Rh7BG016800

mitogen-activated protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0033173
Physical Location & Seq
Forward (+)
1062131 .. 1066372
4242 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG016800.1

Sequence Viewer

Length: 1287 bp
ATGGGGAGTGGAGCAACCTTGGTGGACGGTGTTCGTCGCTGGTTTCAACGTCGTACCTCTTCCTCTTCCAAACCTATTAATCCTGCTACTAGTACTAACACTAATCCATACCCGAATCCGAATCCGAATTCGAATCCGAATAATAACAACCATGATTATAATGCGAGCGATTTAAGCGCGCAATCGTCCGCTGGTCTCCAAAAAGAGGAGGACGACCATCTTCTTCAGTTTCAGATTGAGGACGAGTTCGACATTTCTGGTTTGAAGCTCATCCAAGTTCCCAAGCGGGCCCACCACTTCAGAGCTACCCATAATCCACCACCACCACCACCACCACCACCCATTATGGAAAAGAAGTATACTCCTGCAATTGATATCTGGAGCATAGGATGCATATTTGCAGAAATACTCACTGGAAAACCCCTGTTTCCTGGGAAAAACGTGGTGCACCAATTGGATCTCATGACTGATTTGCTTGGCACGCCTTCTTCAGAATCCATTGCAAGGATTCGGAATGAAAAAGCAAGAAGGTATCTTAGTAGCATGCGAAAAAAACAACCAGTTCCCTTCACACATAAGTTCCCTAATGCAGATCCGTTGGCTCTTCGCCTGTTGGAGCAACTTCTTGCATTTGATCCCAAAGATCGTCCGACAGCTGAAGAGGCATTAGCTGATCCATACTTTCATGGTTTGGCAAATGTTGATCGTGAGCCGTCCACTCAACCCATTTCAAAACTTGAATTTGAGTTTGAGCGAAGGAAATTGACAAAAGATGATGTCAGAGAGTTGATTTACAGGGAGATTTTAGAGTATCATCCCCAGATGCTGCAGGAGTATCTTCGAGGGGGAGATCAAACGAGCAGCTTTATGTATCCTAGTGGTGTTGATCGATTCAAGCGACAGTTTGCACATCTTGAGGAACACTATGGTAAAGGTGAAAGGGGCACTCCTCCACTCCAAAGGCAGCATGCCTCCTTGCCCAGAGAGCGGGTTCCTGCACCCAAGGAGGATGCTGACCAAAGCAATGAATCGGAAAGGACTGCCGCTTCTGTTGCCACAACTCTTCACAGCCCTCCATCTGATGGCTCTGATAATCCAAATGCAAATGGACCTAGCAAGACACAGTACACTCCAGTATCTAGTCGCAGCCTGTTGAAGAGTGCCAGCATCAGTGCTTCCAAGTGTATAGGTGTAGTGAAAAAAGATTCGCAGGAGGATCCAATTGCTGAGGTCAACGATGAGTCAGTTGATGGTTTGGCCCAAAAGGTCGAAGCTCTTCGTGCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04016 map04016
Pfam Domains
Protein Families
Pkinase

Protein Analysis

428

Amino Acids

47.79

Weight (kDa)

6.38

Isoelectric Point (pI)

51.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 115 - 228 1.2e-14 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0033173)

