Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0007118

Physical Location & Seq

Genomic Coordinates Forward (+)

64812161 .. 64814915

Gene Structure 2755 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G041060.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1809 bp

ATGATTGAAGGACTTGGTTTCCAGAAGATGTCGAAGATCGCTTCTTCGAAGGCTTTGGTCATCCGAGTCAACCTGGTTTTCCTTGCTCTCTTTTTTGTTGTTTACGCTGCTCTTCTTCTCCAGCCGGCTGCCACTATCTATTACCAGAACGCAGCAGTATCTCTGATTAGGTGCTCATTTCGCGACTGCCATCATCAGAACGGTAAGGTGGTTGATGGCGTTAAGATGATGAAGCAGGTAGTGAAGGAGACAAAAGAAGAGTACATAGCCACACAGCATGAAGGGTTGAATACGAGTACTAAAATGGAGGTACCGAGCTTTTTGGAGGGAATAATATTGAAGGGGATTAAGATTGGGATGGTGAATATGGAAGAAGATGATGTGAGCGAGTGGAAGAGATTTGGACAGGTTATACCGGTTCATTTCGACCGGGTATCAGAGTTATTCAAATGGGAGGATTTATTTCCTGAATGGATTGATGAAGAGGAAGAGACTGATGTGCCGTTTTGCCCGGAGATACCAATGCCGGAGTACCAAATCTACGAGAGGATGAACCTCGTCGTGGCTAAATTGCCTTGCAAGTATCCGGAAGAAGGGTGGAATAGGGAGGTGTTTAGGCTCCAAGTCCATCTCATAGCGGCGAATCTGGCTGTGAAGAGAGGAGTCAGGGACAGGAATTTGAAGACAAAGGTGGTGTTTTGGAGCAAGTGTAGACCAATGCTTGAGATTTTTAGGTGCAGTGACTTGGTGAAACAAGAAGGAGATTGGTGGTTGTTTGAGTCAGATATGGCGAAGTTGAAGCAAAAGGTATCATTGCCTGTTGGCTCTTGCAATCTAGCTTTGCCTCTCTGGGGACAAGGAATCGACGAAGTGTATGACCTGTCCAAGATCCAAGGGTCCACAAAGAATGCAGCCAAAGAAGCCTACGTCACCGTCCTCCACACAAGTAGCTCCTACGTCTGCGGCGCCCTAACCTTAGCCCAGAGCCTCATCCAAACCGGCACAAAGCGCGACCTCGTCCTCCTCCTCGACGACACCATCCCCGCCCCAAAACGGGCCGCCCTATCCACCGCCGGTTGGAAGCTCCGGTTCATAAAACGTATCCGGAATCCGAAAGCAGAAAATGGCACGTACAACGAGTACAACTACAGCAAGTTCCGCCTCTGGCAGCTCACCGACTACGACAAGGTCATCTTCATCGACGCCGACATCATCGTCCTCCGAAACCTCGACCTCCTCTTTCACTTCCCTCAGATGTCGGCCACCGGCAACGACATCCACCTCTTCAACTCCGGCGTCATGGTCATCGAGCCCTCCAACTGCACGTTCCAGCACCTAATGGATCACCGAGACGACATCGTTTCGTACAACGGCGGCGACCAGGGCTTCCTCAACGAGATCTTCGTGTGGTGGCACCGACTGCCGAGGAGGGTTAATTACTTGAAGAATTTTTGGGCCAACACTACCCTTGAGCAGAAAGCGAAAAACGGGCTGTTCGGGGCGGACCCACCGAAGCTGTACTCGATACATTACTTGGGGTTGAAGCCATGGCTGTGTTACAGGGATTACGACTGTAACTGGGACATCGTGGACCAGTTCGTGTACGCGAGTGACGTGGCACACCGGAGGTGGTGGGAGGTTCATGATAAGTTGGACGAGAAGTTGCGGAGGTTTTGTCTGTTGACGAAGGAGAGGAGGACTAATGTGAACTGGGAGCGAAGAAAGGCAAGAATATTGAAGTTTCCTAATGGACACTGGAAAATCAATATTACAGATCCAAGACGGAAACATACTGTGGAAGATGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005829 GO:0005975 GO:0005976 GO:0005977 GO:0005978 GO:0006073 GO:0006091 GO:0006112 GO:0008150 GO:0008152 GO:0008194 GO:0008466 GO:0009058 GO:0009059 GO:0009250 GO:0009832 GO:0009834 GO:0009987 GO:0010383 GO:0010410 GO:0010413 GO:0010417 GO:0012505 GO:0015020 GO:0015980 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0033692 GO:0034637 GO:0034645 GO:0035251 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044036 GO:0044038 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0045491 GO:0045492 GO:0046527 GO:0055114 GO:0070589 GO:0070592 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0080116 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_transf_8

