Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0007652

Physical Location & Seq

Genomic Coordinates Forward (+)

57398991 .. 57406392

Gene Structure 7402 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG418900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2229 bp

ATGGGTACTTCCCAAAATGATCAAACAATGGAGGGTTGGCTTTATCTCATTCGTTCTAATCGGATTGGGTTACAGTACTCCCGCAAACGCTACTTTGTTCTTCAAGGCCATCTTCTTAAAAGCTTCAAGTCACTCCCTGTTTCTGGCAATGAGGATCCCATAAGAAGTGCTGTCATAGACGCATGCATCCGAGTGACTGATGATGGACGTGAGAGCATTAGTAGAAAAGTATTCTTCATATTCACACTGTATAATACGTCAAATCACAATGATCAACTTAAGTTGGGAGCAAGCAGTCCAGAAGAAGCCGCAAGATGGATTCATTCCTTTCAGGAAGTGGCTTTAAAGGCTGGTCCGGATCATGGGAGTAATGTTTTGGAATGTTCAAGTAGCATATGGAAGTCCTTTAGATTAGGTGGATCTAATAGGGGAAGTCGTATTAGTTCTATAGACTGGACCCTTTGTTCTTCTACACAAACTGATGCTGTGACATCCGATGTAATTGCTCCTTCACCTTGGACAATCTTTGGTTGTCAGAATGGTCTACGACTATTTAAAGAAACGAAAGATAGGGATTCTCATGGGAAGTGGGATGATCATCCTGCCATAATGGCAGTAGGTGTGGTTGGTGGAACTTCAGAAGCCATATTCCAGACACTTATGTCCCTTGGTCCCTCAAGATCTGAATGGGACTTCTGTTTCTACAAGGGCAGCGTGGTTGAACACCTTGACGGTCACACTGATATCATTCACAAGCAGTTATATAGCGATTGGATGCCATGGGGAATGAAGCCGAGAGATCTATTGTTGCGGCGGTATTGGAGAAGGGAAGATGATGGGACATATGTTATTCTCTACCATTCTGTGTTCCATAAGAAGTGTCCATCTCAGAAAGGCTACGTCCGCGCCTGCCTTAAAAGTGGAGGATATGTTATATCACCTGTGAACCAAGGGAAACATTCAGCTGTGAAGCACATGCTTGCAATTGATTGGAAGTACTGGAAATCTTATCTGCAGACTTCTTCATCCCGATCTATGACCATCAAAATGCTAGGAAGAGTTGCTGCACTACGAGAGTTATTCAAAGCAAAAGTAGGAAACTATTCTTCCTCAGAGTTTTCATCTGGAGAGCTAAGGAGAAATTTTGGTGTGCATCAAAATGAAGGGTATGGAGAGGCTGATGCTCTGGCACTGACTGGGGATGGGAGCACCAATGAAAATATATTGGAAGAAGTGGATAACTCACCTTCAGAACATGCTAGTCTTGTTAGCTTGAATGATGCTTCTGATGAATTCTTTGATGTGCCTGAGCCTCCATACCATGATCAATCAGAAACTGACTGGACTCCTGATTTTGGCTCTGATATCTATTCACAGGAATTGCAGGATACACGTCATCCGAAGTTATCAACTGCTGCTGGTTTTGTGAAGAGATTGCATGATCTTACAGTTCAGAAGAGGGGCTATGTGGACCTACAAGAGATGACCAGGGAAGACAGTATGTCATGCAACTATGGGTTCACACTTCCAAAAGATTCAACTTGTTCTTTGGCTTGCAGTTGGACTGAGACAGACCCTTCTACTTTTCTAATTCGTGGCAAAAGTTATCTGGAAGACCGTAAGAAGGTTAAAGCAAAGGGCATGTTGATGCAAATGGTTGCTGCAGATTGGCTAAGATCTGACAAGCGTGAAGATGATCTTGGAGGTCGTCCTGGGAGCATTGTTCAGCTTTTTATTCTACAGAAATATGCAGCAAAGGGTGGGAAAGAATTCTTCTTCATTGTGAACATTCAGGTTCCAGGTTCAACCACATATAGCCTAGCGCTATACTATATGATGAGTTCTCCAGTTGAAGATGCACCCTTGCTAGAGAATTTTGTTAAGGGGGATGATGCATATAGAAATTCAAGGTTTAAGCTCATACCGTACATATCTAAGGGTTCATGGATTGTTAAGCAGAGTGTGGGAAAGAAGGCATGCATCATTGGTCAAGCACTTGAAATAAATTACTTCCATGGGAAGAACTACGTGGAGCTTGGTATTGACATTGGATCATCAACAGTCGCAAGGGGTGTGGTTAGTCTTGTCCTTGGGTACCTAAACAATCTTGTGATTGAGATGGCATTTTTGATACAGGCAAATACGCCAGAGGAGCTTCCAGAGTATCTTCTTGGGACCTGCCGCCTTAATCATCTTGATGCCTCTAAGGCCATTTTAGTGAAACCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1336 PH START