Species Orthologous Gene IDs
rosa_samantha Rh7BG016800 Rh7DG017400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 159
AccB7I CCANNNNNTGG 1 cut(s) 1082
AccBSI CCGCTC 1 cut(s) 988
AccI GTMKAC 1 cut(s) 359
AccII CGCG 1 cut(s) 179
AciI CCGC 4 cut(s) 189, 286, 988, 1044
AclWI GGATC 6 cut(s) 465, 587, 629, 668, 1211, 1224
AcsI RAATTY 2 cut(s) 127, 740
AcuI CTGAAG 4 cut(s) 209, 283, 474, 678
AfaI GTAC 3 cut(s) 55, 94, 1127
AfiI CCNNNNNNNGG 4 cut(s) 205, 504, 987, 1082
AgsI TTSAA 6 cut(s) 47, 265, 732, 740, 895, 1156
AhlI ACTAGT 1 cut(s) 89
AjnI CCWGG 1 cut(s) 430
AluBI AGCT 6 cut(s) 268, 305, 656, 671, 864, 1274
AluI AGCT 6 cut(s) 268, 305, 656, 671, 864, 1274
Alw21I GWGCWC 1 cut(s) 450
Alw26I GTCTC 1 cut(s) 200
Alw44I GTGCAC 1 cut(s) 446
AlwI GGATC 6 cut(s) 465, 587, 629, 668, 1211, 1224
AlwNI CAGNNNCTG 1 cut(s) 826
AoxI GGCC 2 cut(s) 288, 1257
ApaI GGGCCC 1 cut(s) 292
ApaLI GTGCAC 1 cut(s) 446
ApeKI GCWGC 4 cut(s) 826, 861, 964, 1146
ApoI RAATTY 2 cut(s) 127, 740
AseI ATTAAT 1 cut(s) 78
Asp700I GAANNNNTTC 1 cut(s) 1275
AspLEI GCGC 2 cut(s) 179, 181
AspS9I GGNCC 4 cut(s) 288, 289, 1109, 1258
AsuHPI GGTGA 1 cut(s) 947
AsuII TTCGAA 1 cut(s) 131
AvaII GGWCC 1 cut(s) 1109
BaeGI GKGCMC 3 cut(s) 292, 450, 947
BaeI ACNNNNGTAYC 2 cut(s) 1119, 1152
BamHI GGATCC 1 cut(s) 1216
BanII GRGCYC 1 cut(s) 292
Bbv12I GWGCWC 1 cut(s) 450
BbvCI CCTCAGC 1 cut(s) 1227
BbvI GCAGC 4 cut(s) 813, 873, 976, 1158
BccI CCATC 4 cut(s) 225, 1076, 1084, 1244
BceAI ACGGC 1 cut(s) 697
BciT130I CCWGG 1 cut(s) 432
BciVI GTATCC 1 cut(s) 882
BcoDI GTCTC 1 cut(s) 200
BcuI ACTAGT 1 cut(s) 89
BfaI CTAG 4 cut(s) 90, 876, 1113, 1140
BfmI CTRYAG 1 cut(s) 827
BfuI GTATCC 1 cut(s) 882
BisI GCNGC 5 cut(s) 827, 862, 965, 1044, 1147
BlsI GCNGC 5 cut(s) 828, 863, 966, 1045, 1148
BmcAI AGTACT 1 cut(s) 94
Bme1390I CCNGG 1 cut(s) 432
Bme18I GGWCC 1 cut(s) 1109
BmgT120I GGNCC 4 cut(s) 288, 289, 1109, 1258
BmiI GGNNCC 3 cut(s) 290, 993, 1218
BmrFI CCNGG 1 cut(s) 432
BmsI GCATC 4 cut(s) 380, 813, 1000, 1176
BpmI CTGGAG 2 cut(s) 400, 1116
Bpu10I CCTNAGC 1 cut(s) 1227
Bpu14I TTCGAA 1 cut(s) 131
BpuEI CTTGAG 1 cut(s) 935
Bsa29I ATCGAT 1 cut(s) 889
BsaI GGTCTC 1 cut(s) 200