Protein Analysis

602

Amino Acids

70.19

Weight (kDa)

8.41

Isoelectric Point (pI)

41.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_transf_8	PF01501	312 - 416	8.4e-10	Glycosyl transferase family 8

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007118)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G33330 AT4G33330 AT4G33330 AT4G33330 AT4G33330
fragaria_vesca	FvH4_2g34480
malus_domestica	MD08G1102200.v1.1 MD08G1102300.v1.1 MD15G1083700.v1.1
prunus_persica	Prupe.1G436200_v2.0.a1 Prupe.1G436200_v2.0.a1
pyrus_communis	pycom08g08300 pycom08g08310 pycom15g07840
rosa_chinensis	RchiOBHm_Chr6g0307861
rosa_laevigata	RLG00000010692
rosa_multiflora	Rmu_sc0003252.1_g000015
rosa_roxburghii	Rroxscaffold_7G00160810
rosa_rugosa	Rorug06G0361400 Rorug06G0361400
rosa_samantha	Rh6AG470300 Rh6BG481300 Rh6CG486600 Rh6DG472800
rosa_wichuraiana	Rw6G041060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1214
Acc36I	ACCTGC	1 cut(s)	226
Acc65I	GGTACC	1 cut(s)	310
AccB1I	GGYRCC	3 cut(s)	310, 965, 1413
AccI	GTMKAC	1 cut(s)	712
AccII	CGCG	3 cut(s)	183, 1011, 1607
AccIII	TCCGGA	2 cut(s)	586, 1104
AciI	CCGC	9 cut(s)	638, 963, 1044, 1059, 1071, 1159, 1374, 1502, 1666
AclWI	GGATC	3 cut(s)	883, 1350, 1769
AcoI	YGGCCR	1 cut(s)	1260
AcsI	RAATTY	2 cut(s)	676, 1447
AcyI	GRCGYC	3 cut(s)	966, 1203, 1296
AfaI	GTAC	9 cut(s)	263, 298, 312, 533, 1133, 1142, 1367, 1520, 1604
AfiI	CCNNNNNNNGG	6 cut(s)	562, 593, 851, 1053, 1054, 1077
AgeI	ACCGGT	1 cut(s)	415
AjiI	CACGTC	1 cut(s)	1615
AjnI	CCWGG	2 cut(s)	72, 1380
AjuI	GAANNNNNNNTTGG	2 cut(s)	1310, 1342
AluBI	AGCT	6 cut(s)	318, 839, 951, 1084, 1171, 1516
AluI	AGCT	6 cut(s)	318, 839, 951, 1084, 1171, 1516
Alw21I	GWGCWC	1 cut(s)	176
Alw26I	GTCTC	3 cut(s)	242, 485, 1344
AlwI	GGATC	3 cut(s)	883, 1350, 1769
Aor13HI	TCCGGA	2 cut(s)	586, 1104
AoxI	GGCC	3 cut(s)	1056, 1260, 1455
ApeKI	GCWGC	5 cut(s)	107, 128, 152, 911, 1168
ApoI	RAATTY	2 cut(s)	676, 1447
AsiGI	ACCGGT	1 cut(s)	415
Asp718I	GGTACC	1 cut(s)	310
AspLEI	GCGC	2 cut(s)	968, 1011
AspS9I	GGNCC	5 cut(s)	897, 1056, 1455, 1504, 1591
AsuC2I	CCSGG	2 cut(s)	431, 512
AsuHPI	GGTGA	5 cut(s)	373, 760, 922, 1165, 1337
AsuII	TTCGAA	1 cut(s)	47
AvaII	GGWCC	3 cut(s)	897, 1504, 1591
BanI	GGYRCC	3 cut(s)	310, 965, 1413
BanII	GRGCYC	1 cut(s)	1314
BbsI	GAAGAC	1 cut(s)	689
