Rh7AG498300

Glutamyl endopeptidase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0031356
Physical Location & Seq
Reverse (-)
69830466 .. 69833889
3424 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG498300.1

Sequence Viewer

Length: 966 bp
ATGTGGACAGCTGATGGGAAGTTTGTTAGAGAACTTTGTGATTTGCCTCTTGCCGCGGACATCCCCATTGCATTCAATAGTGTGCGAAGAGGGATGCGCTCTCTCAATTGGAGGGCGGAAAAACCATGTCATCAACACTTTACTGGGTTGAGACCCAAGATGAAGGAGATGCGAAAGTGGAAGTTTCTCCACGTACGTTATATTGTTTATACACAGCCTGCTGAACCACTAGAAGGTGAAGATCCAACAATCTTACACAAACTTGATCTCCGTTATGGAGGGATTTCTTGGTCTGATGATTCACTAGCTCTAGTTTACGAGTCATGGTACAACACACGGAGAACAAGAACCTGGGTAATTTCTCCTGGATCAAATGATGTCAGTCCCCGCATCCTGTTTGATAGGTCATCGGAAGATGTGTACTCCGATCCTGGCTCCCCCATGCTGCGGAGAACTCCTGCTGGCACATATGTGCTTGCAAAAGTGAAGAAAGAAAATGATGAAGGCACTTATTTACTACTGAATGGAAATGGTGCTACACCAGAGGGGAATATCCCATTCCTCGATTTGTTTGACATAAATACAGGAAATAAAGAACGAATATGGAAGAGTGACAAAGAAAAGTATTATGAGGCTAATAAAATTAAGAAGCCAATCTTGCTTATCCATGGAGAGGAAGAGAATAATCCAGGGACTTTAACCACGCAGTCCGATCGTTTCTTTAATGCTCTGAAAGGTCATGGTGCTCTTTGCCGCCTTGTGATTCTTCCCTTTGAGAACCATGGCTATGCTGCAAGAGAGAACACTTCTGATGTAAATGTTGATCAAGATGCATGTAAAGACAATATGGGCACAGGATCTACAAATTCTGAAAGCAAAGCAGTGGCTACTGGCGGAGGCAGTGGCTCAGATGTGTCAAATTCTGGGCACGAAGGAGTTGACTCTTTACCGAGAATACATTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_S9

Protein Analysis

321

Amino Acids

36.04

Weight (kDa)

6.52

Isoelectric Point (pI)

34.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0031356)

