Rh6AG159600

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
Physical Location & Seq
Forward (+)
24956397 .. 24959627
3231 bp
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UTR
Exon/CDS
Intron
Rh6AG159600.1

Sequence Viewer

Length: 348 bp
ATGACCAAGTCCAAGAATTTCCTCAACAATCTCATCAAAACCTTCGGGTTCAGCTCAAGCAAAGATGGCCATAACGAAGAGGACTTTGAGAGAATTGCTCAACAGGAACAGAAGAATGATCGGGTCAAGGAGGCGATTAGTGATATGATGAAGAAGATTGATATGATGGTATCTGGAGTTCTGGACCATGTACACAATGCAACATCCAACAGCATTTTAGATCAAGCCATTGATTCAGAAGAATCTCAACACAAAGACTTCCTCAAGCTGACTTTGTGCCACTGCAAAATAATCTTGAATTGGAGGAAGCCTATTGCAAAGCTTTGTTATGCCGCTTATGTTTCGTAA

Protein Analysis

115

Amino Acids

13.21

Weight (kDa)

6.95

Isoelectric Point (pI)

37.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0030353)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr6g0268201
rosa_samantha Rh6AG159600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 333
AcoI YGGCCR 1 cut(s) 67
AcsI RAATTY 1 cut(s) 16
AfaI GTAC 1 cut(s) 192
AgsI TTSAA 1 cut(s) 298
AluBI AGCT 3 cut(s) 54, 268, 322
AluI AGCT 3 cut(s) 54, 268, 322
AoxI GGCC 1 cut(s) 67
ApoI RAATTY 1 cut(s) 16
AspS9I GGNCC 1 cut(s) 184
AvaII GGWCC 1 cut(s) 184
BalI TGGCCA 1 cut(s) 69
BccI CCATC 2 cut(s) 59, 160
BisI GCNGC 1 cut(s) 333
BlsI GCNGC 1 cut(s) 334
Bme18I GGWCC 1 cut(s) 184
BmgT120I GGNCC 1 cut(s) 184
BplI GAGNNNNNCTC 2 cut(s) 82, 114
BpmI CTGGAG 1 cut(s) 195
BpuEI CTTGAG 2 cut(s) 40, 248
BseGI GGATG 1 cut(s) 203
BshFI GGCC 1 cut(s) 69
BsnI GGCC 1 cut(s) 69
Bsp1407I TGTACA 1 cut(s) 190
Bsp143I GATC 2 cut(s) 118, 220
BspACI CCGC 1 cut(s) 333
BspANI GGCC 1 cut(s) 69
BsrGI TGTACA 1 cut(s) 190
BssMI GATC 2 cut(s) 118, 220
Bst6I CTCTTC 1 cut(s) 72
BstAUI TGTACA 1 cut(s) 190
BstF5I GGATG 1 cut(s) 203
BstKTI GATC 2 cut(s) 121, 223
BstMBI GATC 2 cut(s) 118, 220
BstMWI GCNNNNNNNGC 1 cut(s) 66
BsuRI GGCC 1 cut(s) 69
BtsCI GGATG 1 cut(s) 203
BtsI GCAGTG 1 cut(s) 280
BtsIMutI CAGTG 1 cut(s) 280
Cfr13I GGNCC 1 cut(s) 184
Csp6I GTAC 1 cut(s) 191
CviAII CATG 1 cut(s) 188
CviJI RGCY 6 cut(s) 54, 69, 227, 268, 310, 322
CviKI_1 RGCY 6 cut(s) 54, 69, 227, 268, 310, 322
CviQI GTAC 1 cut(s) 191
DpnI GATC 2 cut(s) 120, 222
DpnII GATC 2 cut(s) 118, 220
EaeI YGGCCR 1 cut(s) 67
Eam1104I CTCTTC 1 cut(s) 72
EarI CTCTTC 1 cut(s) 72
Eco47I GGWCC 1 cut(s) 184
FaeI CATG 1 cut(s) 191
FaiI YATR 6 cut(s) 72, 146, 164, 189, 330, 339
FatI CATG 1 cut(s) 187
Fnu4HI GCNGC 1 cut(s) 333
FokI GGATG 1 cut(s) 190
Fsp4HI GCNGC 1 cut(s) 333
GluI GCNGC 1 cut(s) 333
GsuI CTGGAG 1 cut(s) 195
HaeIII GGCC 1 cut(s) 69
Hin1II CATG 1 cut(s) 191
HindIII AAGCTT 1 cut(s) 320
HinfI GANTC 2 cut(s) 233, 242
Hpy166II GTNNAC 1 cut(s) 193
Hpy188I TCNGA 1 cut(s) 238
Hpy188III TCNNGA 3 cut(s) 174, 182, 295
Hpy8I GTNNAC 1 cut(s) 193
HpyAV CCTTC 1 cut(s) 52
HpyCH4V TGCA 3 cut(s) 200, 285, 317
HpyF10VI GCNNNNNNNGC 1 cut(s) 66
Hsp92II CATG 1 cut(s) 191
Kzo9I GATC 2 cut(s) 118, 220
LpnPI CCDG 3 cut(s) 89, 159, 167
MalI GATC 2 cut(s) 120, 222
MboI GATC 2 cut(s) 118, 220
MboII GAAGA 5 cut(s) 89, 124, 163, 166, 251
MlsI TGGCCA 1 cut(s) 69
MluCI AATT 3 cut(s) 16, 93, 298
MluNI TGGCCA 1 cut(s) 69
MmeI TCCRAC 1 cut(s) 231
MnlI CCTC 5 cut(s) 32, 73, 124, 272, 297
Mox20I TGGCCA 1 cut(s) 69
MscI TGGCCA 1 cut(s) 69
Msp20I TGGCCA 1 cut(s) 69
MwoI GCNNNNNNNGC 1 cut(s) 66
NdeII GATC 2 cut(s) 118, 220
NlaIII CATG 1 cut(s) 191
PfeI GAWTC 2 cut(s) 233, 242
PflFI GACNNNGTC 1 cut(s) 7
PkrI GCNGC 1 cut(s) 334
PspPI GGNCC 1 cut(s) 184
PsrI GAACNNNNNNTAC 2 cut(s) 162, 194
PsyI GACNNNGTC 1 cut(s) 7
RsaI GTAC 1 cut(s) 192
RsaNI GTAC 1 cut(s) 191
SatI GCNGC 1 cut(s) 333
Sau3AI GATC 2 cut(s) 118, 220
Sau96I GGNCC 1 cut(s) 184
SetI ASST 4 cut(s) 44, 56, 270, 324
SinI GGWCC 1 cut(s) 184
SmlI CTYRAG 2 cut(s) 55, 263
SmoI CTYRAG 2 cut(s) 55, 263
Sse9I AATT 3 cut(s) 16, 93, 298
SsiI CCGC 1 cut(s) 333
TasI AATT 3 cut(s) 16, 93, 298
TatI WGTACW 1 cut(s) 190
TauI GCSGC 1 cut(s) 335
TfiI GAWTC 2 cut(s) 233, 242
TscAI CASTG 1 cut(s) 287
TspDTI ATGAA 1 cut(s) 164
TspRI CASTG 1 cut(s) 287
Tth111I GACNNNGTC 1 cut(s) 7
VpaK11BI GGWCC 1 cut(s) 184
XapI RAATTY 1 cut(s) 16
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.