Bbv12I	GWGCWC	1 cut(s)	176
BbvI	GCAGC	5 cut(s)	94, 115, 164, 923, 1180
BccI	CCATC	5 cut(s)	198, 209, 352, 636, 1046
BceAI	ACGGC	2 cut(s)	487, 1387
BciT130I	CCWGG	2 cut(s)	74, 1382
BciVI	GTATCC	2 cut(s)	594, 1112
BcnI	CCSGG	2 cut(s)	431, 512
BcoDI	GTCTC	3 cut(s)	242, 485, 1344
BfaI	CTAG	1 cut(s)	836
BfmI	CTRYAG	1 cut(s)	1147
BfoI	RGCGCY	1 cut(s)	969
BfuAI	ACCTGC	1 cut(s)	226
BfuI	GTATCC	2 cut(s)	594, 1112
BglII	AGATCT	1 cut(s)	1398
BisI	GCNGC	9 cut(s)	108, 129, 153, 639, 912, 964, 1059, 1169, 1375
BlsI	GCNGC	9 cut(s)	109, 130, 154, 640, 913, 965, 1060, 1170, 1376
BmcAI	AGTACT	1 cut(s)	298
Bme1390I	CCNGG	4 cut(s)	74, 431, 512, 1382
Bme18I	GGWCC	3 cut(s)	897, 1504, 1591
BmgBI	CACGTC	1 cut(s)	1615
BmgT120I	GGNCC	5 cut(s)	897, 1056, 1455, 1504, 1591
BmiI	GGNNCC	6 cut(s)	312, 620, 898, 967, 1415, 1506
BmrFI	CCNGG	4 cut(s)	74, 431, 512, 1382
BmrI	ACTGGG	2 cut(s)	1588, 1720
BmuI	ACTGGG	2 cut(s)	1588, 1720
BpiI	GAAGAC	1 cut(s)	689
BpmI	CTGGAG	1 cut(s)	104
Bpu10I	CCTNAGC	1 cut(s)	976
Bpu14I	TTCGAA	1 cut(s)	47
BpuEI	CTTGAG	2 cut(s)	743, 1490
BpuMI	CCSGG	2 cut(s)	431, 512
BsaAI	YACGTR	1 cut(s)	1131
BsaHI	GRCGYC	3 cut(s)	966, 1203, 1296
BsaJI	CCNNGG	4 cut(s)	892, 1381, 1424, 1547
BsaWI	WCCGGW	5 cut(s)	415, 586, 1086, 1104, 1623
BsaXI	ACNNNNNCTCC	4 cut(s)	694, 724, 1660, 1690
Bsc4I	CCNNNNNNNGG	6 cut(s)	562, 593, 851, 1053, 1054, 1077
Bse118I	RCCGGY	5 cut(s)	124, 415, 998, 1073, 1265
Bse1I	ACTGG	4 cut(s)	1583, 1594, 1715, 1760
Bse3DI	GCAATG	1 cut(s)	812
BseAI	TCCGGA	2 cut(s)	586, 1104
BseBI	CCWGG	2 cut(s)	74, 1382
BseDI	CCNNGG	4 cut(s)	892, 1381, 1424, 1547
BseGI	GGATG	6 cut(s)	60, 363, 555, 990, 1038, 1275
BseLI	CCNNNNNNNGG	6 cut(s)	562, 593, 851, 1053, 1054, 1077
BseMI	GCAATG	1 cut(s)	812
BseMII	CTCAG	1 cut(s)	1265
BseNI	ACTGG	4 cut(s)	1583, 1594, 1715, 1760
BseRI	GAGGAG	6 cut(s)	675, 1013, 1016, 1226, 1441, 1708
BseXI	GCAGC	5 cut(s)	94, 115, 164, 923, 1180
BsgI	GTGCAG	2 cut(s)	757, 1306
Bsh1236I	CGCG	3 cut(s)	183, 1011, 1607
Bsh1285I	CGRYCG	1 cut(s)	430
BshFI	GGCC	3 cut(s)	1058, 1262, 1457
BshNI	GGYRCC	3 cut(s)	310, 965, 1413
BshTI	ACCGGT	1 cut(s)	415
BsiEI	CGRYCG	1 cut(s)	430
BsiHKAI	GWGCWC	1 cut(s)	176
BslFI	GGGAC	3 cut(s)	683, 867, 1595
BslI	CCNNNNNNNGG	6 cut(s)	562, 593, 851, 1053, 1054, 1077
BsmAI	GTCTC	3 cut(s)	242, 485, 1344
