAGACTAATGGTTGTTGAGTCTTCGAACAAGTCGGGAGAAGTCAAGTGTAGGATCTGTCTTGAAGCCTGCCCTAGTGAGAAGATGAAGTCGGCTGGCTGTGGTCATCTTTTTTGCTGTGAATGCTGGGGAAGCTACATTGGTATATCCACCGCCGACGGTCCGGGGTGTTTGATGCTGAGATGTCCGGATCCTGCCTGTCGTGTTGCTATCGATGGAGACATGGTTGCGACATTCTGCTCCGAGGAGCATCAAAGCAAGTACTCTTATTACCTGCGTAGGTCTTATATTGAAGCCAGCAAGGACACCAAGTGGTGTCCTGCTCCAGGTTGCGAACATGCTATTAGTTATGATGGTTATGATGGAAACTATGATGTTTGTTGCCCCTGCAAATATGCATTTTGCTGGAATTGTACTGAGGAACCTCACCGGCCTGTGGACTGTAAGACTGTGAAACAATGGATTTTGAAGAACAGCTCCGAAGCTGAGAACACGAACTGGATATTGGCCAACTCTAAGCCATGTCCAAAGTGCCAGCGACCGATTGAGAAAAATCAAGGGTGTATGCACATGATATGCACACCGCCTTGTAAGTTTCACTTCTGCTGGCTATGCCTTGGTCCGTGGTCCAAACATGGTGAGAGGACAGGTGGTTATTATGCATGTAACAGCTACCAGAAAGCTAAGAAAGAGGGAGCTTACGATGAGGAGGAGAGAAGGAGAGAGATGGCTAAGAGTTCTTTGGAGAAATACACACATTATTTTGAGCGCTGGCAGAGCAATCAATCCTCGAGGCAGAAAGCTCTTGAGGATTTACATCAAATGCAGACTGTGAACATGGACAAGATGAGAGAGAATCAGGGTATAGGCGAGGGTGTTGCCCAGTTTTTAGTGAAGGCTTGGCAACAGATTGTTGAATGTAGGAGAGTGCTGAAATGGACTTATGCGTATGGGTACTACCTACCTGACCATGACACTGCTAAGAAGCAACTTTTTGAGTACTTGCAGGGTGAGGCAGAATCTGGCTTGGAAAGGCTTCATCAATGTGCCGAGAAGGAGCTACAGCCGTTCCTCGAGGAAGATGGCCCGTCCAAAGACTTCAACGACTACCAAACAAAGCTAGCTGGATTGACTGCCGTGACTAAAAACTACTTCGAGAATCTGGTAAGGGCATTAGAAAATGGCTTATCAGATGTGGAGTCTCAGCAATCTGGCAGTGCAGCAAAAGGTAGAAAAAAGAGGAATGCGGAAACGGTAATAGACAAGGAAGCGGAAACGGAAATAGGCAAGGATATATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000209 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010604 GO:0016567 GO:0016740 GO:0019222 GO:0019538 GO:0019787 GO:0019899 GO:0030162 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031624 GO:0032268 GO:0032270 GO:0032434 GO:0032436 GO:0032446 GO:0032991 GO:0036211 GO:0042176 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044390 GO:0044424 GO:0044464 GO:0045732 GO:0045862 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0060255 GO:0061136 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1901800 GO:1902494 GO:1903050 GO:1903052 GO:1903362 GO:1903364 GO:1990234 GO:2000058 GO:2000060

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

IBR

Protein Analysis

535

Amino Acids

61.27

Weight (kDa)

5.04

Isoelectric Point (pI)