BsaJI CCNNGG 3 cut(s) 18, 431, 1002
Bsc4I CCNNNNNNNGG 4 cut(s) 205, 504, 987, 1082
Bse1I ACTGG 3 cut(s) 418, 560, 1133
Bse3DI GCAATG 2 cut(s) 498, 1030
BseBI CCWGG 1 cut(s) 432
BseCI ATCGAT 1 cut(s) 889
BseDI CCNNGG 3 cut(s) 18, 431, 1002
BseGI GGATG 4 cut(s) 270, 395, 814, 1015
BseLI CCNNNNNNNGG 4 cut(s) 205, 504, 987, 1082
BseMI GCAATG 2 cut(s) 498, 1030
BseMII CTCAG 1 cut(s) 1218
BseNI ACTGG 3 cut(s) 418, 560, 1133
BsePI GCGCGC 1 cut(s) 177
BseRI GAGGAG 2 cut(s) 221, 939
BseSI GKGCMC 3 cut(s) 292, 450, 947
BseXI GCAGC 4 cut(s) 813, 873, 976, 1158
BsgI GTGCAG 1 cut(s) 981
Bsh1236I CGCG 1 cut(s) 179
BshFI GGCC 2 cut(s) 290, 1259
BshVI ATCGAT 1 cut(s) 889
BsiHKAI GWGCWC 1 cut(s) 450
BslI CCNNNNNNNGG 4 cut(s) 205, 504, 987, 1082
BsmAI GTCTC 1 cut(s) 200
BsnI GGCC 2 cut(s) 290, 1259
Bso31I GGTCTC 1 cut(s) 200
Bsp119I TTCGAA 1 cut(s) 131
Bsp120I GGGCCC 1 cut(s) 288
Bsp1286I GDGCHC 3 cut(s) 292, 450, 947
Bsp143I GATC 9 cut(s) 457, 592, 634, 643, 673, 703, 850, 886, 1216
BspACI CCGC 4 cut(s) 189, 286, 988, 1044
BspANI GGCC 2 cut(s) 290, 1259
BspCNI CTCAG 1 cut(s) 1219
BspDI ATCGAT 1 cut(s) 889
BspFNI CGCG 1 cut(s) 179
BspHI TCATGA 1 cut(s) 462
BspLI GGNNCC 3 cut(s) 290, 993, 1218
BspMAI CTGCAG 1 cut(s) 831
BspPI GGATC 6 cut(s) 465, 587, 629, 668, 1211, 1224
BspQI GCTCTTC 2 cut(s) 609, 1281
BspT104I TTCGAA 1 cut(s) 131
BspTNI GGTCTC 1 cut(s) 200
BsrBI CCGCTC 1 cut(s) 988
BsrDI GCAATG 2 cut(s) 498, 1030
BsrI ACTGG 3 cut(s) 418, 560, 1133
BssECI CCNNGG 3 cut(s) 18, 431, 1002
BssHII GCGCGC 1 cut(s) 177
BssMI GATC 9 cut(s) 457, 592, 634, 643, 673, 703, 850, 886, 1216
BssNAI GTATAC 1 cut(s) 360
BssT1I CCWWGG 2 cut(s) 18, 1002
Bst1107I GTATAC 1 cut(s) 360
Bst2UI CCWGG 1 cut(s) 432
Bst4CI ACNGT 3 cut(s) 29, 903, 1125
Bst6I CTCTTC 7 cut(s) 64, 70, 609, 654, 1068, 1151, 1281
BstAPI GCANNNNNTGC 1 cut(s) 390
BstBI TTCGAA 1 cut(s) 131
BstC8I GCNNGC 7 cut(s) 166, 179, 288, 482, 545, 969, 1165
BstDEI CTNAG 2 cut(s) 536, 1227
BstF5I GGATG 4 cut(s) 270, 395, 814, 1015
BstFNI CGCG 1 cut(s) 179
BstHHI GCGC 2 cut(s) 179, 181
BstKTI GATC 9 cut(s) 460, 595, 637, 646, 676, 706, 853, 889, 1219
BstMAI GTCTC 1 cut(s) 200