BsmBI	CGTCTC	1 cut(s)	1344
BsmFI	GGGAC	3 cut(s)	683, 867, 1595
BsmI	GAATGC	1 cut(s)	913
BsnI	GGCC	3 cut(s)	1058, 1262, 1457
Bsp119I	TTCGAA	1 cut(s)	47
Bsp1286I	GDGCHC	2 cut(s)	176, 1314
Bsp13I	TCCGGA	2 cut(s)	586, 1104
Bsp143I	GATC	5 cut(s)	36, 888, 1342, 1398, 1774
Bsp19I	CCATGG	1 cut(s)	1547
Bsp68I	TCGCGA	1 cut(s)	183
BspACI	CCGC	9 cut(s)	638, 963, 1044, 1059, 1071, 1159, 1374, 1502, 1666
BspANI	GGCC	3 cut(s)	1058, 1262, 1457
BspCNI	CTCAG	1 cut(s)	1264
BspEI	TCCGGA	2 cut(s)	586, 1104
BspFNI	CGCG	3 cut(s)	183, 1011, 1607
BspHI	TCATGA	1 cut(s)	1642
BspLI	GGNNCC	6 cut(s)	312, 620, 898, 967, 1415, 1506
BspMI	ACCTGC	1 cut(s)	226
BspPI	GGATC	3 cut(s)	883, 1350, 1769
BspQI	GCTCTTC	1 cut(s)	117
BspT104I	TTCGAA	1 cut(s)	47
BspT107I	GGYRCC	3 cut(s)	310, 965, 1413
BsrDI	GCAATG	1 cut(s)	812
BsrFI	RCCGGY	5 cut(s)	124, 415, 998, 1073, 1265
BsrI	ACTGG	4 cut(s)	1583, 1594, 1715, 1760
BssAI	RCCGGY	5 cut(s)	124, 415, 998, 1073, 1265
BssECI	CCNNGG	4 cut(s)	892, 1381, 1424, 1547
BssMI	GATC	5 cut(s)	36, 888, 1342, 1398, 1774
BssNI	GRCGYC	3 cut(s)	966, 1203, 1296
BssT1I	CCWWGG	2 cut(s)	892, 1547
Bst2UI	CCWGG	2 cut(s)	74, 1382
Bst4CI	ACNGT	4 cut(s)	203, 934, 1574, 1795
Bst6I	CTCTTC	7 cut(s)	117, 252, 389, 477, 483, 650, 1289
BstACI	GRCGYC	3 cut(s)	966, 1203, 1296
BstAPI	GCANNNNNTGC	1 cut(s)	1420
BstBAI	YACGTR	1 cut(s)	1131
BstBI	TTCGAA	1 cut(s)	47
BstC8I	GCNNGC	1 cut(s)	126
BstDEI	CTNAG	2 cut(s)	976, 1251
BstDSI	CCRYGG	1 cut(s)	1547
BstF5I	GGATG	6 cut(s)	60, 363, 555, 990, 1038, 1275
BstFNI	CGCG	3 cut(s)	183, 1011, 1607
BstH2I	RGCGCY	1 cut(s)	969
BstHHI	GCGC	2 cut(s)	968, 1011
BstKTI	GATC	5 cut(s)	39, 891, 1345, 1401, 1777
BstMAI	GTCTC	3 cut(s)	242, 485, 1344
BstMBI	GATC	5 cut(s)	36, 888, 1342, 1398, 1774
BstMCI	CGRYCG	1 cut(s)	430
BstMWI	GCNNNNNNNGC	7 cut(s)	180, 647, 920, 1008, 1158, 1383, 1420
BstNI	CCWGG	2 cut(s)	74, 1382
BstSCI	CCNGG	4 cut(s)	72, 429, 510, 1380
BstSFI	CTRYAG	1 cut(s)	1147
BstUI	CGCG	3 cut(s)	183, 1011, 1607
BstV1I	GCAGC	5 cut(s)	94, 115, 164, 923, 1180
BstV2I	GAAGAC	1 cut(s)	689
BstX2I	RGATCY	3 cut(s)	888, 1398, 1774
BstYI	RGATCY	3 cut(s)	888, 1398, 1774
BsuI	GTATCC	2 cut(s)	594, 1112
BsuRI	GGCC	3 cut(s)	1058, 1262, 1457
BtgI	CCRYGG	1 cut(s)	1547
BtrI	CACGTC	1 cut(s)	1615
BtsCI	GGATG	6 cut(s)	60, 363, 555, 990, 1038, 1275