60.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IBR	PF01485	190 - 251	1.1e-13	IBR domain, a half RING-finger domain
IBR	PF01485	273 - 315	1.6e-06	IBR domain, a half RING-finger domain
IBR_1	PF22191	273 - 313	6.3e-13	IBR domain
IBR_2	PF22605	274 - 314	2.2e-14	IBR domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0017631)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g24920
rosa_chinensis	RchiOBHm_Chr5g0044711
rosa_laevigata	RLG00000034290
rosa_multiflora	Rmu_co8279309.1_g000001 Rmu_sc0007318.1_g000013
rosa_roxburghii	Rroxscaffold_1G00036320
rosa_rugosa	Rorug05G0216800
rosa_samantha	Rh5AG300200 Rh5BG307000 Rh5CG334100 Rh5DG317100
rosa_wichuraiana	Rw5G027770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	2 cut(s)	1099, 1382
Acc36I	ACCTGC	2 cut(s)	313, 591
AccIII	TCCGGA	1 cut(s)	496
AciI	CCGC	4 cut(s)	462, 893, 1556, 1580
AclWI	GGATC	3 cut(s)	371, 494, 507
AcoI	YGGCCR	1 cut(s)	816
AdeI	CACNNNGTG	1 cut(s)	621
AfaI	GTAC	5 cut(s)	216, 572, 724, 1265, 1310
AfeI	AGCGCT	1 cut(s)	1079
AfiI	CCNNNNNNNGG	2 cut(s)	635, 745
AgsI	TTSAA	6 cut(s)	127, 374, 602, 778, 1226, 1411
AhlI	ACTAGT	1 cut(s)	167
AjnI	CCWGG	3 cut(s)	150, 257, 634
AjuI	GAANNNNNNNTTGG	2 cut(s)	797, 829
Alw21I	GWGCWC	1 cut(s)	93
Alw26I	GTCTC	2 cut(s)	522, 1515
AlwI	GGATC	3 cut(s)	371, 494, 507
AlwNI	CAGNNNCTG	1 cut(s)	1331
Ama87I	CYCGRG	2 cut(s)	1099, 1382
Aor13HI	TCCGGA	1 cut(s)	496
Aor51HI	AGCGCT	1 cut(s)	1079
AoxI	GGCC	4 cut(s)	255, 740, 816, 1393
ApeKI	GCWGC	2 cut(s)	176, 1529
Asp700I	GAANNNNTTC	1 cut(s)	1344
AspLEI	GCGC	1 cut(s)	1080
AspS9I	GGNCC	4 cut(s)	470, 929, 936, 1394
AsuC2I	CCSGG	1 cut(s)	474
AsuHPI	GGTGA	3 cut(s)	728, 959, 1331
AsuII	TTCGAA	1 cut(s)	335
AsuNHI	GCTAGC	1 cut(s)	1429
AvaI	CYCGRG	2 cut(s)	1099, 1382
AvaII	GGWCC	3 cut(s)	470, 929, 936
BalI	TGGCCA	1 cut(s)	818
BamHI	GGATCC	1 cut(s)	499
BanII	GRGCYC	1 cut(s)	93
BbsI	GAAGAC	1 cut(s)	324
Bbv12I	GWGCWC	1 cut(s)	93
BbvI	GCAGC	2 cut(s)	163, 1541
BccI	CCATC	5 cut(s)	518, 656, 665, 1030, 1385
BceAI	ACGGC	3 cut(s)	85, 1360, 1430
BcgI	CGANNNNNNTGC	2 cut(s)	1169, 1203
BciT130I	CCWGG	3 cut(s)	152, 259, 636
BcnI	CCSGG	1 cut(s)	474
BcoDI	GTCTC	2 cut(s)	522, 1515
BcuI	ACTAGT	1 cut(s)	167
BfaI	CTAG	4 cut(s)	168, 312, 384, 1430
BfmI	CTRYAG	1 cut(s)	1370
BfoI	RGCGCY	1 cut(s)	1081
BfuAI	ACCTGC	2 cut(s)	313, 591
BisI	GCNGC	2 cut(s)	177, 1530
