PB1 domain
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_samantha | Rh2BG031900 Rh6DG362000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 293 |
| AciI | CCGC | 1 cut(s) | 144 |
| AcoI | YGGCCR | 1 cut(s) | 186 |
| AcsI | RAATTY | 1 cut(s) | 295 |
| AgsI | TTSAA | 1 cut(s) | 172 |
| AleI | CACNNNNGTG | 1 cut(s) | 144 |
| AluBI | AGCT | 2 cut(s) | 73, 79 |
| AluI | AGCT | 2 cut(s) | 73, 79 |
| Alw26I | GTCTC | 1 cut(s) | 251 |
| AoxI | GGCC | 2 cut(s) | 42, 186 |
| ApoI | RAATTY | 1 cut(s) | 295 |
| AsuHPI | GGTGA | 2 cut(s) | 158, 266 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 225, 258 |
| BalI | TGGCCA | 1 cut(s) | 188 |
| BccI | CCATC | 1 cut(s) | 157 |
| BceAI | ACGGC | 1 cut(s) | 157 |
| BclI | TGATCA | 1 cut(s) | 307 |
| BcoDI | GTCTC | 1 cut(s) | 251 |
| BmiI | GGNNCC | 1 cut(s) | 130 |
| BpuEI | CTTGAG | 1 cut(s) | 59 |
| Bse3DI | GCAATG | 1 cut(s) | 94 |
| BseMI | GCAATG | 1 cut(s) | 94 |
| BseMII | CTCAG | 2 cut(s) | 74, 146 |
| BshFI | GGCC | 2 cut(s) | 44, 188 |
| BsmAI | GTCTC | 1 cut(s) | 251 |
| BsnI | GGCC | 2 cut(s) | 44, 188 |
| Bsp143I | GATC | 1 cut(s) | 307 |
| BspACI | CCGC | 1 cut(s) | 144 |
| BspANI | GGCC | 2 cut(s) | 44, 188 |
| BspCNI | CTCAG | 2 cut(s) | 73, 147 |
| BspHI | TCATGA | 1 cut(s) | 310 |
| BspLI | GGNNCC | 1 cut(s) | 130 |
| BsrDI | GCAATG | 1 cut(s) | 94 |
| BssMI | GATC | 1 cut(s) | 307 |
| Bst4CI | ACNGT | 1 cut(s) | 333 |
| BstC8I | GCNNGC | 1 cut(s) | 186 |
| BstDEI | CTNAG | 4 cut(s) | 60, 66, 155, 261 |
| BstKTI | GATC | 1 cut(s) | 310 |
| BstMAI | GTCTC | 1 cut(s) | 251 |
| BstMBI | GATC | 1 cut(s) | 307 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 70, 190 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 89 |
| BsuRI | GGCC | 2 cut(s) | 44, 188 |
| BtsIMutI | CAGTG | 2 cut(s) | 152, 329 |
| Cac8I | GCNNGC | 1 cut(s) | 186 |
| CciI | TCATGA | 1 cut(s) | 310 |
| CviAII | CATG | 2 cut(s) | 10, 311 |
| CviJI | RGCY | 6 cut(s) | 44, 64, 73, 79, 188, 249 |
| CviKI_1 | RGCY | 6 cut(s) | 44, 64, 73, 79, 188, 249 |
| DdeI | CTNAG | 4 cut(s) | 60, 66, 155, 261 |
| DpnI | GATC | 1 cut(s) | 309 |
| DpnII | GATC | 1 cut(s) | 307 |
| EaeI | YGGCCR | 1 cut(s) | 186 |
| FaeI | CATG | 2 cut(s) | 13, 314 |
| FaiI | YATR | 7 cut(s) | 11, 84, 96, 279, 293, 312, 337 |
