Rh6AG342800

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
Physical Location & Seq
Forward (+)
54257023 .. 54262566
5544 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG342800.1

Sequence Viewer

Length: 393 bp
ATGAAGAGAAGACATCCCTGCCATCAGTTGAAGGATCACCGTTGCTGGTCAGATTTGGAAATTTTGTCGAAGACTATCTTTACTTTCTTTCTATGTAGTCAATACTATATAAGTATTGACGACTATACCCCCAATAATGAGAGAAGCCTCCGACCAGAAAAGCCTCCAATCGAAAAAACTCCCGCTGCACCCCATGATCATGGGATTTTTCGTCTGTATTCATATGATCTGAAACATGAAGGACATTGGTCTATTGAATGGCCATCTTCCCCGAATAGATGTTCCCCTAAAGGTGTATGCGGAATTAATAGCTATTGTGTCACAATGGGGGCAGCAATTGACTATAGATGTCTTCCTAGATTCAAATCTGTCAACCCAGGAAATCAGGCTTGA

Protein Analysis

130

Amino Acids

15.11

Weight (kDa)

8.7

Isoelectric Point (pI)

47.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0029627)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0334531
rosa_samantha Rh6AG342800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 183, 300
AclWI GGATC 1 cut(s) 42
AcoI YGGCCR 1 cut(s) 260
AcsI RAATTY 1 cut(s) 60
AgsI TTSAA 3 cut(s) 31, 257, 364
AjnI CCWGG 1 cut(s) 376
AluBI AGCT 1 cut(s) 312
AluI AGCT 1 cut(s) 312
AlwI GGATC 1 cut(s) 42
AoxI GGCC 1 cut(s) 260
ApeKI GCWGC 2 cut(s) 185, 332
ApoI RAATTY 1 cut(s) 60
AseI ATTAAT 1 cut(s) 306
AsuHPI GGTGA 1 cut(s) 29
BalI TGGCCA 1 cut(s) 262
BbsI GAAGAC 3 cut(s) 16, 77, 344
BbvI GCAGC 2 cut(s) 172, 344
BccI CCATC 2 cut(s) 30, 271
BciT130I CCWGG 1 cut(s) 378
BclI TGATCA 1 cut(s) 196
BfaI CTAG 1 cut(s) 357
BfmI CTRYAG 1 cut(s) 343
BisI GCNGC 2 cut(s) 186, 333
BlsI GCNGC 2 cut(s) 187, 334
Bme1390I CCNGG 1 cut(s) 378
BmrFI CCNGG 1 cut(s) 378
BoxI GACNNNNGTC 1 cut(s) 247
BpiI GAAGAC 3 cut(s) 16, 77, 344
BsaBI GATNNNNATC 1 cut(s) 364
BsaJI CCNNGG 1 cut(s) 376
Bse8I GATNNNNATC 1 cut(s) 364
BseBI CCWGG 1 cut(s) 378
BseDI CCNNGG 1 cut(s) 376
BseGI GGATG 1 cut(s) 13
BseJI GATNNNNATC 1 cut(s) 364
BseXI GCAGC 2 cut(s) 172, 344
BsgI GTGCAG 1 cut(s) 171
BshFI GGCC 1 cut(s) 262
BsnI GGCC 1 cut(s) 262
Bsp143I GATC 3 cut(s) 34, 196, 226
BspACI CCGC 2 cut(s) 183, 300
BspANI GGCC 1 cut(s) 262
BspPI GGATC 1 cut(s) 42
BssECI CCNNGG 1 cut(s) 376
BssMI GATC 3 cut(s) 34, 196, 226
Bst2UI CCWGG 1 cut(s) 378
Bst4CI ACNGT 1 cut(s) 41
BstF5I GGATG 1 cut(s) 13
BstKTI GATC 3 cut(s) 37, 199, 229
BstMBI GATC 3 cut(s) 34, 196, 226
BstNI CCWGG 1 cut(s) 378
BstPAI GACNNNNGTC 1 cut(s) 247
BstSCI CCNGG 1 cut(s) 376
BstSFI CTRYAG 1 cut(s) 343
BstV1I GCAGC 2 cut(s) 172, 344
BstV2I GAAGAC 3 cut(s) 16, 77, 344
BstXI CCANNNNNNTGG 1 cut(s) 200
BsuRI GGCC 1 cut(s) 262
BtsCI GGATG 1 cut(s) 13
CviAII CATG 3 cut(s) 194, 200, 236