Protein Analysis

742

Amino Acids

83.35

Weight (kDa)

6.86

Isoelectric Point (pI)

46.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PH	PF00169	9 - 113	1.4e-07	PH domain
START	PF01852	200 - 335	2.4e-20	START domain
EDR2_C	PF07059	521 - 733	1.5e-75	Protein ENHANCED DISEASE RESISTANCE 2, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007652)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G28320
fragaria_vesca	FvH4_3g31950 FvH4_3g31950 FvH4_3g31950 FvH4_3g31950 FvH4_3g31950 FvH4_3g31950
malus_domestica	MD11G1137600.v1.1
prunus_persica	Prupe.6G103400_v2.0.a1 Prupe.6G103400_v2.0.a1 Prupe.6G103400_v2.0.a1 Prupe.6G103400_v2.0.a1
pyrus_communis	pycom11g11400
rosa_chinensis	RchiOBHm_Chr5g0058701
rosa_laevigata	RLG00000008103 RLG00000035242
rosa_multiflora	Rmu_sc0000367.1_g000218
rosa_roxburghii	Rroxscaffold_1G00021700
rosa_rugosa	Rorug05G0317500
rosa_samantha	Rh5AG383200 Rh5BG395100 Rh5CG418900 Rh5DG410600
rosa_wichuraiana	Rw5G036110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	661
Acc36I	ACCTGC	1 cut(s)	2186
Acc65I	GGTACC	1 cut(s)	2094
AccB1I	GGYRCC	1 cut(s)	2094
AccI	GTMKAC	1 cut(s)	544
AccII	CGCG	1 cut(s)	906
AccIII	TCCGGA	1 cut(s)	355
AciI	CCGC	6 cut(s)	82, 309, 811, 814, 904, 2182
AclWI	GGATC	5 cut(s)	149, 162, 366, 427, 2059
AcsI	RAATTY	5 cut(s)	1141, 1292, 1769, 1873, 1903
AcuI	CTGAAG	2 cut(s)	621, 1233
AfaI	GTAC	5 cut(s)	7, 77, 998, 1928, 2096
AfeI	AGCGCT	1 cut(s)	1824
AfiI	CCNNNNNNNGG	5 cut(s)	143, 315, 362, 1355, 1624
AflII	CTTAAG	1 cut(s)	278
AflIII	ACRYGT	1 cut(s)	1391
AhdI	GACNNNNNGTC	1 cut(s)	1501
AjiI	CACGTC	2 cut(s)	209, 1394
AjnI	CCWGG	3 cut(s)	1487, 1711, 1798
AjuI	GAANNNNNNNTTGG	2 cut(s)	1683, 1715
AloI	GAACNNNNNNTCC	2 cut(s)	448, 480
AluBI	AGCT	8 cut(s)	123, 965, 1132, 1272, 1729, 1918, 2035, 2155
AluI	AGCT	8 cut(s)	123, 965, 1132, 1272, 1729, 1918, 2035, 2155
Alw21I	GWGCWC	1 cut(s)	1211
Alw26I	GTCTC	1 cut(s)	1562
AlwI	GGATC	5 cut(s)	149, 162, 366, 427, 2059
AlwNI	CAGNNNCTG	1 cut(s)	1337
Aor13HI	TCCGGA	1 cut(s)	355
Aor51HI	AGCGCT	1 cut(s)	1824
AoxI	GGCC	2 cut(s)	106, 2208
ApeKI	GCWGC	5 cut(s)	711, 1064, 1415, 1661, 1751