| FatI | CATG | 2 cut(s) | 9, 310 |
| FbaI | TGATCA | 1 cut(s) | 307 |
| HaeIII | GGCC | 2 cut(s) | 44, 188 |
| Hin1II | CATG | 2 cut(s) | 13, 314 |
| HinfI | GANTC | 2 cut(s) | 105, 149 |
| HphI | GGTGA | 2 cut(s) | 158, 266 |
| Hpy188I | TCNGA | 2 cut(s) | 133, 199 |
| Hpy188III | TCNNGA | 1 cut(s) | 311 |
| Hpy99I | CGWCG | 1 cut(s) | 36 |
| HpyCH4III | ACNGT | 1 cut(s) | 333 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 70, 190 |
| HpyF3I | CTNAG | 4 cut(s) | 60, 66, 155, 261 |
| Hsp92II | CATG | 2 cut(s) | 13, 314 |
| Ksp22I | TGATCA | 1 cut(s) | 307 |
| Kzo9I | GATC | 1 cut(s) | 307 |
| LmnI | GCTCC | 1 cut(s) | 84 |
| LpnPI | CCDG | 2 cut(s) | 104, 170 |
| MaeIII | GTNAC | 1 cut(s) | 98 |
| MalI | GATC | 1 cut(s) | 309 |
| MboI | GATC | 1 cut(s) | 307 |
| MboII | GAAGA | 2 cut(s) | 172, 184 |
| MfeI | CAATTG | 1 cut(s) | 179 |
| MlsI | TGGCCA | 1 cut(s) | 188 |
| MluCI | AATT | 2 cut(s) | 179, 295 |
| MluNI | TGGCCA | 1 cut(s) | 188 |
| MlyI | GAGTC | 1 cut(s) | 114 |
| MnlI | CCTC | 3 cut(s) | 16, 33, 150 |
| Mox20I | TGGCCA | 1 cut(s) | 188 |
| MscI | TGGCCA | 1 cut(s) | 188 |
| MslI | CAYNNNNRTG | 2 cut(s) | 87, 144 |
| Msp20I | TGGCCA | 1 cut(s) | 188 |
| MunI | CAATTG | 1 cut(s) | 179 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 70, 190 |
| NdeII | GATC | 1 cut(s) | 307 |
| NlaIII | CATG | 2 cut(s) | 13, 314 |
| NlaIV | GGNNCC | 1 cut(s) | 130 |
| OliI | CACNNNNGTG | 1 cut(s) | 144 |
| PagI | TCATGA | 1 cut(s) | 310 |
| PfeI | GAWTC | 1 cut(s) | 149 |
| PleI | GAGTC | 1 cut(s) | 113 |
| PpsI | GAGTC | 1 cut(s) | 113 |
| PsiI | TTATAA | 1 cut(s) | 293 |
| PspN4I | GGNNCC | 1 cut(s) | 130 |
| RseI | CAYNNNNRTG | 2 cut(s) | 87, 144 |
| Sau3AI | GATC | 1 cut(s) | 307 |
| SchI | GAGTC | 1 cut(s) | 114 |
| SetI | ASST | 5 cut(s) | 8, 25, 75, 81, 306 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 87, 144 |
| SmlI | CTYRAG | 1 cut(s) | 74 |
| SmoI | CTYRAG | 1 cut(s) | 74 |
| Sse9I | AATT | 2 cut(s) | 179, 295 |
| SsiI | CCGC | 1 cut(s) | 144 |
| TaaI | ACNGT | 1 cut(s) | 333 |
| TasI | AATT | 2 cut(s) | 179, 295 |
| TfiI | GAWTC | 1 cut(s) | 149 |
| TscAI | CASTG | 2 cut(s) | 159, 336 |
| TspDTI | ATGAA | 3 cut(s) | 26, 294, 330 |
| TspGWI | ACGGA | 1 cut(s) | 251 |
| TspRI | CASTG | 2 cut(s) | 159, 336 |
| XapI | RAATTY | 1 cut(s) | 295 |