Rh7DG150200

Anthocyanidin reductase-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Reverse (-)
12932801 .. 12933382
582 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG150200.1

Sequence Viewer

Length: 471 bp
ATGTCCCCAAGAAGAGAAGATGGAGTTGGATTTAAAGCCTGCCTTGACGAGTCATGTTTGACACCACTTGATGCCTCGTATACTTATGGCAATGCTTTCACAGTGGGATATCTTAAATCGAAGATCTTCGCTGAGAAAGCAGTGCTGAGCTATAACGGCTTTGATCATGGGATTTTAGAAGTGGTAACTCTTCCTTGTGGCTTAGTGGGAGGAGAAACTCTTCTTTCATATTTGCCTATAAGCGTGGGAGCGATTCTGTTGCAACTTACTGGGGACTTATTTTCTGGCAATTCATTAAACCTTCTGCAAGAATGTATCGGATTGGTTCCTATAGCGCACGTTAATGATATTTGCCAAGCCCATATTTTCTGCATGGAACAACTATCAATGAGAGGTAGATTCTGTTGTGCAGTTTCCGGTCTCTCTATCAAAGAAATGGCAATGTTCTTCCAAAAGACTTACCCTGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

156

Amino Acids

16.96

Weight (kDa)

5.12

Isoelectric Point (pI)