BlsI	GCNGC	2 cut(s)	178, 1531
BmcAI	AGTACT	2 cut(s)	572, 1310
Bme1390I	CCNGG	4 cut(s)	152, 259, 474, 636
Bme18I	GGWCC	3 cut(s)	470, 929, 936
BmeT110I	CYCGRG	2 cut(s)	1099, 1382
BmgT120I	GGNCC	4 cut(s)	470, 929, 936, 1394
BmiI	GGNNCC	2 cut(s)	501, 732
BmrFI	CCNGG	4 cut(s)	152, 259, 474, 636
BmrI	ACTGGG	1 cut(s)	1186
BmsI	GCATC	5 cut(s)	9, 190, 317, 474, 568
BmtI	GCTAGC	1 cut(s)	1433
BmuI	ACTGGG	1 cut(s)	1186
BpiI	GAAGAC	1 cut(s)	324
BpmI	CTGGAG	1 cut(s)	618
Bpu14I	TTCGAA	1 cut(s)	335
BpuEI	CTTGAG	1 cut(s)	1136
BpuMI	CCSGG	1 cut(s)	474
Bsa29I	ATCGAT	1 cut(s)	522
BsaBI	GATNNNNATC	1 cut(s)	1125
BsaJI	CCNNGG	6 cut(s)	9, 36, 473, 552, 925, 932
BsaWI	WCCGGW	1 cut(s)	496
BsaXI	ACNNNNNCTCC	4 cut(s)	245, 275, 519, 549
Bsc4I	CCNNNNNNNGG	2 cut(s)	635, 745
Bse118I	RCCGGY	1 cut(s)	738
Bse1I	ACTGG	3 cut(s)	236, 812, 1192
Bse8I	GATNNNNATC	1 cut(s)	1125
BseAI	TCCGGA	1 cut(s)	496
BseBI	CCWGG	3 cut(s)	152, 259, 636
BseCI	ATCGAT	1 cut(s)	522
BseDI	CCNNGG	6 cut(s)	9, 36, 473, 552, 925, 932
BseGI	GGATG	1 cut(s)	85
BseJI	GATNNNNATC	1 cut(s)	1125
BseLI	CCNNNNNNNGG	2 cut(s)	635, 745
BseMII	CTCAG	5 cut(s)	110, 479, 717, 786, 1526
BseNI	ACTGG	3 cut(s)	236, 812, 1192
BseRI	GAGGAG	3 cut(s)	569, 1031, 1034
BseXI	GCAGC	2 cut(s)	163, 1541
BseYI	CCCAGC	1 cut(s)	435
BsgI	GTGCAG	1 cut(s)	1548
Bsh1285I	CGRYCG	1 cut(s)	851
BshFI	GGCC	4 cut(s)	257, 742, 818, 1395
BshVI	ATCGAT	1 cut(s)	522
BsiEI	CGRYCG	1 cut(s)	851
BsiHKAI	GWGCWC	1 cut(s)	93
BsiHKCI	CYCGRG	2 cut(s)	1099, 1382
BsiSI	CCGG	3 cut(s)	473, 497, 739
BslI	CCNNNNNNNGG	2 cut(s)	635, 745
BsmAI	GTCTC	2 cut(s)	522, 1515
BsmI	GAATGC	2 cut(s)	437, 1558
BsnI	GGCC	4 cut(s)	257, 742, 818, 1395
BsoBI	CYCGRG	2 cut(s)	1099, 1382
Bsp119I	TTCGAA	1 cut(s)	335
Bsp1286I	GDGCHC	1 cut(s)	93
Bsp13I	TCCGGA	1 cut(s)	496
Bsp143I	GATC	2 cut(s)	363, 499
BspACI	CCGC	4 cut(s)	462, 893, 1556, 1580
BspANI	GGCC	4 cut(s)	257, 742, 818, 1395
BspCNI	CTCAG	5 cut(s)	109, 480, 718, 787, 1525
BspDI	ATCGAT	1 cut(s)	522
BspEI	TCCGGA	1 cut(s)	496
BspLI	GGNNCC	2 cut(s)	501, 732
BspMI	ACCTGC	2 cut(s)	313, 591
BspOI	GCTAGC	1 cut(s)	1433
BspPI	GGATC	3 cut(s)	371, 494, 507
BspT104I	TTCGAA	1 cut(s)	335
BsrFI	RCCGGY	1 cut(s)	738
BsrI	ACTGG	3 cut(s)	236, 812, 1192
BssAI	RCCGGY	1 cut(s)	738
BssECI	CCNNGG	6 cut(s)	9, 36, 473, 552, 925, 932
BssMI	GATC	2 cut(s)	363, 499
BssT1I	CCWWGG	1 cut(s)	925
Bst2UI	CCWGG	3 cut(s)	152, 259, 636
