Rh7DG247800

molybdenum cofactor sulfurtransferase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0014748
Physical Location & Seq
Forward (+)
25595419 .. 25597475
2057 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG247800.1

Sequence Viewer

Length: 1203 bp
ATGTCGAAGAATGTTGAGCAGAGAATTGTCTGCGCTTGTTTCAGCTTTGCGTGTTTCAGTGTGGAATTTTCAATCAACTTGGAAAAAGTAGTGAGAATTGACATGGGGAGGAACACTGCTGAAATTGTTACAAAAGCAGGGGCTGAGGCTATGAAGGAAGGTCAATGCAAAAAATCCCTCTTTGCTTCTATATACAAACCAACAATAGAAGATGGCAGACCAAGAAGTATGGTTATCAAGAAAGTACATACCATGATTCCGCCTCACATTATTGCTGAAGCCATATCAACACTCCATGGTGATGGCCTAGATCTGAGATGGTCAGGCCCCATTACACCAGCTGAAAGGGAATATGTTCAGCAATATGTGTTGGCAAAGTACCCACATTATGCTGGTCTTGTTGAAGGAGAAAAGTTCGACTACTCTAGCATTTGCATCAATGAAGAATCTCCTGATCCGCTCACTCCTGATGATAAGAAAAGGTCACCATGGGGCACCACTTTGAGGGAGTCCCCATCACCATTCTCTGGAAGCAATCTTCCTGACTTGGACAGGACTCAGTTGGAGACATCAAGGTTGCTTGACATCCTCACCAAGAAATCCTCCTTTCCCGGAAGCTTCATCTCAATCCCTGAGGTGCAAGCTCGAAACAAGGTCTTGAAGCACTGTGGATTGCCTGATGATGAGTACCTTGTTCTCTTCACCCCAAACTATAGAGATGCCAAGGTGTTGGTAGCGGAGAGCTATCCATTCTATAGGGGGAACTACTACATGACTGTTATTGGAGGAGATGAAGAAGAAGAAGAAGTCATAAAAGACTTTGCCGGTTACAAGGATTCCAAAGTGATTGTGGCTCCAGAGTCTTGGTTGGATTTGAGGATCAAGGGTTCACAACTAAGCCAGTATTTCAGGAAGAAAAGCAAGCACAAGCTGAAAGGGCTCTTTTCTTATCCAGCATTTATAAATGGGATTCATCACTCACTGCATTGGATTTCAGAAGCTCACCGCAACTCATGGCATGTTCTTCTTGATGCAACTGCACTGGTCATTGGGGAGGACCACTTGAACCTCATGCTCCACAGGCCTGACTTTGTTCTGTGTAGTCTGGACAACTCTCATGGCCAGACTTCAAAGATCACCTGCCTTCTGGTCAGGAAAAAATCCTTCGATACTACAATGCCTCCACCACAGATCAGTGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

400

Amino Acids

45.25

Weight (kDa)

6.71

Isoelectric Point (pI)

45.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014748)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g21420 FvH4_5g21420
malus_domestica MD06G1028900.v1.1
prunus_persica Prupe.5G042900_v2.0.a1 Prupe.5G042900_v2.0.a1 Prupe.5G042900_v2.0.a1
pyrus_communis pycom06g02300
rosa_chinensis RchiOBHm_Chr7g0208851
rosa_laevigata RLG00000003192
rosa_multiflora Rmu_sc0023015.1_g000006
rosa_roxburghii Rroxscaffold_3G00250200
rosa_rugosa Rorug07G0106600
rosa_samantha Rh7AG241700 Rh7BG236300 Rh7CG256300 Rh7DG247800
rosa_wichuraiana Rw7G020470