BstMBI GATC 9 cut(s) 457, 592, 634, 643, 673, 703, 850, 886, 1216
BstMWI GCNNNNNNNGC 7 cut(s) 174, 390, 481, 662, 985, 1052, 1280
BstNI CCWGG 1 cut(s) 432
BstNSI RCATGY 2 cut(s) 547, 971
BstSCI CCNGG 1 cut(s) 430
BstSFI CTRYAG 1 cut(s) 827
BstSLI GKGCMC 3 cut(s) 292, 450, 947
BstUI CGCG 1 cut(s) 179
BstV1I GCAGC 4 cut(s) 813, 873, 976, 1158
BstX2I RGATCY 3 cut(s) 457, 592, 1216
BstYI RGATCY 3 cut(s) 457, 592, 1216
BstZ17I GTATAC 1 cut(s) 360
Bsu15I ATCGAT 1 cut(s) 889
BsuI GTATCC 1 cut(s) 882
BsuRI GGCC 2 cut(s) 290, 1259
BsuTUI ATCGAT 1 cut(s) 889
BtsCI GGATG 4 cut(s) 270, 395, 814, 1015
BtsIMutI CAGTG 2 cut(s) 411, 1177
Cac8I GCNNGC 7 cut(s) 166, 179, 288, 482, 545, 969, 1165
CaiI CAGNNNCTG 1 cut(s) 826
CciI TCATGA 1 cut(s) 462
CfoI GCGC 2 cut(s) 179, 181
Cfr13I GGNCC 4 cut(s) 288, 289, 1109, 1258
ClaI ATCGAT 1 cut(s) 889
Csp6I GTAC 3 cut(s) 54, 93, 1126
CspCI CAANNNNNGTGG 1 cut(s) 38
CviAII CATG 5 cut(s) 152, 463, 544, 686, 968
CviQI GTAC 3 cut(s) 54, 93, 1126
DdeI CTNAG 2 cut(s) 536, 1227
DpnI GATC 9 cut(s) 459, 594, 636, 645, 675, 705, 852, 888, 1218
DpnII GATC 9 cut(s) 457, 592, 634, 643, 673, 703, 850, 886, 1216
Eam1104I CTCTTC 7 cut(s) 64, 70, 609, 654, 1068, 1151, 1281
EarI CTCTTC 7 cut(s) 64, 70, 609, 654, 1068, 1151, 1281
Eco130I CCWWGG 2 cut(s) 18, 1002
Eco24I GRGCYC 1 cut(s) 292
Eco31I GGTCTC 1 cut(s) 200
Eco32I GATATC 1 cut(s) 376
Eco47I GGWCC 1 cut(s) 1109
Eco57I CTGAAG 4 cut(s) 209, 283, 474, 678
EcoRI GAATTC 1 cut(s) 127
EcoRII CCWGG 1 cut(s) 430
EcoRV GATATC 1 cut(s) 376
EcoT14I CCWWGG 2 cut(s) 18, 1002
EcoT22I ATGCAT 1 cut(s) 395
EcoT38I GRGCYC 1 cut(s) 292
ErhI CCWWGG 2 cut(s) 18, 1002
FaeI CATG 5 cut(s) 155, 466, 547, 689, 971
FatI CATG 5 cut(s) 151, 462, 543, 685, 967
FauI CCCGC 2 cut(s) 279, 981
FblI GTMKAC 1 cut(s) 359
Fnu4HI GCNGC 5 cut(s) 827, 862, 965, 1044, 1147
FokI GGATG 4 cut(s) 257, 402, 801, 1022
FriOI GRGCYC 1 cut(s) 292
Fsp4HI GCNGC 5 cut(s) 827, 862, 965, 1044, 1147
FspBI CTAG 4 cut(s) 90, 876, 1113, 1140
GlaI GCGC 2 cut(s) 178, 180
GluI GCNGC 5 cut(s) 827, 862, 965, 1044, 1147
GsuI CTGGAG 2 cut(s) 400, 1116
HaeIII GGCC 2 cut(s) 290, 1259
HhaI GCGC 2 cut(s) 179, 181