BtsI	GCAGTG	1 cut(s)	745
BtsIMutI	CAGTG	2 cut(s)	745, 1753
BtuMI	TCGCGA	1 cut(s)	183
BveI	ACCTGC	1 cut(s)	226
Cac8I	GCNNGC	1 cut(s)	126
CciI	TCATGA	1 cut(s)	1642
CfoI	GCGC	2 cut(s)	968, 1011
Cfr10I	RCCGGY	5 cut(s)	124, 415, 998, 1073, 1265
Cfr13I	GGNCC	5 cut(s)	897, 1056, 1455, 1504, 1591
CseI	GACGC	2 cut(s)	1211, 1285
CsiI	ACCWGGT	1 cut(s)	72
Csp6I	GTAC	9 cut(s)	262, 297, 311, 532, 1132, 1141, 1366, 1519, 1603
CspAI	ACCGGT	1 cut(s)	415
CviAII	CATG	4 cut(s)	278, 1300, 1548, 1643
CviQI	GTAC	9 cut(s)	262, 297, 311, 532, 1132, 1141, 1366, 1519, 1603
DdeI	CTNAG	2 cut(s)	976, 1251
DinI	GGCGCC	1 cut(s)	967
DpnI	GATC	5 cut(s)	38, 890, 1344, 1400, 1776
DpnII	GATC	5 cut(s)	36, 888, 1342, 1398, 1774
DrdI	GACNNNNNNGTC	1 cut(s)	1214
DseDI	GACNNNNNNGTC	1 cut(s)	1214
EaeI	YGGCCR	1 cut(s)	1260
Eam1104I	CTCTTC	7 cut(s)	117, 252, 389, 477, 483, 650, 1289
EarI	CTCTTC	7 cut(s)	117, 252, 389, 477, 483, 650, 1289
EciI	GGCGGA	2 cut(s)	1148, 1517
Eco130I	CCWWGG	2 cut(s)	892, 1547
Eco24I	GRGCYC	1 cut(s)	1314
Eco47I	GGWCC	3 cut(s)	897, 1504, 1591
EcoRII	CCWGG	2 cut(s)	72, 1380
EcoT14I	CCWWGG	2 cut(s)	892, 1547
EcoT38I	GRGCYC	1 cut(s)	1314
EgeI	GGCGCC	1 cut(s)	967
EheI	GGCGCC	1 cut(s)	967
ErhI	CCWWGG	2 cut(s)	892, 1547
Esp3I	CGTCTC	1 cut(s)	1344
FaeI	CATG	4 cut(s)	281, 1303, 1551, 1646
FalI	AAGNNNNNCTT	2 cut(s)	1178, 1210
FaqI	GGGAC	3 cut(s)	683, 867, 1595
FatI	CATG	4 cut(s)	277, 1299, 1547, 1642
FauI	CCCGC	1 cut(s)	1051
FblI	GTMKAC	1 cut(s)	712
Fnu4HI	GCNGC	9 cut(s)	108, 129, 153, 639, 912, 964, 1059, 1169, 1375
FokI	GGATG	6 cut(s)	47, 370, 562, 977, 1025, 1262
FriOI	GRGCYC	1 cut(s)	1314
Fsp4HI	GCNGC	9 cut(s)	108, 129, 153, 639, 912, 964, 1059, 1169, 1375
FspBI	CTAG	1 cut(s)	836
GlaI	GCGC	2 cut(s)	967, 1010
GluI	GCNGC	9 cut(s)	108, 129, 153, 639, 912, 964, 1059, 1169, 1375
GsuI	CTGGAG	1 cut(s)	104
HaeII	RGCGCY	1 cut(s)	969
HaeIII	GGCC	3 cut(s)	1058, 1262, 1457
HgaI	GACGC	2 cut(s)	1211, 1285
HhaI	GCGC	2 cut(s)	968, 1011
Hin1I	GRCGYC	3 cut(s)	966, 1203, 1296
Hin1II	CATG	4 cut(s)	281, 1303, 1551, 1646
Hin6I	GCGC	2 cut(s)	966, 1009
HinP1I	GCGC	2 cut(s)	966, 1009
HincII	GTYRAC	2 cut(s)	70, 1683
HindII	GTYRAC	2 cut(s)	70, 1683
HinfI	GANTC	6 cut(s)	66, 643, 663, 779, 861, 1108
HphI	GGTGA	5 cut(s)	373, 760, 922, 1165, 1337