Bst4CI	ACNGT	5 cut(s)	470, 752, 760, 1141, 1564
BstBI	TTCGAA	1 cut(s)	335
BstC8I	GCNNGC	7 cut(s)	379, 406, 607, 845, 917, 1082, 1431
BstDSI	CCRYGG	2 cut(s)	36, 932
BstENI	CCTNNNNNAGG	1 cut(s)	633
BstF5I	GGATG	1 cut(s)	85
BstH2I	RGCGCY	1 cut(s)	1081
BstHHI	GCGC	1 cut(s)	1080
BstKTI	GATC	2 cut(s)	366, 502
BstMAI	GTCTC	2 cut(s)	522, 1515
BstMBI	GATC	2 cut(s)	363, 499
BstMCI	CGRYCG	1 cut(s)	851
BstMWI	GCNNNNNNNGC	5 cut(s)	97, 432, 441, 921, 1086
BstNI	CCWGG	3 cut(s)	152, 259, 636
BstNSI	RCATGY	2 cut(s)	650, 975
BstSCI	CCNGG	4 cut(s)	150, 257, 472, 634
BstSFI	CTRYAG	1 cut(s)	1370
BstV1I	GCAGC	2 cut(s)	163, 1541
BstV2I	GAAGAC	1 cut(s)	324
BstX2I	RGATCY	2 cut(s)	363, 499
BstYI	RGATCY	2 cut(s)	363, 499
Bsu15I	ATCGAT	1 cut(s)	522
BsuRI	GGCC	4 cut(s)	257, 742, 818, 1395
BsuTUI	ATCGAT	1 cut(s)	522
BtgI	CCRYGG	2 cut(s)	36, 932
BtsCI	GGATG	1 cut(s)	85
BtsI	GCAGTG	2 cut(s)	1284, 1531
BtsIMutI	CAGTG	2 cut(s)	1284, 1531
BveI	ACCTGC	2 cut(s)	313, 591
Cac8I	GCNNGC	7 cut(s)	379, 406, 607, 845, 917, 1082, 1431
CaiI	CAGNNNCTG	1 cut(s)	1331
CfoI	GCGC	1 cut(s)	1080
Cfr10I	RCCGGY	1 cut(s)	738
Cfr13I	GGNCC	4 cut(s)	470, 929, 936, 1394
ClaI	ATCGAT	1 cut(s)	522
CpoI	CGGWCCG	1 cut(s)	470
Csp6I	GTAC	5 cut(s)	215, 571, 723, 1264, 1309
CspI	CGGWCCG	1 cut(s)	470
CviAII	CATG	9 cut(s)	73, 532, 647, 831, 880, 944, 972, 1147, 1280
CviQI	GTAC	5 cut(s)	215, 571, 723, 1264, 1309
DpnI	GATC	2 cut(s)	365, 501
DpnII	GATC	2 cut(s)	363, 499
DraI	TTTAAA	1 cut(s)	141
DraIII	CACNNNGTG	1 cut(s)	621
EaeI	YGGCCR	1 cut(s)	816
Ecl136II	GAGCTC	1 cut(s)	91
Eco130I	CCWWGG	1 cut(s)	925
Eco147I	AGGCCT	1 cut(s)	257
Eco24I	GRGCYC	1 cut(s)	93
Eco47I	GGWCC	3 cut(s)	470, 929, 936
Eco47III	AGCGCT	1 cut(s)	1079
Eco53kI	GAGCTC	1 cut(s)	91
Eco88I	CYCGRG	2 cut(s)	1099, 1382
EcoICRI	GAGCTC	1 cut(s)	91
EcoNI	CCTNNNNNAGG	1 cut(s)	633
EcoRII	CCWGG	3 cut(s)	150, 257, 634
EcoT14I	CCWWGG	1 cut(s)	925
EcoT22I	ATGCAT	2 cut(s)	709, 973
EcoT38I	GRGCYC	1 cut(s)	93
ErhI	CCWWGG	1 cut(s)	925
FaeI	CATG	9 cut(s)	76, 535, 650, 834, 883, 947, 975, 1150, 1283
FalI	AAGNNNNNCTT	4 cut(s)	98, 130, 893, 925
FatI	CATG	9 cut(s)	72, 531, 646, 830, 879, 943, 971, 1146, 1279
Fnu4HI	GCNGC	2 cut(s)	177, 1530
FokI	GGATG	1 cut(s)	92
FriOI	GRGCYC	1 cut(s)	93
Fsp4HI	GCNGC	2 cut(s)	177, 1530
FspBI	CTAG	4 cut(s)	168, 312, 384, 1430
GlaI	GCGC	1 cut(s)	1079
GluI	GCNGC	2 cut(s)	177, 1530