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 962
AarI CACCTGC 1 cut(s) 1148
Acc36I ACCTGC 1 cut(s) 1148
AccB1I GGYRCC 1 cut(s) 494
AccB7I CCANNNNNTGG 1 cut(s) 527
AccBSI CCGCTC 1 cut(s) 460
AciI CCGC 4 cut(s) 260, 458, 737, 1006
AclWI GGATC 2 cut(s) 449, 887
AcoI YGGCCR 1 cut(s) 1120
AcsI RAATTY 1 cut(s) 65
AcuI CTGAAG 1 cut(s) 297
AfaI GTAC 3 cut(s) 246, 380, 689
AfiI CCNNNNNNNGG 2 cut(s) 504, 527
AgsI TTSAA 5 cut(s) 72, 404, 661, 1066, 1131
AloI GAACNNNNNNTCC 2 cut(s) 871, 903
AluBI AGCT 7 cut(s) 45, 341, 618, 644, 744, 931, 1001
AluI AGCT 7 cut(s) 45, 341, 618, 644, 744, 931, 1001
Alw26I GTCTC 1 cut(s) 560
AlwI GGATC 2 cut(s) 449, 887
AlwNI CAGNNNCTG 1 cut(s) 143
AoxI GGCC 4 cut(s) 304, 325, 1082, 1120
ApoI RAATTY 1 cut(s) 65
Asp700I GAANNNNTTC 1 cut(s) 354
AspLEI GCGC 1 cut(s) 35
AspS9I GGNCC 2 cut(s) 326, 1057
AsuC2I CCSGG 1 cut(s) 612
AsuHPI GGTGA 7 cut(s) 311, 477, 510, 583, 694, 995, 1129
AvaII GGWCC 1 cut(s) 1057
AxyI CCTNAGG 1 cut(s) 633
BaeGI GKGCMC 1 cut(s) 497
BalI TGGCCA 1 cut(s) 1122
BanI GGYRCC 1 cut(s) 494
BanII GRGCYC 1 cut(s) 942
BbvCI CCTCAGC 1 cut(s) 144
BccI CCATC 4 cut(s) 206, 296, 312, 523
BcnI CCSGG 1 cut(s) 612
BcoDI GTCTC 1 cut(s) 560
BfaI CTAG 2 cut(s) 308, 426
BfmI CTRYAG 2 cut(s) 712, 754
BfuAI ACCTGC 1 cut(s) 1148
BglII AGATCT 1 cut(s) 310
Bme1390I CCNGG 1 cut(s) 612
Bme18I GGWCC 1 cut(s) 1057
BmgT120I GGNCC 2 cut(s) 326, 1057
BmiI GGNNCC 3 cut(s) 328, 496, 855
BmrFI CCNGG 1 cut(s) 612
BmsI GCATC 3 cut(s) 444, 709, 1021
BpmI CTGGAG 1 cut(s) 840
Bpu10I CCTNAGC 1 cut(s) 144
BpuMI CCSGG 1 cut(s) 612
BsaJI CCNNGG 3 cut(s) 295, 488, 723
BsaXI ACNNNNNCTCC 2 cut(s) 1165, 1195
Bsc4I CCNNNNNNNGG 2 cut(s) 504, 527
Bse118I RCCGGY 1 cut(s) 824
Bse1I ACTGG 2 cut(s) 901, 1047
Bse21I CCTNAGG 1 cut(s) 633
BseDI CCNNGG 3 cut(s) 295, 488, 723
BseGI GGATG 1 cut(s) 585
BseLI CCNNNNNNNGG 2 cut(s) 504, 527
BseMII CTCAG 4 cut(s) 135, 305, 572, 624
BseNI ACTGG 2 cut(s) 901, 1047
BseRI GAGGAG 1 cut(s) 801
BseSI GKGCMC 1 cut(s) 497
BsgI GTGCAG 1 cut(s) 1023
BshFI GGCC 4 cut(s) 306, 327, 1084, 1122
BshNI GGYRCC 1 cut(s) 494