ApoI	RAATTY	5 cut(s)	1141, 1292, 1769, 1873, 1903
Asp700I	GAANNNNTTC	2 cut(s)	1102, 1769
Asp718I	GGTACC	1 cut(s)	2094
AspLEI	GCGC	2 cut(s)	908, 1825
AspS9I	GGNCC	5 cut(s)	353, 456, 671, 1471, 2175
AsuHPI	GGTGA	3 cut(s)	504, 930, 1236
AvaII	GGWCC	5 cut(s)	353, 456, 671, 1471, 2175
BamHI	GGATCC	1 cut(s)	154
BanI	GGYRCC	1 cut(s)	2094
BbsI	GAAGAC	2 cut(s)	1500, 1620
Bbv12I	GWGCWC	1 cut(s)	1211
BbvI	GCAGC	5 cut(s)	723, 1051, 1402, 1648, 1763
BccI	CCATC	8 cut(s)	117, 197, 309, 830, 892, 1049, 1196, 2113
BcgI	CGANNNNNNTGC	2 cut(s)	485, 519
BciT130I	CCWGG	3 cut(s)	1489, 1713, 1800
BciVI	GTATCC	1 cut(s)	1381
BclI	TGATCA	4 cut(s)	19, 271, 595, 1324
BcoDI	GTCTC	1 cut(s)	1562
BfaI	CTAG	4 cut(s)	1052, 1260, 1820, 1868
BfmI	CTRYAG	4 cut(s)	447, 1013, 1662, 1739
BfoI	RGCGCY	1 cut(s)	1826
BfrI	CTTAAG	1 cut(s)	278
BfuAI	ACCTGC	1 cut(s)	2186
BfuI	GTATCC	1 cut(s)	1381
BglI	GCCNNNNNGGC	2 cut(s)	611, 2207
BglII	AGATCT	3 cut(s)	680, 799, 1676
BisI	GCNGC	8 cut(s)	309, 712, 812, 1065, 1416, 1662, 1752, 2182
BlsI	GCNGC	8 cut(s)	310, 713, 813, 1066, 1417, 1663, 1753, 2183
BmcAI	AGTACT	2 cut(s)	77, 998
Bme1390I	CCNGG	3 cut(s)	1489, 1713, 1800
Bme18I	GGWCC	5 cut(s)	353, 456, 671, 1471, 2175
BmeRI	GACNNNNNGTC	1 cut(s)	1501
BmgBI	CACGTC	2 cut(s)	209, 1394
BmgT120I	GGNCC	5 cut(s)	353, 456, 671, 1471, 2175
BmiI	GGNNCC	6 cut(s)	156, 458, 673, 1797, 2096, 2176
BmrFI	CCNGG	3 cut(s)	1489, 1713, 1800
BmrI	ACTGGG	1 cut(s)	1206
BmuI	ACTGGG	1 cut(s)	1206
BpiI	GAAGAC	2 cut(s)	1500, 1620
BpmI	CTGGAG	2 cut(s)	1146, 1830
Bpu10I	CCTNAGC	2 cut(s)	1133, 1308
BpuEI	CTTGAG	1 cut(s)	661
BsaAI	YACGTR	1 cut(s)	2029
BsaBI	GATNNNNATC	1 cut(s)	597
BsaJI	CCNNGG	8 cut(s)	515, 667, 779, 949, 1488, 1712, 2014, 2089
BsaWI	WCCGGW	1 cut(s)	355
BsaXI	ACNNNNNCTCC	2 cut(s)	915, 945
Bsc4I	CCNNNNNNNGG	5 cut(s)	143, 315, 362, 1355, 1624
Bse1I	ACTGG	5 cut(s)	458, 1004, 1201, 1346, 1847
Bse3DI	GCAATG	1 cut(s)	154
Bse8I	GATNNNNATC	1 cut(s)	597
BseAI	TCCGGA	1 cut(s)	355
BseBI	CCWGG	3 cut(s)	1489, 1713, 1800
BseDI	CCNNGG	8 cut(s)	515, 667, 779, 949, 1488, 1712, 2014, 2089
BseGI	GGATG	9 cut(s)	186, 491, 598, 598, 780, 1025, 1207, 1396, 1894