GsaI	CCCAGC	1 cut(s)	439
GsuI	CTGGAG	1 cut(s)	618
HaeII	RGCGCY	1 cut(s)	1081
HaeIII	GGCC	4 cut(s)	257, 742, 818, 1395
HapII	CCGG	3 cut(s)	473, 497, 739
HhaI	GCGC	1 cut(s)	1080
Hin1II	CATG	9 cut(s)	76, 535, 650, 834, 883, 947, 975, 1150, 1283
Hin6I	GCGC	1 cut(s)	1078
HinP1I	GCGC	1 cut(s)	1078
HinfI	GANTC	9 cut(s)	5, 32, 131, 242, 329, 1165, 1328, 1468, 1508
HpaII	CCGG	3 cut(s)	473, 497, 739
HphI	GGTGA	3 cut(s)	728, 959, 1331
Hpy166II	GTNNAC	3 cut(s)	40, 748, 1144
Hpy188I	TCNGA	6 cut(s)	10, 136, 284, 553, 790, 1501
Hpy188III	TCNNGA	7 cut(s)	195, 312, 345, 371, 497, 1115, 1465
Hpy8I	GTNNAC	3 cut(s)	40, 748, 1144
Hpy99I	CGWCG	1 cut(s)	470
HpyAV	CCTTC	3 cut(s)	1020, 1198, 1357
HpyCH4III	ACNGT	5 cut(s)	470, 752, 760, 1141, 1564
HpyF10VI	GCNNNNNNNGC	5 cut(s)	97, 432, 441, 921, 1086
Hsp92II	CATG	9 cut(s)	76, 535, 650, 834, 883, 947, 975, 1150, 1283
HspAI	GCGC	1 cut(s)	1078
Kpn2I	TCCGGA	1 cut(s)	496
Kzo9I	GATC	2 cut(s)	363, 499
LmnI	GCTCC	6 cut(s)	554, 556, 637, 791, 1004, 1366
Lsp1109I	GCAGC	2 cut(s)	163, 1541
LweI	GCATC	5 cut(s)	9, 190, 317, 474, 568
MaeI	CTAG	4 cut(s)	168, 312, 384, 1430
MaeIII	GTNAC	3 cut(s)	300, 974, 1447
MalI	GATC	2 cut(s)	365, 501
MboI	GATC	2 cut(s)	363, 499
MboII	GAAGA	7 cut(s)	56, 167, 284, 324, 403, 790, 1400
MflI	RGATCY	2 cut(s)	363, 499
MhlI	GDGCHC	1 cut(s)	93
MlsI	TGGCCA	1 cut(s)	818
MluCI	AATT	1 cut(s)	718
MluNI	TGGCCA	1 cut(s)	818
MlyI	GAGTC	4 cut(s)	140, 236, 338, 1517
Mox20I	TGGCCA	1 cut(s)	818
Mph1103I	ATGCAT	2 cut(s)	709, 973
MroI	TCCGGA	1 cut(s)	496
MroXI	GAANNNNTTC	1 cut(s)	1344
MscI	TGGCCA	1 cut(s)	818
MseI	TTAA	3 cut(s)	117, 140, 249
MslI	CAYNNNNRTG	2 cut(s)	27, 1353
Msp20I	TGGCCA	1 cut(s)	818
MspI	CCGG	3 cut(s)	473, 497, 739
MspR9I	CCNGG	4 cut(s)	152, 259, 474, 636
Mva1269I	GAATGC	2 cut(s)	437, 1558
MvaI	CCWGG	3 cut(s)	152, 259, 636
MwoI	GCNNNNNNNGC	5 cut(s)	97, 432, 441, 921, 1086
NciI	CCSGG	1 cut(s)	474
NdeII	GATC	2 cut(s)	363, 499
NheI	GCTAGC	1 cut(s)	1429
NlaIII	CATG	9 cut(s)	76, 535, 650, 834, 883, 947, 975, 1150, 1283
NlaIV	GGNNCC	2 cut(s)	501, 732
NmeAIII	GCCGAG	1 cut(s)	1384
NmuCI	GTSAC	1 cut(s)	1447
NsiI	ATGCAT	2 cut(s)	709, 973
NspI	RCATGY	2 cut(s)	650, 975
NspV	TTCGAA	1 cut(s)	335
PaeR7I	CTCGAG	2 cut(s)	1099, 1382
PceI	AGGCCT	1 cut(s)	257
PctI	GAATGC	2 cut(s)	437, 1558
PdmI	GAANNNNTTC	1 cut(s)	1344
PfeI	GAWTC	5 cut(s)	5, 32, 1165, 1328, 1468