BsiSI CCGG 2 cut(s) 612, 825
BslFI GGGAC 1 cut(s) 496
BslI CCNNNNNNNGG 2 cut(s) 504, 527
BsmAI GTCTC 1 cut(s) 560
BsmFI GGGAC 1 cut(s) 496
BsnI GGCC 4 cut(s) 306, 327, 1084, 1122
Bsp1286I GDGCHC 2 cut(s) 497, 942
Bsp143I GATC 5 cut(s) 310, 454, 879, 1134, 1191
Bsp19I CCATGG 2 cut(s) 295, 488
BspACI CCGC 4 cut(s) 260, 458, 737, 1006
BspANI GGCC 4 cut(s) 306, 327, 1084, 1122
BspCNI CTCAG 4 cut(s) 136, 306, 571, 625
BspLI GGNNCC 3 cut(s) 328, 496, 855
BspMI ACCTGC 1 cut(s) 1148
BspPI GGATC 2 cut(s) 449, 887
BspT107I GGYRCC 1 cut(s) 494
BsrBI CCGCTC 1 cut(s) 460
BsrFI RCCGGY 1 cut(s) 824
BsrI ACTGG 2 cut(s) 901, 1047
BssAI RCCGGY 1 cut(s) 824
BssECI CCNNGG 3 cut(s) 295, 488, 723
BssMI GATC 5 cut(s) 310, 454, 879, 1134, 1191
BssT1I CCWWGG 3 cut(s) 295, 488, 723
Bst4CI ACNGT 2 cut(s) 668, 778
Bst6I CTCTTC 1 cut(s) 704
BstC8I GCNNGC 2 cut(s) 642, 923
BstDEI CTNAG 5 cut(s) 144, 314, 558, 633, 896
BstDSI CCRYGG 2 cut(s) 295, 488
BstEII GGTNACC 1 cut(s) 483
BstF5I GGATG 1 cut(s) 585
BstHHI GCGC 1 cut(s) 35
BstKTI GATC 5 cut(s) 313, 457, 882, 1137, 1194
BstMAI GTCTC 1 cut(s) 560
BstMBI GATC 5 cut(s) 310, 454, 879, 1134, 1191
BstMWI GCNNNNNNNGC 2 cut(s) 937, 1081
BstNSI RCATGY 1 cut(s) 1022
BstPI GGTNACC 1 cut(s) 483
BstSCI CCNGG 1 cut(s) 610
BstSFI CTRYAG 2 cut(s) 712, 754
BstSLI GKGCMC 1 cut(s) 497
BstX2I RGATCY 1 cut(s) 310
BstXI CCANNNNNNTGG 3 cut(s) 302, 730, 864
BstYI RGATCY 1 cut(s) 310
Bsu36I CCTNAGG 1 cut(s) 633
BsuRI GGCC 4 cut(s) 306, 327, 1084, 1122
BtgI CCRYGG 2 cut(s) 295, 488
BtsCI GGATG 1 cut(s) 585
BtsI GCAGTG 2 cut(s) 114, 980
BtsIMutI CAGTG 6 cut(s) 64, 114, 664, 980, 1040, 1201
BveI ACCTGC 1 cut(s) 1148
Cac8I GCNNGC 2 cut(s) 642, 923
CaiI CAGNNNCTG 1 cut(s) 143
CfoI GCGC 1 cut(s) 35
Cfr10I RCCGGY 1 cut(s) 824
Cfr13I GGNCC 2 cut(s) 326, 1057
Csp6I GTAC 3 cut(s) 245, 379, 688
CviAII CATG 9 cut(s) 103, 253, 296, 489, 772, 1014, 1019, 1072, 1118
CviQI GTAC 3 cut(s) 245, 379, 688
DdeI CTNAG 5 cut(s) 144, 314, 558, 633, 896
DpnI GATC 5 cut(s) 312, 456, 881, 1136, 1193
DpnII GATC 5 cut(s) 310, 454, 879, 1134, 1191
EaeI YGGCCR 1 cut(s) 1120
Eam1104I CTCTTC 1 cut(s) 704