Species Orthologous Gene IDs
rosa_multiflora Rmu_sc0005873.1_g000010
rosa_samantha Rh7AG498300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 56
AciI CCGC 7 cut(s) 54, 56, 116, 388, 448, 754, 894
AclWI GGATC 4 cut(s) 236, 376, 422, 865
AcsI RAATTY 2 cut(s) 865, 919
AfaI GTAC 3 cut(s) 195, 329, 422
AfiI CCNNNNNNNGG 3 cut(s) 233, 447, 673
AgsI TTSAA 1 cut(s) 76
AjnI CCWGG 4 cut(s) 350, 364, 430, 688
AleI CACNNNNGTG 1 cut(s) 470
AluBI AGCT 2 cut(s) 11, 308
AluI AGCT 2 cut(s) 11, 308
Alw21I GWGCWC 1 cut(s) 748
Alw26I GTCTC 1 cut(s) 145
AlwI GGATC 4 cut(s) 236, 376, 422, 865
ApeKI GCWGC 2 cut(s) 445, 791
ApoI RAATTY 2 cut(s) 865, 919
AspLEI GCGC 1 cut(s) 99
AsuHPI GGTGA 1 cut(s) 248
BaeGI GKGCMC 2 cut(s) 854, 930
Bbv12I GWGCWC 1 cut(s) 748
BbvI GCAGC 2 cut(s) 432, 778
BccI CCATC 1 cut(s) 8
BcgI CGANNNNNNTGC 2 cut(s) 695, 729
BciT130I CCWGG 4 cut(s) 352, 366, 432, 690
BclI TGATCA 1 cut(s) 823
BcoDI GTCTC 1 cut(s) 145
BfaI CTAG 3 cut(s) 230, 305, 311
BisI GCNGC 4 cut(s) 54, 446, 754, 792
BlsI GCNGC 4 cut(s) 55, 447, 755, 793
Bme1390I CCNGG 4 cut(s) 352, 366, 432, 690
BmiI GGNNCC 1 cut(s) 436
BmrFI CCNGG 4 cut(s) 352, 366, 432, 690
BmrI ACTGGG 1 cut(s) 153
BmsI GCATC 4 cut(s) 84, 159, 399, 820
BmuI ACTGGG 1 cut(s) 153
BsaAI YACGTR 1 cut(s) 193
BsaI GGTCTC 1 cut(s) 145
BsaJI CCNNGG 5 cut(s) 54, 351, 667, 689, 781
BsaXI ACNNNNNCTCC 2 cut(s) 252, 282
Bsc4I CCNNNNNNNGG 3 cut(s) 233, 447, 673
Bse1I ACTGG 2 cut(s) 148, 895
Bse3DI GCAATG 2 cut(s) 66, 958
BseBI CCWGG 4 cut(s) 352, 366, 432, 690
BseDI CCNNGG 5 cut(s) 54, 351, 667, 689, 781
BseGI GGATG 3 cut(s) 60, 99, 390
BseLI CCNNNNNNNGG 3 cut(s) 233, 447, 673
BseMI GCAATG 2 cut(s) 66, 958
BseMII CTCAG 1 cut(s) 921
BseNI ACTGG 2 cut(s) 148, 895
BseSI GKGCMC 2 cut(s) 854, 930
BseXI GCAGC 2 cut(s) 432, 778
Bsh1236I CGCG 1 cut(s) 56
Bsh1285I CGRYCG 1 cut(s) 715
BsiEI CGRYCG 1 cut(s) 715
BsiHKAI GWGCWC 1 cut(s) 748
BsiWI CGTACG 1 cut(s) 193
BslFI GGGAC 2 cut(s) 369, 706
BslI CCNNNNNNNGG 3 cut(s) 233, 447, 673
BsmAI GTCTC 1 cut(s) 145
BsmFI GGGAC 2 cut(s) 369, 706
BsmI GAATGC 1 cut(s) 71
Bso31I GGTCTC 1 cut(s) 145
Bsp1286I GDGCHC 3 cut(s) 748, 854, 930
Bsp143I GATC 7 cut(s) 241, 265, 368, 427, 712, 823, 857
Bsp19I CCATGG 2 cut(s) 667, 781
BspACI CCGC 7 cut(s) 54, 56, 116, 388, 448, 754, 894
BspCNI CTCAG 1 cut(s) 920
BspFNI CGCG 1 cut(s) 56
BspLI GGNNCC 1 cut(s) 436
BspPI GGATC 4 cut(s) 236, 376, 422, 865
BspTNI GGTCTC 1 cut(s) 145
BsrDI GCAATG 2 cut(s) 66, 958
BsrI ACTGG 2 cut(s) 148, 895
BssECI CCNNGG 5 cut(s) 54, 351, 667, 689, 781
BssMI GATC 7 cut(s) 241, 265, 368, 427, 712, 823, 857
BssT1I CCWWGG 2 cut(s) 667, 781
Bst2UI CCWGG 4 cut(s) 352, 366, 432, 690
Bst6I CTCTTC 3 cut(s) 82, 602, 672
BstBAI YACGTR 1 cut(s) 193
BstC8I GCNNGC 3 cut(s) 219, 463, 477
BstDEI CTNAG 1 cut(s) 907
BstDSI CCRYGG 3 cut(s) 54, 667, 781
BstF5I GGATG 3 cut(s) 60, 99, 390