PkrI	GCNGC	2 cut(s)	178, 1531
PleI	GAGTC	4 cut(s)	139, 236, 337, 1516
PpsI	GAGTC	4 cut(s)	139, 236, 337, 1516
Psp124BI	GAGCTC	1 cut(s)	93
Psp6I	CCWGG	3 cut(s)	150, 257, 634
PspFI	CCCAGC	1 cut(s)	435
PspGI	CCWGG	3 cut(s)	150, 257, 634
PspN4I	GGNNCC	2 cut(s)	501, 732
PspPI	GGNCC	4 cut(s)	470, 929, 936, 1394
PspXI	VCTCGAGB	2 cut(s)	1099, 1382
PstNI	CAGNNNCTG	1 cut(s)	1331
PsuI	RGATCY	2 cut(s)	363, 499
RsaI	GTAC	5 cut(s)	216, 572, 724, 1265, 1310
RsaNI	GTAC	5 cut(s)	215, 571, 723, 1264, 1309
RseI	CAYNNNNRTG	2 cut(s)	27, 1353
Rsr2I	CGGWCCG	1 cut(s)	470
RsrII	CGGWCCG	1 cut(s)	470
SacI	GAGCTC	1 cut(s)	93
SaqAI	TTAA	3 cut(s)	117, 140, 249
SatI	GCNGC	2 cut(s)	177, 1530
Sau3AI	GATC	2 cut(s)	363, 499
Sau96I	GGNCC	4 cut(s)	470, 929, 936, 1394
ScaI	AGTACT	2 cut(s)	572, 1310
SchI	GAGTC	4 cut(s)	140, 236, 338, 1517
ScrFI	CCNGG	4 cut(s)	152, 259, 474, 636
SduI	GDGCHC	1 cut(s)	93
SfaNI	GCATC	5 cut(s)	9, 190, 317, 474, 568
SfcI	CTRYAG	1 cut(s)	1370
Sfr274I	CTCGAG	2 cut(s)	1099, 1382
SfuI	TTCGAA	1 cut(s)	335
SinI	GGWCC	3 cut(s)	470, 929, 936
SlaI	CTCGAG	2 cut(s)	1099, 1382
SmiMI	CAYNNNNRTG	2 cut(s)	27, 1353
SmlI	CTYRAG	3 cut(s)	1099, 1115, 1382
SmoI	CTYRAG	3 cut(s)	1099, 1115, 1382
SpeI	ACTAGT	1 cut(s)	167
Sse9I	AATT	1 cut(s)	718
SseBI	AGGCCT	1 cut(s)	257
SsiI	CCGC	4 cut(s)	462, 893, 1556, 1580
SspMI	CTAG	4 cut(s)	168, 312, 384, 1430
SstI	GAGCTC	1 cut(s)	93
StuI	AGGCCT	1 cut(s)	257
StyD4I	CCNGG	4 cut(s)	150, 257, 472, 634
StyI	CCWWGG	1 cut(s)	925
TaaI	ACNGT	5 cut(s)	470, 752, 760, 1141, 1564
TaqI	TCGA	5 cut(s)	335, 522, 1100, 1383, 1464
TaqII	GACCGA	1 cut(s)	865
TasI	AATT	1 cut(s)	718
TatI	WGTACW	4 cut(s)	214, 570, 722, 1308
TfiI	GAWTC	5 cut(s)	5, 32, 1165, 1328, 1468
Tru1I	TTAA	3 cut(s)	117, 140, 249
Tru9I	TTAA	3 cut(s)	117, 140, 249
TscAI	CASTG	2 cut(s)	1291, 1531
TseFI	GTSAC	1 cut(s)	1447
TseI	GCWGC	2 cut(s)	176, 1529
Tsp45I	GTSAC	1 cut(s)	1447
TspDTI	ATGAA	4 cut(s)	72, 285, 410, 1337
TspGWI	ACGGA	3 cut(s)	25, 921, 1601
TspRI	CASTG	2 cut(s)	1291, 1531
VpaK11BI	GGWCC	3 cut(s)	470, 929, 936
XagI	CCTNNNNNAGG	1 cut(s)	633
XbaI	TCTAGA	1 cut(s)	311
XceI	RCATGY	2 cut(s)	650, 975
XhoI	CTCGAG	2 cut(s)	1099, 1382
XmnI	GAANNNNTTC	1 cut(s)	1344
XspI	CTAG	4 cut(s)	168, 312, 384, 1430
ZrmI	AGTACT	2 cut(s)	572, 1310
Zsp2I	ATGCAT	2 cut(s)	709, 973

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.