EarI CTCTTC 1 cut(s) 704
EciI GGCGGA 1 cut(s) 249
Eco130I CCWWGG 3 cut(s) 295, 488, 723
Eco147I AGGCCT 1 cut(s) 1084
Eco24I GRGCYC 1 cut(s) 942
Eco47I GGWCC 1 cut(s) 1057
Eco57I CTGAAG 1 cut(s) 297
Eco81I CCTNAGG 1 cut(s) 633
Eco91I GGTNACC 1 cut(s) 483
EcoO109I RGGNCCY 1 cut(s) 326
EcoO65I GGTNACC 1 cut(s) 483
EcoT14I CCWWGG 3 cut(s) 295, 488, 723
EcoT38I GRGCYC 1 cut(s) 942
ErhI CCWWGG 3 cut(s) 295, 488, 723
FaeI CATG 9 cut(s) 106, 256, 299, 492, 775, 1017, 1022, 1075, 1121
FaqI GGGAC 1 cut(s) 496
FatI CATG 9 cut(s) 102, 252, 295, 488, 771, 1013, 1018, 1071, 1117
FokI GGATG 1 cut(s) 572
FriOI GRGCYC 1 cut(s) 942
FspBI CTAG 2 cut(s) 308, 426
GlaI GCGC 1 cut(s) 34
GsuI CTGGAG 1 cut(s) 840
HaeIII GGCC 4 cut(s) 306, 327, 1084, 1122
HapII CCGG 2 cut(s) 612, 825
HhaI GCGC 1 cut(s) 35
Hin1II CATG 9 cut(s) 106, 256, 299, 492, 775, 1017, 1022, 1075, 1121
Hin6I GCGC 1 cut(s) 33
HinP1I GCGC 1 cut(s) 33
HindIII AAGCTT 1 cut(s) 616
HinfI GANTC 7 cut(s) 256, 446, 509, 556, 836, 860, 970
HpaII CCGG 2 cut(s) 612, 825
HphI GGTGA 7 cut(s) 311, 477, 510, 583, 694, 995, 1129
Hpy166II GTNNAC 1 cut(s) 890
Hpy188I TCNGA 2 cut(s) 315, 997
Hpy8I GTNNAC 1 cut(s) 890
HpyAV CCTTC 5 cut(s) 148, 152, 398, 1154, 1174
HpyCH4III ACNGT 2 cut(s) 668, 778
HpyCH4V TGCA 6 cut(s) 168, 435, 640, 985, 1034, 1040
HpyF10VI GCNNNNNNNGC 2 cut(s) 937, 1081
HpyF3I CTNAG 5 cut(s) 144, 314, 558, 633, 896
Hsp92II CATG 9 cut(s) 106, 256, 299, 492, 775, 1017, 1022, 1075, 1121
HspAI GCGC 1 cut(s) 33
Kzo9I GATC 5 cut(s) 310, 454, 879, 1134, 1191
LmnI GCTCC 2 cut(s) 859, 1080
LweI GCATC 3 cut(s) 444, 709, 1021
MaeI CTAG 2 cut(s) 308, 426
MaeIII GTNAC 3 cut(s) 127, 483, 827
MalI GATC 5 cut(s) 312, 456, 881, 1136, 1193
MbiI CCGCTC 1 cut(s) 460
MboI GATC 5 cut(s) 310, 454, 879, 1134, 1191
MflI RGATCY 1 cut(s) 310
MhlI GDGCHC 2 cut(s) 497, 942
MlsI TGGCCA 1 cut(s) 1122
MluCI AATT 4 cut(s) 24, 65, 96, 123
MluNI TGGCCA 1 cut(s) 1122
MlyI GAGTC 3 cut(s) 518, 550, 869
MmeI TCCRAC 2 cut(s) 543, 849
Mox20I TGGCCA 1 cut(s) 1122
MroXI GAANNNNTTC 1 cut(s) 354
MscI TGGCCA 1 cut(s) 1122
MslI CAYNNNNRTG 1 cut(s) 300