Hin1II CATG 5 cut(s) 155, 466, 547, 689, 971
Hin6I GCGC 2 cut(s) 177, 179
HinP1I GCGC 2 cut(s) 177, 179
HincII GTYRAC 1 cut(s) 1234
HindII GTYRAC 1 cut(s) 1234
HinfI GANTC 9 cut(s) 115, 121, 133, 494, 508, 891, 1028, 1205, 1241
HphI GGTGA 1 cut(s) 947
Hpy166II GTNNAC 6 cut(s) 25, 360, 448, 717, 1128, 1234
Hpy188III TCNNGA 4 cut(s) 379, 463, 707, 914
Hpy8I GTNNAC 6 cut(s) 25, 360, 448, 717, 1128, 1234
Hpy99I CGWCG 2 cut(s) 39, 54
HpyAV CCTTC 4 cut(s) 495, 522, 577, 750
HpyCH4III ACNGT 3 cut(s) 29, 903, 1125
HpyCH4IV ACGT 2 cut(s) 49, 441
HpyF10VI GCNNNNNNNGC 7 cut(s) 174, 390, 481, 662, 985, 1052, 1280
HpyF3I CTNAG 2 cut(s) 536, 1227
HpySE526I ACGT 2 cut(s) 49, 441
Hsp92II CATG 5 cut(s) 155, 466, 547, 689, 971
HspAI GCGC 2 cut(s) 177, 179
Kzo9I GATC 9 cut(s) 457, 592, 634, 643, 673, 703, 850, 886, 1216
LguI GCTCTTC 2 cut(s) 609, 1281
LmnI GCTCC 3 cut(s) 11, 381, 616
Lsp1109I GCAGC 4 cut(s) 813, 873, 976, 1158
LweI GCATC 4 cut(s) 380, 813, 1000, 1176
MaeI CTAG 4 cut(s) 90, 876, 1113, 1140
MaeII ACGT 2 cut(s) 49, 441
MalI GATC 9 cut(s) 459, 594, 636, 645, 675, 705, 852, 888, 1218
MbiI CCGCTC 1 cut(s) 988
MboI GATC 9 cut(s) 457, 592, 634, 643, 673, 703, 850, 886, 1216
MfeI CAATTG 3 cut(s) 369, 452, 1221
MflI RGATCY 3 cut(s) 457, 592, 1216
MhlI GDGCHC 3 cut(s) 292, 450, 947
MluCI AATT 6 cut(s) 127, 369, 452, 740, 761, 1221
MlyI GAGTC 1 cut(s) 1250
MmeI TCCRAC 2 cut(s) 594, 674
Mph1103I ATGCAT 1 cut(s) 395
MroXI GAANNNNTTC 1 cut(s) 1275
MseI TTAA 2 cut(s) 78, 173
MspA1I CMGCKG 2 cut(s) 191, 656
MspR9I CCNGG 1 cut(s) 432
MunI CAATTG 3 cut(s) 369, 452, 1221
MvaI CCWGG 1 cut(s) 432
MvnI CGCG 1 cut(s) 179
MwoI GCNNNNNNNGC 7 cut(s) 174, 390, 481, 662, 985, 1052, 1280
NdeII GATC 9 cut(s) 457, 592, 634, 643, 673, 703, 850, 886, 1216
NlaIII CATG 5 cut(s) 155, 466, 547, 689, 971
NlaIV GGNNCC 3 cut(s) 290, 993, 1218
NsiI ATGCAT 1 cut(s) 395
NspI RCATGY 2 cut(s) 547, 971
NspV TTCGAA 1 cut(s) 131
PaeI GCATGC 2 cut(s) 547, 971
PagI TCATGA 1 cut(s) 462
PauI GCGCGC 1 cut(s) 177
PciSI GCTCTTC 2 cut(s) 609, 1281
PcsI WCGNNNNNNNCGW 1 cut(s) 895
PdmI GAANNNNTTC 1 cut(s) 1275
PfeI GAWTC 8 cut(s) 115, 121, 133, 494, 508, 891, 1028, 1205