38.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0025153)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr7g0195231
rosa_multiflora Rmu_sc0002381.1_g000009
rosa_samantha Rh7DG150200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 80
AjuI GAANNNNNNNTTGG 2 cut(s) 9, 41
AluBI AGCT 1 cut(s) 150
AluI AGCT 1 cut(s) 150
Alw26I GTCTC 1 cut(s) 425
Asp700I GAANNNNTTC 2 cut(s) 125, 219
AspLEI GCGC 1 cut(s) 337
BccI CCATC 1 cut(s) 14
BceAI ACGGC 1 cut(s) 172
BcgI CGANNNNNNTGC 2 cut(s) 241, 275
BclI TGATCA 1 cut(s) 163
BcoDI GTCTC 1 cut(s) 425
BfmI CTRYAG 1 cut(s) 330
BglII AGATCT 1 cut(s) 123
BlpI GCTNAGC 1 cut(s) 146
BmiI GGNNCC 1 cut(s) 327
BmrI ACTGGG 1 cut(s) 279
BmsI GCATC 1 cut(s) 61
BmuI ACTGGG 1 cut(s) 279
Bpu1102I GCTNAGC 1 cut(s) 146
BsaI GGTCTC 1 cut(s) 425
BsaWI WCCGGW 1 cut(s) 416
Bse1I ACTGG 1 cut(s) 274
Bse3DI GCAATG 2 cut(s) 97, 447
BseMI GCAATG 2 cut(s) 97, 447
BseMII CTCAG 2 cut(s) 123, 137
BseNI ACTGG 1 cut(s) 274
BseRI GAGGAG 1 cut(s) 225
BsgI GTGCAG 1 cut(s) 429
BsiSI CCGG 1 cut(s) 417
BslFI GGGAC 1 cut(s) 287
BsmAI GTCTC 1 cut(s) 425
BsmFI GGGAC 1 cut(s) 287
Bso31I GGTCTC 1 cut(s) 425
Bsp143I GATC 2 cut(s) 123, 163
Bsp1720I GCTNAGC 1 cut(s) 146
BspCNI CTCAG 2 cut(s) 124, 138
BspLI GGNNCC 1 cut(s) 327
BspTNI GGTCTC 1 cut(s) 425
BsrDI GCAATG 2 cut(s) 97, 447
BsrI ACTGG 1 cut(s) 274
BssMI GATC 2 cut(s) 123, 163
BssNAI GTATAC 1 cut(s) 81
Bst1107I GTATAC 1 cut(s) 81
Bst4CI ACNGT 1 cut(s) 103
Bst6I CTCTTC 3 cut(s) 7, 195, 225
BstC8I GCNNGC 1 cut(s) 40
BstDEI CTNAG 3 cut(s) 132, 146, 202
BstHHI GCGC 1 cut(s) 337
BstKTI GATC 2 cut(s) 126, 166
BstMAI GTCTC 1 cut(s) 425
BstMBI GATC 2 cut(s) 123, 163
BstMWI GCNNNNNNNGC 2 cut(s) 137, 156
BstSFI CTRYAG 1 cut(s) 330
BstX2I RGATCY 1 cut(s) 123
BstYI RGATCY 1 cut(s) 123
BstZ17I GTATAC 1 cut(s) 81
BtsI GCAGTG 1 cut(s) 147
BtsIMutI CAGTG 2 cut(s) 108, 147
Cac8I GCNNGC 1 cut(s) 40
CfoI GCGC 1 cut(s) 337
CviAII CATG 3 cut(s) 54, 167, 373
CviJI RGCY 5 cut(s) 38, 150, 159, 201, 359
CviKI_1 RGCY 5 cut(s) 38, 150, 159, 201, 359
DdeI CTNAG 3 cut(s) 132, 146, 202
DpnI GATC 2 cut(s) 125, 165
DpnII GATC 2 cut(s) 123, 163
DraI TTTAAA 1 cut(s) 34
Eam1104I CTCTTC 3 cut(s) 7, 195, 225
EarI CTCTTC 3 cut(s) 7, 195, 225
Eco31I GGTCTC 1 cut(s) 425
Eco32I GATATC 1 cut(s) 110
EcoRV GATATC 1 cut(s) 110
FaeI CATG 3 cut(s) 57, 170, 376
FalI AAGNNNNNCTT 2 cut(s) 27, 59
FaqI GGGAC 1 cut(s) 287
FatI CATG 3 cut(s) 53, 166, 372
FbaI TGATCA 1 cut(s) 163
FblI GTMKAC 1 cut(s) 80
GlaI GCGC 1 cut(s) 336
HapII CCGG 1 cut(s) 417
HhaI GCGC 1 cut(s) 337
Hin1II CATG 3 cut(s) 57, 170, 376
Hin6I GCGC 1 cut(s) 335
HinP1I GCGC 1 cut(s) 335
HinfI GANTC 3 cut(s) 50, 253, 399
HpaII CCGG 1 cut(s) 417
Hpy166II GTNNAC 1 cut(s) 81
Hpy188I TCNGA 1 cut(s) 320
Hpy8I GTNNAC 1 cut(s) 81
HpyAV CCTTC 1 cut(s) 311
HpyCH4III ACNGT 1 cut(s) 103
HpyCH4IV ACGT 1 cut(s) 339
HpyCH4V TGCA 4 cut(s) 262, 307, 372, 410
HpyF10VI GCNNNNNNNGC 2 cut(s) 137, 156
HpyF3I CTNAG 3 cut(s) 132, 146, 202
HpySE526I ACGT 1 cut(s) 339
Hsp92II CATG 3 cut(s) 57, 170, 376
HspAI GCGC 1 cut(s) 335
Ksp22I TGATCA 1 cut(s) 163
Kzo9I GATC 2 cut(s) 123, 163
LmnI GCTCC 1 cut(s) 248
LpnPI CCDG 4 cut(s) 52, 255, 270, 430
LweI GCATC 1 cut(s) 61
MaeII ACGT 1 cut(s) 339
MaeIII GTNAC 1 cut(s) 184
MalI GATC 2 cut(s) 125, 165
MboI GATC 2 cut(s) 123, 163
MboII GAAGA 7 cut(s) 24, 29, 118, 133, 182, 212, 439
MflI RGATCY 1 cut(s) 123
MluCI AATT 1 cut(s) 289
MlyI GAGTC 1 cut(s) 59
MmeI TCCRAC 1 cut(s) 7
MnlI CCTC 3 cut(s) 85, 203, 386
MroXI GAANNNNTTC 2 cut(s) 125, 219
MseI TTAA 4 cut(s) 33, 114, 296, 342
MslI CAYNNNNRTG 1 cut(s) 342
MspI CCGG 1 cut(s) 417
MwoI GCNNNNNNNGC 2 cut(s) 137, 156
NdeII GATC 2 cut(s) 123, 163
NlaIII CATG 3 cut(s) 57, 170, 376
NlaIV GGNNCC 1 cut(s) 327
PdmI GAANNNNTTC 2 cut(s) 125, 219
PfeI GAWTC 2 cut(s) 253, 399
PleI GAGTC 1 cut(s) 58
PpsI GAGTC 1 cut(s) 58
PspN4I GGNNCC 1 cut(s) 327
PsuI RGATCY 1 cut(s) 123
RseI CAYNNNNRTG 1 cut(s) 342
SaqAI TTAA 4 cut(s) 33, 114, 296, 342
Sau3AI GATC 2 cut(s) 123, 163
SchI GAGTC 1 cut(s) 59
SetI ASST 4 cut(s) 152, 303, 342, 397
SfaNI GCATC 1 cut(s) 61
SfcI CTRYAG 1 cut(s) 330
SmiMI CAYNNNNRTG 1 cut(s) 342
Sse9I AATT 1 cut(s) 289
TaaI ACNGT 1 cut(s) 103
TaiI ACGT 1 cut(s) 342
TaqI TCGA 1 cut(s) 119
TasI AATT 1 cut(s) 289
TfiI GAWTC 2 cut(s) 253, 399
Tru1I TTAA 4 cut(s) 33, 114, 296, 342
Tru9I TTAA 4 cut(s) 33, 114, 296, 342
TscAI CASTG 2 cut(s) 108, 147
TspDTI ATGAA 2 cut(s) 216, 282
TspRI CASTG 2 cut(s) 108, 147
XmiI GTMKAC 1 cut(s) 80
XmnI GAANNNNTTC 2 cut(s) 125, 219
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.