Msp20I TGGCCA 1 cut(s) 1122
MspA1I CMGCKG 1 cut(s) 341
MspI CCGG 2 cut(s) 612, 825
MspR9I CCNGG 1 cut(s) 612
MwoI GCNNNNNNNGC 2 cut(s) 937, 1081
NciI CCSGG 1 cut(s) 612
NcoI CCATGG 2 cut(s) 295, 488
NdeII GATC 5 cut(s) 310, 454, 879, 1134, 1191
NlaIII CATG 9 cut(s) 106, 256, 299, 492, 775, 1017, 1022, 1075, 1121
NlaIV GGNNCC 3 cut(s) 328, 496, 855
NmuCI GTSAC 1 cut(s) 483
NspI RCATGY 1 cut(s) 1022
PaqCI CACCTGC 1 cut(s) 1148
PceI AGGCCT 1 cut(s) 1084
PdmI GAANNNNTTC 1 cut(s) 354
PfeI GAWTC 4 cut(s) 256, 446, 836, 970
PflMI CCANNNNNTGG 1 cut(s) 527
PfoI TCCNGGA 1 cut(s) 610
PleI GAGTC 3 cut(s) 517, 550, 868
PpsI GAGTC 3 cut(s) 517, 550, 868
PsiI TTATAA 1 cut(s) 962
PspEI GGTNACC 1 cut(s) 483
PspN4I GGNNCC 3 cut(s) 328, 496, 855
PspPI GGNCC 2 cut(s) 326, 1057
PstNI CAGNNNCTG 1 cut(s) 143
PsuI RGATCY 1 cut(s) 310
PvuII CAGCTG 1 cut(s) 341
RsaI GTAC 3 cut(s) 246, 380, 689
RsaNI GTAC 3 cut(s) 245, 379, 688
RseI CAYNNNNRTG 1 cut(s) 300
Sau3AI GATC 5 cut(s) 310, 454, 879, 1134, 1191
Sau96I GGNCC 2 cut(s) 326, 1057
SchI GAGTC 3 cut(s) 518, 550, 869
ScrFI CCNGG 1 cut(s) 612
SduI GDGCHC 2 cut(s) 497, 942
SfaNI GCATC 3 cut(s) 444, 709, 1021
SfcI CTRYAG 2 cut(s) 712, 754
SinI GGWCC 1 cut(s) 1057
SmiMI CAYNNNNRTG 1 cut(s) 300
Sse9I AATT 4 cut(s) 24, 65, 96, 123
SseBI AGGCCT 1 cut(s) 1084
SsiI CCGC 4 cut(s) 260, 458, 737, 1006
SspMI CTAG 2 cut(s) 308, 426
StuI AGGCCT 1 cut(s) 1084
StyD4I CCNGG 1 cut(s) 610
StyI CCWWGG 3 cut(s) 295, 488, 723
TaaI ACNGT 2 cut(s) 668, 778
TaqI TCGA 4 cut(s) 5, 417, 646, 1167
TasI AATT 4 cut(s) 24, 65, 96, 123
TatI WGTACW 1 cut(s) 244
TfiI GAWTC 4 cut(s) 256, 446, 836, 970
TscAI CASTG 6 cut(s) 64, 121, 671, 987, 1047, 1201
TseFI GTSAC 1 cut(s) 483
Tsp45I GTSAC 1 cut(s) 483
TspDTI ATGAA 5 cut(s) 167, 456, 610, 807, 962
TspRI CASTG 6 cut(s) 64, 121, 671, 987, 1047, 1201
Van91I CCANNNNNTGG 1 cut(s) 527
VpaK11BI GGWCC 1 cut(s) 1057
XapI RAATTY 1 cut(s) 65
XceI RCATGY 1 cut(s) 1022
XcmI CCANNNNNNNNNTGG 1 cut(s) 847
XmnI GAANNNNTTC 1 cut(s) 354
XspI CTAG 2 cut(s) 308, 426
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.