BseJI	GATNNNNATC	1 cut(s)	597
BseLI	CCNNNNNNNGG	5 cut(s)	143, 315, 362, 1355, 1624
BseMI	GCAATG	1 cut(s)	154
BseMII	CTCAG	4 cut(s)	902, 1125, 1299, 1557
BseNI	ACTGG	5 cut(s)	458, 1004, 1201, 1346, 1847
BseRI	GAGGAG	1 cut(s)	2165
BseXI	GCAGC	5 cut(s)	723, 1051, 1402, 1648, 1763
BsgI	GTGCAG	1 cut(s)	1050
Bsh1236I	CGCG	1 cut(s)	906
BshFI	GGCC	2 cut(s)	108, 2210
BshNI	GGYRCC	1 cut(s)	2094
BsiHKAI	GWGCWC	1 cut(s)	1211
BsiSI	CCGG	1 cut(s)	356
BslFI	GGGAC	5 cut(s)	649, 657, 704, 853, 2188
BslI	CCNNNNNNNGG	5 cut(s)	143, 315, 362, 1355, 1624
BsmAI	GTCTC	1 cut(s)	1562
BsmFI	GGGAC	5 cut(s)	649, 657, 704, 853, 2188
BsnI	GGCC	2 cut(s)	108, 2210
Bsp1286I	GDGCHC	1 cut(s)	1211
Bsp13I	TCCGGA	1 cut(s)	355
Bsp19I	CCATGG	2 cut(s)	779, 2014
BspACI	CCGC	6 cut(s)	82, 309, 811, 814, 904, 2182
BspANI	GGCC	2 cut(s)	108, 2210
BspCNI	CTCAG	4 cut(s)	901, 1124, 1300, 1558
BspEI	TCCGGA	1 cut(s)	355
BspFNI	CGCG	1 cut(s)	906
BspLI	GGNNCC	6 cut(s)	156, 458, 673, 1797, 2096, 2176
BspMAI	CTGCAG	2 cut(s)	1017, 1666
BspMI	ACCTGC	1 cut(s)	2186
BspPI	GGATC	5 cut(s)	149, 162, 366, 427, 2059
BspT107I	GGYRCC	1 cut(s)	2094
BspTI	CTTAAG	1 cut(s)	278
BsrDI	GCAATG	1 cut(s)	154
BsrI	ACTGG	5 cut(s)	458, 1004, 1201, 1346, 1847
BssECI	CCNNGG	8 cut(s)	515, 667, 779, 949, 1488, 1712, 2014, 2089
BssT1I	CCWWGG	6 cut(s)	515, 667, 779, 949, 2014, 2089
Bst2UI	CCWGG	3 cut(s)	1489, 1713, 1800
Bst4CI	ACNGT	8 cut(s)	75, 249, 734, 1450, 1499, 1619, 1926, 2062
Bst6I	CTCTTC	3 cut(s)	1051, 1424, 1451
BstAFI	CTTAAG	1 cut(s)	278
BstBAI	YACGTR	1 cut(s)	2029
BstC8I	GCNNGC	6 cut(s)	184, 292, 910, 981, 1555, 1978
BstDEI	CTNAG	8 cut(s)	888, 1111, 1133, 1308, 1566, 1673, 1935, 2205
BstDSI	CCRYGG	2 cut(s)	779, 2014
BstF5I	GGATG	9 cut(s)	186, 491, 598, 598, 780, 1025, 1207, 1396, 1894
BstFNI	CGCG	1 cut(s)	906
BstH2I	RGCGCY	1 cut(s)	1826
BstHHI	GCGC	2 cut(s)	908, 1825
BstMAI	GTCTC	1 cut(s)	1562
BstMWI	GCNNNNNNNGC	5 cut(s)	347, 611, 903, 2152, 2207
BstNI	CCWGG	3 cut(s)	1489, 1713, 1800
BstNSI	RCATGY	5 cut(s)	186, 979, 1259, 1645, 1980
BstSCI	CCNGG	3 cut(s)	1487, 1711, 1798
BstSFI	CTRYAG	4 cut(s)	447, 1013, 1662, 1739
BstUI	CGCG	1 cut(s)	906