BstFNI CGCG 1 cut(s) 56
BstHHI GCGC 1 cut(s) 99
BstKTI GATC 7 cut(s) 244, 268, 371, 430, 715, 826, 860
BstMAI GTCTC 1 cut(s) 145
BstMBI GATC 7 cut(s) 241, 265, 368, 427, 712, 823, 857
BstMCI CGRYCG 1 cut(s) 715
BstMWI GCNNNNNNNGC 1 cut(s) 658
BstNI CCWGG 4 cut(s) 352, 366, 432, 690
BstNSI RCATGY 1 cut(s) 837
BstSCI CCNGG 4 cut(s) 350, 364, 430, 688
BstSLI GKGCMC 2 cut(s) 854, 930
BstUI CGCG 1 cut(s) 56
BstV1I GCAGC 2 cut(s) 432, 778
BstX2I RGATCY 2 cut(s) 241, 857
BstYI RGATCY 2 cut(s) 241, 857
BtgI CCRYGG 3 cut(s) 54, 667, 781
BtsCI GGATG 3 cut(s) 60, 99, 390
BtsI GCAGTG 2 cut(s) 888, 907
BtsIMutI CAGTG 2 cut(s) 888, 907
Cac8I GCNNGC 3 cut(s) 219, 463, 477
CfoI GCGC 1 cut(s) 99
Cfr42I CCGCGG 1 cut(s) 57
Csp6I GTAC 3 cut(s) 194, 328, 421
CviAII CATG 7 cut(s) 126, 324, 442, 668, 740, 782, 834
CviJI RGCY 9 cut(s) 11, 217, 308, 435, 635, 652, 786, 887, 906
CviKI_1 RGCY 9 cut(s) 11, 217, 308, 435, 635, 652, 786, 887, 906
CviQI GTAC 3 cut(s) 194, 328, 421
DdeI CTNAG 1 cut(s) 907
DpnI GATC 7 cut(s) 243, 267, 370, 429, 714, 825, 859
DpnII GATC 7 cut(s) 241, 265, 368, 427, 712, 823, 857
Eam1104I CTCTTC 3 cut(s) 82, 602, 672
EarI CTCTTC 3 cut(s) 82, 602, 672
EciI GGCGGA 2 cut(s) 131, 909
Eco130I CCWWGG 2 cut(s) 667, 781
Eco31I GGTCTC 1 cut(s) 145
EcoRII CCWGG 4 cut(s) 350, 364, 430, 688
EcoT14I CCWWGG 2 cut(s) 667, 781
EcoT22I ATGCAT 1 cut(s) 835
ErhI CCWWGG 2 cut(s) 667, 781
FaeI CATG 7 cut(s) 129, 327, 445, 671, 743, 785, 837
FalI AAGNNNNNCTT 2 cut(s) 641, 673
FaqI GGGAC 2 cut(s) 369, 706
FatI CATG 7 cut(s) 125, 323, 441, 667, 739, 781, 833
FauI CCCGC 1 cut(s) 395
FauNDI CATATG 1 cut(s) 469
FbaI TGATCA 1 cut(s) 823
Fnu4HI GCNGC 4 cut(s) 54, 446, 754, 792
FokI GGATG 3 cut(s) 47, 106, 377
Fsp4HI GCNGC 4 cut(s) 54, 446, 754, 792
FspBI CTAG 3 cut(s) 230, 305, 311
GlaI GCGC 1 cut(s) 98
GluI GCNGC 4 cut(s) 54, 446, 754, 792
HhaI GCGC 1 cut(s) 99
Hin1II CATG 7 cut(s) 129, 327, 445, 671, 743, 785, 837
Hin6I GCGC 1 cut(s) 97
HinP1I GCGC 1 cut(s) 97
HincII GTYRAC 1 cut(s) 940
HindII GTYRAC 1 cut(s) 940
HinfI GANTC 4 cut(s) 299, 320, 763, 941
HphI GGTGA 1 cut(s) 248
Hpy166II GTNNAC 4 cut(s) 6, 316, 421, 940
Hpy188I TCNGA 8 cut(s) 295, 412, 427, 712, 732, 811, 871, 910
Hpy188III TCNNGA 1 cut(s) 827
Hpy8I GTNNAC 4 cut(s) 6, 316, 421, 940
HpyAV CCTTC 4 cut(s) 157, 227, 497, 926
HpyCH4IV ACGT 2 cut(s) 192, 196
HpyCH4V TGCA 4 cut(s) 71, 479, 794, 833
HpyF10VI GCNNNNNNNGC 1 cut(s) 658
HpyF3I CTNAG 1 cut(s) 907
HpySE526I ACGT 2 cut(s) 192, 196
Hsp92II CATG 7 cut(s) 129, 327, 445, 671, 743, 785, 837
HspAI GCGC 1 cut(s) 97
Ksp22I TGATCA 1 cut(s) 823
KspI CCGCGG 1 cut(s) 57
Kzo9I GATC 7 cut(s) 241, 265, 368, 427, 712, 823, 857
LmnI GCTCC 1 cut(s) 440
Lsp1109I GCAGC 2 cut(s) 432, 778
LweI GCATC 4 cut(s) 84, 159, 399, 820
MaeI CTAG 3 cut(s) 230, 305, 311
MaeII ACGT 2 cut(s) 192, 196
MaeIII GTNAC 1 cut(s) 611