CviJI RGCY 5 cut(s) 147, 163, 262, 312, 389
CviKI_1 RGCY 5 cut(s) 147, 163, 262, 312, 389
DpnI GATC 3 cut(s) 36, 198, 228
DpnII GATC 3 cut(s) 34, 196, 226
EaeI YGGCCR 1 cut(s) 260
EcoRII CCWGG 1 cut(s) 376
FaeI CATG 3 cut(s) 197, 203, 239
FalI AAGNNNNNCTT 2 cut(s) 62, 94
FatI CATG 3 cut(s) 193, 199, 235
FauI CCCGC 1 cut(s) 190
FauNDI CATATG 1 cut(s) 223
FbaI TGATCA 1 cut(s) 196
Fnu4HI GCNGC 2 cut(s) 186, 333
Fsp4HI GCNGC 2 cut(s) 186, 333
FspBI CTAG 1 cut(s) 357
GluI GCNGC 2 cut(s) 186, 333
HaeIII GGCC 1 cut(s) 262
Hin1II CATG 3 cut(s) 197, 203, 239
HincII GTYRAC 1 cut(s) 373
HindII GTYRAC 1 cut(s) 373
HinfI GANTC 1 cut(s) 360
HphI GGTGA 1 cut(s) 29
Hpy166II GTNNAC 1 cut(s) 373
Hpy188I TCNGA 3 cut(s) 52, 152, 231
Hpy8I GTNNAC 1 cut(s) 373
HpyAV CCTTC 2 cut(s) 25, 233
HpyCH4III ACNGT 1 cut(s) 41
HpyCH4V TGCA 1 cut(s) 188
Hsp92II CATG 3 cut(s) 197, 203, 239
Ksp22I TGATCA 1 cut(s) 196
Kzo9I GATC 3 cut(s) 34, 196, 226
LpnPI CCDG 5 cut(s) 31, 31, 168, 363, 371
Lsp1109I GCAGC 2 cut(s) 172, 344
MaeI CTAG 1 cut(s) 357
MaeIII GTNAC 1 cut(s) 319
MalI GATC 3 cut(s) 36, 198, 228
MboI GATC 3 cut(s) 34, 196, 226
MboII GAAGA 5 cut(s) 16, 21, 82, 258, 344
MfeI CAATTG 1 cut(s) 336
MlsI TGGCCA 1 cut(s) 262
MluCI AATT 3 cut(s) 60, 303, 336
MluNI TGGCCA 1 cut(s) 262
MmeI TCCRAC 1 cut(s) 175
MnlI CCTC 2 cut(s) 158, 174
Mox20I TGGCCA 1 cut(s) 262
MscI TGGCCA 1 cut(s) 262
MseI TTAA 1 cut(s) 306
MslI CAYNNNNRTG 1 cut(s) 198
Msp20I TGGCCA 1 cut(s) 262
MspA1I CMGCKG 1 cut(s) 185
MspR9I CCNGG 1 cut(s) 378
MunI CAATTG 1 cut(s) 336
MvaI CCWGG 1 cut(s) 378
NdeI CATATG 1 cut(s) 223
NdeII GATC 3 cut(s) 34, 196, 226
NlaIII CATG 3 cut(s) 197, 203, 239
NmuCI GTSAC 1 cut(s) 319
PfeI GAWTC 1 cut(s) 360
PkrI GCNGC 2 cut(s) 187, 334
PshAI GACNNNNGTC 1 cut(s) 247
PshBI ATTAAT 1 cut(s) 306
Psp6I CCWGG 1 cut(s) 376
PspGI CCWGG 1 cut(s) 376
RseI CAYNNNNRTG 1 cut(s) 198
SaqAI TTAA 1 cut(s) 306
SatI GCNGC 2 cut(s) 186, 333
Sau3AI GATC 3 cut(s) 34, 196, 226
ScrFI CCNGG 1 cut(s) 378
SetI ASST 2 cut(s) 295, 314
SfcI CTRYAG 1 cut(s) 343
SmiMI CAYNNNNRTG 1 cut(s) 198
Sse9I AATT 3 cut(s) 60, 303, 336
SsiI CCGC 2 cut(s) 183, 300
SspMI CTAG 1 cut(s) 357
StyD4I CCNGG 1 cut(s) 376
TaaI ACNGT 1 cut(s) 41
TaqI TCGA 2 cut(s) 68, 171
TasI AATT 3 cut(s) 60, 303, 336
TfiI GAWTC 1 cut(s) 360
Tru1I TTAA 1 cut(s) 306
Tru9I TTAA 1 cut(s) 306
TseFI GTSAC 1 cut(s) 319
TseI GCWGC 2 cut(s) 185, 332
Tsp45I GTSAC 1 cut(s) 319
TspDTI ATGAA 3 cut(s) 17, 210, 252
VspI ATTAAT 1 cut(s) 306
XapI RAATTY 1 cut(s) 60
XspI CTAG 1 cut(s) 357
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.