BstV1I	GCAGC	5 cut(s)	723, 1051, 1402, 1648, 1763
BstV2I	GAAGAC	2 cut(s)	1500, 1620
BstX2I	RGATCY	5 cut(s)	154, 419, 680, 799, 1676
BstYI	RGATCY	5 cut(s)	154, 419, 680, 799, 1676
BsuI	GTATCC	1 cut(s)	1381
BsuRI	GGCC	2 cut(s)	108, 2210
BtgI	CCRYGG	2 cut(s)	779, 2014
BtrI	CACGTC	2 cut(s)	209, 1394
BtsCI	GGATG	9 cut(s)	186, 491, 598, 598, 780, 1025, 1207, 1396, 1894
BtsIMutI	CAGTG	3 cut(s)	245, 738, 1190
BveI	ACCTGC	1 cut(s)	2186
Cac8I	GCNNGC	6 cut(s)	184, 292, 910, 981, 1555, 1978
CaiI	CAGNNNCTG	1 cut(s)	1337
CfoI	GCGC	2 cut(s)	908, 1825
Cfr13I	GGNCC	5 cut(s)	353, 456, 671, 1471, 2175
CseI	GACGC	1 cut(s)	188
Csp6I	GTAC	5 cut(s)	6, 76, 997, 1927, 2095
CspCI	CAANNNNNGTGG	2 cut(s)	2055, 2090
CviQI	GTAC	5 cut(s)	6, 76, 997, 1927, 2095
DdeI	CTNAG	8 cut(s)	888, 1111, 1133, 1308, 1566, 1673, 1935, 2205
DraI	TTTAAA	2 cut(s)	345, 556
DrdI	GACNNNNNNGTC	1 cut(s)	661
DriI	GACNNNNNGTC	1 cut(s)	1501
DseDI	GACNNNNNNGTC	1 cut(s)	661
Eam1104I	CTCTTC	3 cut(s)	1051, 1424, 1451
Eam1105I	GACNNNNNGTC	1 cut(s)	1501
EarI	CTCTTC	3 cut(s)	1051, 1424, 1451
Eco130I	CCWWGG	6 cut(s)	515, 667, 779, 949, 2014, 2089
Eco32I	GATATC	2 cut(s)	745, 1366
Eco47I	GGWCC	5 cut(s)	353, 456, 671, 1471, 2175
Eco47III	AGCGCT	1 cut(s)	1824
Eco57I	CTGAAG	2 cut(s)	621, 1233
EcoO109I	RGGNCCY	1 cut(s)	2175
EcoRI	GAATTC	2 cut(s)	1292, 1769
EcoRII	CCWGG	3 cut(s)	1487, 1711, 1798
EcoRV	GATATC	2 cut(s)	745, 1366
EcoT14I	CCWWGG	6 cut(s)	515, 667, 779, 949, 2014, 2089
EcoT22I	ATGCAT	3 cut(s)	188, 1897, 1982
ErhI	CCWWGG	6 cut(s)	515, 667, 779, 949, 2014, 2089
FalI	AAGNNNNNCTT	4 cut(s)	96, 128, 1683, 1715
FaqI	GGGAC	5 cut(s)	649, 657, 704, 853, 2188
FauI	CCCGC	1 cut(s)	89
FauNDI	CATATG	2 cut(s)	395, 844
FbaI	TGATCA	4 cut(s)	19, 271, 595, 1324
FblI	GTMKAC	1 cut(s)	544
Fnu4HI	GCNGC	8 cut(s)	309, 712, 812, 1065, 1416, 1662, 1752, 2182
FokI	GGATG	9 cut(s)	173, 478, 585, 605, 787, 1012, 1214, 1383, 1901
Fsp4HI	GCNGC	8 cut(s)	309, 712, 812, 1065, 1416, 1662, 1752, 2182
FspBI	CTAG	4 cut(s)	1052, 1260, 1820, 1868
GlaI	GCGC	2 cut(s)	907, 1824
GluI	GCNGC	8 cut(s)	309, 712, 812, 1065, 1416, 1662, 1752, 2182
GsuI	CTGGAG	2 cut(s)	1146, 1830
