Rh7BG423200

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
Physical Location & Seq
Reverse (-)
48193972 .. 48194286
315 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG423200.1

Sequence Viewer

Length: 315 bp
ATGGGTATTTTGGTCATTTCCTTATCTATCTCCTCCACCAAAGCAGAGTTGCAGATCCCATCTCTCTCCTCCATCGCCTCTTTGGTCTCCGATTCTCTCTCTTTCATTCGTTATCTTCTTCCTGTAGATTATTTAAAGCTCAGAAGCTCCGATCAAGCGGAGCAAGCGGGTCAGGACATTCCGCAAGGTCATCAGCCTCCGAGCAGCAACCAAAATCGCTTCCAACAATGGCATTTGCAAGCTCAAGCCCAACGCCAAAGCCACCAAAGAGGAATACAATTTCGAAAAAATGGAGGATCTCAAAGCCAAGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

104

Amino Acids

11.57

Weight (kDa)

9.39

Isoelectric Point (pI)

61.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0020741)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 158, 167, 182
AclWI GGATC 2 cut(s) 49, 304
AluBI AGCT 3 cut(s) 139, 147, 242
AluI AGCT 3 cut(s) 139, 147, 242
Alw26I GTCTC 1 cut(s) 91
AlwI GGATC 2 cut(s) 49, 304
ApeKI GCWGC 1 cut(s) 204
AsuII TTCGAA 1 cut(s) 283
BbvI GCAGC 1 cut(s) 216
BccI CCATC 2 cut(s) 67, 80
BcoDI GTCTC 1 cut(s) 91
BfmI CTRYAG 1 cut(s) 123
BisI GCNGC 1 cut(s) 205
BlsI GCNGC 1 cut(s) 206
Bpu14I TTCGAA 1 cut(s) 283
BpuEI CTTGAG 1 cut(s) 228
BsaI GGTCTC 1 cut(s) 91
BseMII CTCAG 1 cut(s) 154
BseRI GAGGAG 2 cut(s) 22, 58
BseXI GCAGC 1 cut(s) 216
BsmAI GTCTC 1 cut(s) 91
Bso31I GGTCTC 1 cut(s) 91
Bsp119I TTCGAA 1 cut(s) 283
Bsp143I GATC 3 cut(s) 54, 151, 296
BspACI CCGC 3 cut(s) 158, 167, 182
BspCNI CTCAG 1 cut(s) 153
BspPI GGATC 2 cut(s) 49, 304
BspT104I TTCGAA 1 cut(s) 283
BspTNI GGTCTC 1 cut(s) 91
BssMI GATC 3 cut(s) 54, 151, 296
BstBI TTCGAA 1 cut(s) 283
BstC8I GCNNGC 2 cut(s) 165, 240
BstDEI CTNAG 1 cut(s) 140
BstKTI GATC 3 cut(s) 57, 154, 299
BstMAI GTCTC 1 cut(s) 91
BstMBI GATC 3 cut(s) 54, 151, 296
BstMWI GCNNNNNNNGC 1 cut(s) 164
BstSFI CTRYAG 1 cut(s) 123
BstV1I GCAGC 1 cut(s) 216
BstX2I RGATCY 2 cut(s) 54, 296
BstYI RGATCY 2 cut(s) 54, 296
BtgZI GCGATG 1 cut(s) 58
Cac8I GCNNGC 2 cut(s) 165, 240
CviJI RGCY 7 cut(s) 139, 147, 196, 242, 248, 261, 306
CviKI_1 RGCY 7 cut(s) 139, 147, 196, 242, 248, 261, 306
DdeI CTNAG 1 cut(s) 140
DpnI GATC 3 cut(s) 56, 153, 298
DpnII GATC 3 cut(s) 54, 151, 296
DraI TTTAAA 1 cut(s) 135
Eco31I GGTCTC 1 cut(s) 91
FauI CCCGC 1 cut(s) 160
Fnu4HI GCNGC 1 cut(s) 205
Fsp4HI GCNGC 1 cut(s) 205
GluI GCNGC 1 cut(s) 205
HinfI GANTC 1 cut(s) 92
Hpy188I TCNGA 4 cut(s) 91, 143, 151, 201
Hpy188III TCNNGA 1 cut(s) 173
HpyCH4V TGCA 2 cut(s) 52, 238
HpyF10VI GCNNNNNNNGC 1 cut(s) 164
HpyF3I CTNAG 1 cut(s) 140
Kzo9I GATC 3 cut(s) 54, 151, 296
LmnI GCTCC 2 cut(s) 152, 160
LpnPI CCDG 2 cut(s) 135, 158
Lsp1109I GCAGC 1 cut(s) 216
MalI GATC 3 cut(s) 56, 153, 298
MboI GATC 3 cut(s) 54, 151, 296
MboII GAAGA 2 cut(s) 107, 110
MflI RGATCY 2 cut(s) 54, 296
MluCI AATT 1 cut(s) 278
MmeI TCCRAC 1 cut(s) 247
MnlI CCTC 6 cut(s) 43, 79, 88, 207, 263, 287
MseI TTAA 1 cut(s) 134
MwoI GCNNNNNNNGC 1 cut(s) 164
NdeII GATC 3 cut(s) 54, 151, 296
NspV TTCGAA 1 cut(s) 283
PfeI GAWTC 1 cut(s) 92
PkrI GCNGC 1 cut(s) 206
PsuI RGATCY 2 cut(s) 54, 296
SaqAI TTAA 1 cut(s) 134
SatI GCNGC 1 cut(s) 205
Sau3AI GATC 3 cut(s) 54, 151, 296
SetI ASST 4 cut(s) 141, 149, 190, 244
SfcI CTRYAG 1 cut(s) 123
SfuI TTCGAA 1 cut(s) 283
SgeI CNNG 9 cut(s) 134, 167, 176, 180, 185, 197, 213, 251, 257
SmlI CTYRAG 1 cut(s) 243
SmoI CTYRAG 1 cut(s) 243
Sse9I AATT 1 cut(s) 278
SsiI CCGC 3 cut(s) 158, 167, 182
TaqI TCGA 1 cut(s) 283
TasI AATT 1 cut(s) 278
TfiI GAWTC 1 cut(s) 92
Tru1I TTAA 1 cut(s) 134
Tru9I TTAA 1 cut(s) 134
TseI GCWGC 1 cut(s) 204
TspDTI ATGAA 1 cut(s) 94
XcmI CCANNNNNNNNNTGG 1 cut(s) 79
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.