MalI GATC 7 cut(s) 243, 267, 370, 429, 714, 825, 859
MboI GATC 7 cut(s) 241, 265, 368, 427, 712, 823, 857
MboII GAAGA 7 cut(s) 99, 251, 425, 499, 619, 689, 758
MfeI CAATTG 1 cut(s) 106
MflI RGATCY 2 cut(s) 241, 857
MhlI GDGCHC 3 cut(s) 748, 854, 930
MluCI AATT 5 cut(s) 106, 357, 642, 865, 919
MlyI GAGTC 2 cut(s) 329, 935
MmeI TCCRAC 1 cut(s) 269
MnlI CCTC 9 cut(s) 57, 83, 105, 272, 538, 572, 625, 667, 890
Mph1103I ATGCAT 1 cut(s) 835
MseI TTAA 3 cut(s) 645, 698, 723
MslI CAYNNNNRTG 2 cut(s) 470, 786
MspA1I CMGCKG 2 cut(s) 11, 56
MspR9I CCNGG 4 cut(s) 352, 366, 432, 690
MunI CAATTG 1 cut(s) 106
Mva1269I GAATGC 1 cut(s) 71
MvaI CCWGG 4 cut(s) 352, 366, 432, 690
MvnI CGCG 1 cut(s) 56
MwoI GCNNNNNNNGC 1 cut(s) 658
NcoI CCATGG 2 cut(s) 667, 781
NdeI CATATG 1 cut(s) 469
NdeII GATC 7 cut(s) 241, 265, 368, 427, 712, 823, 857
NlaIII CATG 7 cut(s) 129, 327, 445, 671, 743, 785, 837
NlaIV GGNNCC 1 cut(s) 436
NmuCI GTSAC 1 cut(s) 611
NsiI ATGCAT 1 cut(s) 835
NspI RCATGY 1 cut(s) 837
OliI CACNNNNGTG 1 cut(s) 470
PctI GAATGC 1 cut(s) 71
PfeI GAWTC 2 cut(s) 299, 763
Pfl23II CGTACG 1 cut(s) 193
PfoI TCCNGGA 1 cut(s) 364
PkrI GCNGC 4 cut(s) 55, 447, 755, 793
Ple19I CGATCG 1 cut(s) 715
PleI GAGTC 2 cut(s) 328, 935
PpsI GAGTC 2 cut(s) 328, 935
Ppu21I YACGTR 1 cut(s) 193
Psp6I CCWGG 4 cut(s) 350, 364, 430, 688
PspGI CCWGG 4 cut(s) 350, 364, 430, 688
PspLI CGTACG 1 cut(s) 193
PspN4I GGNNCC 1 cut(s) 436
PsuI RGATCY 2 cut(s) 241, 857
PvuI CGATCG 1 cut(s) 715
PvuII CAGCTG 1 cut(s) 11
RsaI GTAC 3 cut(s) 195, 329, 422
RsaNI GTAC 3 cut(s) 194, 328, 421
RseI CAYNNNNRTG 2 cut(s) 470, 786
SacII CCGCGG 1 cut(s) 57
SaqAI TTAA 3 cut(s) 645, 698, 723
SatI GCNGC 4 cut(s) 54, 446, 754, 792
Sau3AI GATC 7 cut(s) 241, 265, 368, 427, 712, 823, 857
SchI GAGTC 2 cut(s) 329, 935
ScrFI CCNGG 4 cut(s) 352, 366, 432, 690
SduI GDGCHC 3 cut(s) 748, 854, 930
SetI ASST 8 cut(s) 13, 195, 199, 238, 310, 353, 407, 739
SfaNI GCATC 4 cut(s) 84, 159, 399, 820
Sfr303I CCGCGG 1 cut(s) 57
SgrBI CCGCGG 1 cut(s) 57
SmiMI CAYNNNNRTG 2 cut(s) 470, 786
Sse9I AATT 5 cut(s) 106, 357, 642, 865, 919
SsiI CCGC 7 cut(s) 54, 56, 116, 388, 448, 754, 894
SspMI CTAG 3 cut(s) 230, 305, 311
StyD4I CCNGG 4 cut(s) 350, 364, 430, 688
StyI CCWWGG 2 cut(s) 667, 781
TaiI ACGT 2 cut(s) 195, 199
TaqI TCGA 1 cut(s) 564
TasI AATT 5 cut(s) 106, 357, 642, 865, 919
TatI WGTACW 1 cut(s) 420
TauI GCSGC 2 cut(s) 56, 756
TfiI GAWTC 2 cut(s) 299, 763
Tru1I TTAA 3 cut(s) 645, 698, 723
Tru9I TTAA 3 cut(s) 645, 698, 723
TscAI CASTG 2 cut(s) 888, 907
TseFI GTSAC 1 cut(s) 611
TseI GCWGC 2 cut(s) 445, 791
Tsp45I GTSAC 1 cut(s) 611
TspDTI ATGAA 2 cut(s) 176, 516
TspGWI ACGGA 2 cut(s) 260, 352
TspRI CASTG 2 cut(s) 888, 907
XapI RAATTY 2 cut(s) 865, 919
XceI RCATGY 1 cut(s) 837
XspI CTAG 3 cut(s) 230, 305, 311
Zsp2I ATGCAT 1 cut(s) 835
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.