HaeII	RGCGCY	1 cut(s)	1826
HaeIII	GGCC	2 cut(s)	108, 2210
HapII	CCGG	1 cut(s)	356
HgaI	GACGC	1 cut(s)	188
HhaI	GCGC	2 cut(s)	908, 1825
Hin6I	GCGC	2 cut(s)	906, 1823
HinP1I	GCGC	2 cut(s)	906, 1823
HindIII	AAGCTT	1 cut(s)	121
HinfI	GANTC	4 cut(s)	319, 575, 1345, 1535
HpaII	CCGG	1 cut(s)	356
HphI	GGTGA	3 cut(s)	504, 930, 1236
Hpy166II	GTNNAC	5 cut(s)	545, 946, 1471, 1521, 1786
Hpy8I	GTNNAC	5 cut(s)	545, 946, 1471, 1521, 1786
HpyAV	CCTTC	7 cut(s)	519, 819, 1157, 1257, 1587, 1618, 1966
HpyCH4III	ACNGT	8 cut(s)	75, 249, 734, 1450, 1499, 1619, 1926, 2062
HpyCH4IV	ACGT	5 cut(s)	208, 257, 900, 1393, 2028
HpyF10VI	GCNNNNNNNGC	5 cut(s)	347, 611, 903, 2152, 2207
HpyF3I	CTNAG	8 cut(s)	888, 1111, 1133, 1308, 1566, 1673, 1935, 2205
HpySE526I	ACGT	5 cut(s)	208, 257, 900, 1393, 2028
HspAI	GCGC	2 cut(s)	906, 1823
Kpn2I	TCCGGA	1 cut(s)	355
KpnI	GGTACC	1 cut(s)	2098
Ksp22I	TGATCA	4 cut(s)	19, 271, 595, 1324
LmnI	GCTCC	6 cut(s)	287, 511, 1206, 1716, 2032, 2152
Lsp1109I	GCAGC	5 cut(s)	723, 1051, 1402, 1648, 1763
MaeI	CTAG	4 cut(s)	1052, 1260, 1820, 1868
MaeII	ACGT	5 cut(s)	208, 257, 900, 1393, 2028
MaeIII	GTNAC	5 cut(s)	69, 129, 193, 487, 734
MfeI	CAATTG	1 cut(s)	984
MflI	RGATCY	5 cut(s)	154, 419, 680, 799, 1676
MhlI	GDGCHC	1 cut(s)	1211
MlyI	GAGTC	1 cut(s)	1339
MmeI	TCCRAC	1 cut(s)	1541
Mph1103I	ATGCAT	3 cut(s)	188, 1897, 1982
MroI	TCCGGA	1 cut(s)	355
MroXI	GAANNNNTTC	2 cut(s)	1102, 1769
MslI	CAYNNNNRTG	6 cut(s)	191, 1046, 1158, 1646, 2196, 2216
MspA1I	CMGCKG	1 cut(s)	965
MspCI	CTTAAG	1 cut(s)	278
MspI	CCGG	1 cut(s)	356
MspR9I	CCNGG	3 cut(s)	1489, 1713, 1800
MunI	CAATTG	1 cut(s)	984
MvaI	CCWGG	3 cut(s)	1489, 1713, 1800
MvnI	CGCG	1 cut(s)	906
MwoI	GCNNNNNNNGC	5 cut(s)	347, 611, 903, 2152, 2207
NcoI	CCATGG	2 cut(s)	779, 2014
NdeI	CATATG	2 cut(s)	395, 844
NlaIV	GGNNCC	6 cut(s)	156, 458, 673, 1797, 2096, 2176
NmeAIII	GCCGAG	1 cut(s)	819
NmuCI	GTSAC	4 cut(s)	129, 193, 487, 734
NsiI	ATGCAT	3 cut(s)	188, 1897, 1982
NspI	RCATGY	5 cut(s)	186, 979, 1259, 1645, 1980
PaeI	GCATGC	2 cut(s)	186, 1980
PdmI	GAANNNNTTC	2 cut(s)	1102, 1769
PfeI	GAWTC	3 cut(s)	319, 575, 1535
PkrI	GCNGC	8 cut(s)	310, 713, 813, 1066, 1417, 1663, 1753, 2183