PflMI CCANNNNNTGG 1 cut(s) 1082
PkrI GCNGC 5 cut(s) 828, 863, 966, 1045, 1148
PleI GAGTC 1 cut(s) 1249
PpsI GAGTC 1 cut(s) 1249
PshBI ATTAAT 1 cut(s) 78
PsiI TTATAA 1 cut(s) 159
Psp6I CCWGG 1 cut(s) 430
PspGI CCWGG 1 cut(s) 430
PspN4I GGNNCC 3 cut(s) 290, 993, 1218
PspOMI GGGCCC 1 cut(s) 288
PspPI GGNCC 4 cut(s) 288, 289, 1109, 1258
PstI CTGCAG 1 cut(s) 831
PstNI CAGNNNCTG 1 cut(s) 826
PsuI RGATCY 3 cut(s) 457, 592, 1216
PteI GCGCGC 1 cut(s) 177
PvuII CAGCTG 1 cut(s) 656
RsaI GTAC 3 cut(s) 55, 94, 1127
RsaNI GTAC 3 cut(s) 54, 93, 1126
SapI GCTCTTC 2 cut(s) 609, 1281
SaqAI TTAA 2 cut(s) 78, 173
SatI GCNGC 5 cut(s) 827, 862, 965, 1044, 1147
Sau3AI GATC 9 cut(s) 457, 592, 634, 643, 673, 703, 850, 886, 1216
Sau96I GGNCC 4 cut(s) 288, 289, 1109, 1258
ScaI AGTACT 1 cut(s) 94
SchI GAGTC 1 cut(s) 1250
ScrFI CCNGG 1 cut(s) 432
SduI GDGCHC 3 cut(s) 292, 450, 947
SfaNI GCATC 4 cut(s) 380, 813, 1000, 1176
SfcI CTRYAG 1 cut(s) 827
SfuI TTCGAA 1 cut(s) 131
SinI GGWCC 1 cut(s) 1109
SmlI CTYRAG 1 cut(s) 914
SmoI CTYRAG 1 cut(s) 914
SpeI ACTAGT 1 cut(s) 89
SphI GCATGC 2 cut(s) 547, 971
Sse9I AATT 6 cut(s) 127, 369, 452, 740, 761, 1221
SsiI CCGC 4 cut(s) 189, 286, 988, 1044
SspMI CTAG 4 cut(s) 90, 876, 1113, 1140
StyD4I CCNGG 1 cut(s) 430
StyI CCWWGG 2 cut(s) 18, 1002
TaaI ACNGT 3 cut(s) 29, 903, 1125
TaiI ACGT 2 cut(s) 52, 444
TaqI TCGA 5 cut(s) 131, 249, 841, 889, 1269
TasI AATT 6 cut(s) 127, 369, 452, 740, 761, 1221
TatI WGTACW 2 cut(s) 92, 1125
TauI GCSGC 1 cut(s) 1046
TfiI GAWTC 8 cut(s) 115, 121, 133, 494, 508, 891, 1028, 1205
Tru1I TTAA 2 cut(s) 78, 173
Tru9I TTAA 2 cut(s) 78, 173
TscAI CASTG 2 cut(s) 418, 1177
TseI GCWGC 4 cut(s) 826, 861, 964, 1146
TspDTI ATGAA 3 cut(s) 531, 674, 1041
TspGWI ACGGA 1 cut(s) 585
TspRI CASTG 2 cut(s) 418, 1177
Van91I CCANNNNNTGG 1 cut(s) 1082
VneI GTGCAC 1 cut(s) 446
VpaK11BI GGWCC 1 cut(s) 1109
VspI ATTAAT 1 cut(s) 78
XapI RAATTY 2 cut(s) 127, 740
XceI RCATGY 2 cut(s) 547, 971
XmiI GTMKAC 1 cut(s) 359
XmnI GAANNNNTTC 1 cut(s) 1275
XspI CTAG 4 cut(s) 90, 876, 1113, 1140
ZrmI AGTACT 1 cut(s) 94
Zsp2I ATGCAT 1 cut(s) 395
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.