Rh6BG379200

Leucine-rich repeat receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
Physical Location & Seq
Forward (+)
60758754 .. 60759513
760 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG379200.1

Sequence Viewer

Length: 219 bp
ATGAAGGCCGCGACGGAGATTTTGGGAAATGGAGGATTGGGGTCAGCTTACAAGGATGTGATGGGTATTGGGTTGTCTGTGGTGGTGAAGAGGATGAGGGACATGAATAGATTGGGGAGAGATGGAATTGATGCTGAAATGAAGAGTATTGCCCTCATTCTCCAATCAAAGCTTGAAATGCCCAGCTCGAAAAGTAACATATCAGCATTTGGAAGGTAG

Protein Analysis

72

Amino Acids

7.69

Weight (kDa)

9.87

Isoelectric Point (pI)

46.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0020068)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 11
AciI CCGC 1 cut(s) 9
AgsI TTSAA 1 cut(s) 176
AluBI AGCT 3 cut(s) 47, 172, 186
AluI AGCT 3 cut(s) 47, 172, 186
AoxI GGCC 1 cut(s) 6
ArsI GACNNNNNNTTYG 1 cut(s) 36
AsuHPI GGTGA 1 cut(s) 97
BccI CCATC 2 cut(s) 55, 116
BisI GCNGC 1 cut(s) 9
BlsI GCNGC 1 cut(s) 10
BmsI GCATC 1 cut(s) 121
BseGI GGATG 2 cut(s) 61, 99
BseYI CCCAGC 1 cut(s) 182
Bsh1236I CGCG 1 cut(s) 11
BshFI GGCC 1 cut(s) 8
BslFI GGGAC 1 cut(s) 113
BsmFI GGGAC 1 cut(s) 113
BsnI GGCC 1 cut(s) 8
BspACI CCGC 1 cut(s) 9
BspANI GGCC 1 cut(s) 8
BspFNI CGCG 1 cut(s) 11
Bst6I CTCTTC 2 cut(s) 83, 137
BstF5I GGATG 2 cut(s) 61, 99
BstFNI CGCG 1 cut(s) 11
BstMWI GCNNNNNNNGC 1 cut(s) 178
BstUI CGCG 1 cut(s) 11
BsuRI GGCC 1 cut(s) 8
BtsCI GGATG 2 cut(s) 61, 99
CviAII CATG 1 cut(s) 103
CviJI RGCY 4 cut(s) 8, 47, 172, 186
CviKI_1 RGCY 4 cut(s) 8, 47, 172, 186
Eam1104I CTCTTC 2 cut(s) 83, 137
EarI CTCTTC 2 cut(s) 83, 137
FaeI CATG 1 cut(s) 106
FaiI YATR 2 cut(s) 104, 200
FaqI GGGAC 1 cut(s) 113
FatI CATG 1 cut(s) 102
Fnu4HI GCNGC 1 cut(s) 9
FokI GGATG 2 cut(s) 68, 106
Fsp4HI GCNGC 1 cut(s) 9
GluI GCNGC 1 cut(s) 9
GsaI CCCAGC 1 cut(s) 186
HaeIII GGCC 1 cut(s) 8
Hin1II CATG 1 cut(s) 106
HindIII AAGCTT 1 cut(s) 170
HphI GGTGA 1 cut(s) 97
Hpy99I CGWCG 1 cut(s) 16
HpyAV CCTTC 1 cut(s) 207
HpyF10VI GCNNNNNNNGC 1 cut(s) 178
Hsp92II CATG 1 cut(s) 106
LpnPI CCDG 1 cut(s) 196
LweI GCATC 1 cut(s) 121
MaeIII GTNAC 1 cut(s) 194
MboII GAAGA 2 cut(s) 100, 154
MluCI AATT 1 cut(s) 126
MnlI CCTC 4 cut(s) 26, 84, 90, 164
MvnI CGCG 1 cut(s) 11
MwoI GCNNNNNNNGC 1 cut(s) 178
NlaIII CATG 1 cut(s) 106
PkrI GCNGC 1 cut(s) 10
PspFI CCCAGC 1 cut(s) 182
SatI GCNGC 1 cut(s) 9
SetI ASST 4 cut(s) 49, 174, 188, 218
SfaNI GCATC 1 cut(s) 121
SgeI CNNG 6 cut(s) 22, 64, 115, 185, 195, 199
Sse9I AATT 1 cut(s) 126
SsiI CCGC 1 cut(s) 9
TaqI TCGA 1 cut(s) 188
TasI AATT 1 cut(s) 126
TauI GCSGC 1 cut(s) 11
TspDTI ATGAA 3 cut(s) 17, 119, 155
TspGWI ACGGA 1 cut(s) 29
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.