PleI	GAGTC	1 cut(s)	1339
PpsI	GAGTC	1 cut(s)	1339
Ppu21I	YACGTR	1 cut(s)	2029
PpuMI	RGGWCCY	1 cut(s)	2175
Psp5II	RGGWCCY	1 cut(s)	2175
Psp6I	CCWGG	3 cut(s)	1487, 1711, 1798
PspGI	CCWGG	3 cut(s)	1487, 1711, 1798
PspN4I	GGNNCC	6 cut(s)	156, 458, 673, 1797, 2096, 2176
PspPI	GGNCC	5 cut(s)	353, 456, 671, 1471, 2175
PspPPI	RGGWCCY	1 cut(s)	2175
PstI	CTGCAG	2 cut(s)	1017, 1666
PstNI	CAGNNNCTG	1 cut(s)	1337
PsuI	RGATCY	5 cut(s)	154, 419, 680, 799, 1676
PvuII	CAGCTG	1 cut(s)	965
RsaI	GTAC	5 cut(s)	7, 77, 998, 1928, 2096
RsaNI	GTAC	5 cut(s)	6, 76, 997, 1927, 2095
RseI	CAYNNNNRTG	6 cut(s)	191, 1046, 1158, 1646, 2196, 2216
SatI	GCNGC	8 cut(s)	309, 712, 812, 1065, 1416, 1662, 1752, 2182
Sau96I	GGNCC	5 cut(s)	353, 456, 671, 1471, 2175
ScaI	AGTACT	2 cut(s)	77, 998
SchI	GAGTC	1 cut(s)	1339
ScrFI	CCNGG	3 cut(s)	1489, 1713, 1800
SduI	GDGCHC	1 cut(s)	1211
SfcI	CTRYAG	4 cut(s)	447, 1013, 1662, 1739
SinI	GGWCC	5 cut(s)	353, 456, 671, 1471, 2175
SmiMI	CAYNNNNRTG	6 cut(s)	191, 1046, 1158, 1646, 2196, 2216
SmlI	CTYRAG	2 cut(s)	278, 676
SmoI	CTYRAG	2 cut(s)	278, 676
SphI	GCATGC	2 cut(s)	186, 1980
SsiI	CCGC	6 cut(s)	82, 309, 811, 814, 904, 2182
SspMI	CTAG	4 cut(s)	1052, 1260, 1820, 1868
StyD4I	CCNGG	3 cut(s)	1487, 1711, 1798
StyI	CCWWGG	6 cut(s)	515, 667, 779, 949, 2014, 2089
TaaI	ACNGT	8 cut(s)	75, 249, 734, 1450, 1499, 1619, 1926, 2062
TaiI	ACGT	5 cut(s)	211, 260, 903, 1396, 2031
TatI	WGTACW	2 cut(s)	75, 996
TauI	GCSGC	3 cut(s)	311, 814, 2184
TfiI	GAWTC	3 cut(s)	319, 575, 1535
TscAI	CASTG	3 cut(s)	252, 745, 1197
TseFI	GTSAC	4 cut(s)	129, 193, 487, 734
TseI	GCWGC	5 cut(s)	711, 1064, 1415, 1661, 1751
Tsp45I	GTSAC	4 cut(s)	129, 193, 487, 734
TspRI	CASTG	3 cut(s)	252, 745, 1197
Vha464I	CTTAAG	1 cut(s)	278
VpaK11BI	GGWCC	5 cut(s)	353, 456, 671, 1471, 2175
XapI	RAATTY	5 cut(s)	1141, 1292, 1769, 1873, 1903
XceI	RCATGY	5 cut(s)	186, 979, 1259, 1645, 1980
XmiI	GTMKAC	1 cut(s)	544
XmnI	GAANNNNTTC	2 cut(s)	1102, 1769
XspI	CTAG	4 cut(s)	1052, 1260, 1820, 1868
ZrmI	AGTACT	2 cut(s)	77, 998
Zsp2I	ATGCAT	3 cut(s)	188, 1897, 1982

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.