Hpy166II	GTNNAC	8 cut(s)	70, 103, 713, 900, 1591, 1603, 1683, 1708
Hpy188I	TCNGA	8 cut(s)	65, 165, 198, 439, 784, 1113, 1223, 1254
Hpy188III	TCNNGA	6 cut(s)	22, 182, 467, 587, 1105, 1643
Hpy8I	GTNNAC	8 cut(s)	70, 103, 713, 900, 1591, 1603, 1683, 1708
Hpy99I	CGWCG	4 cut(s)	563, 869, 1034, 1205
HpyAV	CCTTC	7 cut(s)	43, 238, 275, 334, 587, 752, 1681
HpyCH4III	ACNGT	4 cut(s)	203, 934, 1574, 1795
HpyCH4IV	ACGT	6 cut(s)	927, 957, 1099, 1130, 1325, 1614
HpyCH4V	TGCA	5 cut(s)	579, 738, 831, 911, 1323
HpyF10VI	GCNNNNNNNGC	7 cut(s)	180, 647, 920, 1008, 1158, 1383, 1420
HpyF3I	CTNAG	2 cut(s)	976, 1251
HpySE526I	ACGT	6 cut(s)	927, 957, 1099, 1130, 1325, 1614
Hsp92I	GRCGYC	3 cut(s)	966, 1203, 1296
Hsp92II	CATG	4 cut(s)	281, 1303, 1551, 1646
HspAI	GCGC	2 cut(s)	966, 1009
KasI	GGCGCC	1 cut(s)	965
Kpn2I	TCCGGA	2 cut(s)	586, 1104
KpnI	GGTACC	1 cut(s)	314
KroI	GCCGGC	1 cut(s)	124
KroNI	GCCGGC	1 cut(s)	126
Kzo9I	GATC	5 cut(s)	36, 888, 1342, 1398, 1774
LguI	GCTCTTC	1 cut(s)	117
LmnI	GCTCC	5 cut(s)	624, 702, 956, 1089, 1714
Lsp1109I	GCAGC	5 cut(s)	94, 115, 164, 923, 1180
MabI	ACCWGGT	1 cut(s)	72
MaeI	CTAG	1 cut(s)	836
MaeII	ACGT	6 cut(s)	927, 957, 1099, 1130, 1325, 1614
MaeIII	GTNAC	5 cut(s)	740, 928, 1556, 1574, 1610
MalI	GATC	5 cut(s)	38, 890, 1344, 1400, 1776
MboI	GATC	5 cut(s)	36, 888, 1342, 1398, 1774
MflI	RGATCY	3 cut(s)	888, 1398, 1774
MhlI	GDGCHC	2 cut(s)	176, 1314
MluCI	AATT	4 cut(s)	569, 676, 1435, 1447
Mly113I	GGCGCC	1 cut(s)	966
MlyI	GAGTC	3 cut(s)	75, 672, 788
MmeI	TCCRAC	3 cut(s)	1058, 1341, 1632
MroI	TCCGGA	2 cut(s)	586, 1104
MroNI	GCCGGC	1 cut(s)	124
MseI	TTAA	3 cut(s)	222, 348, 1434
MslI	CAYNNNNRTG	1 cut(s)	1552
MspR9I	CCNGG	4 cut(s)	74, 431, 512, 1382
Mva1269I	GAATGC	1 cut(s)	913
MvaI	CCWGG	2 cut(s)	74, 1382
MvnI	CGCG	3 cut(s)	183, 1011, 1607
MwoI	GCNNNNNNNGC	7 cut(s)	180, 647, 920, 1008, 1158, 1383, 1420
NaeI	GCCGGC	1 cut(s)	126
NarI	GGCGCC	1 cut(s)	966
NciI	CCSGG	2 cut(s)	431, 512
NcoI	CCATGG	1 cut(s)	1547
NdeII	GATC	5 cut(s)	36, 888, 1342, 1398, 1774
NgoMIV	GCCGGC	1 cut(s)	124
NlaIII	CATG	4 cut(s)	281, 1303, 1551, 1646
NlaIV	GGNNCC	6 cut(s)	312, 620, 898, 967, 1415, 1506
NmeAIII	GCCGAG	1 cut(s)	1449
NmuCI	GTSAC	3 cut(s)	740, 928, 1610
NruI	TCGCGA	1 cut(s)	183
NspV	TTCGAA	1 cut(s)	47
PagI	TCATGA	1 cut(s)	1642
PciSI	GCTCTTC	1 cut(s)	117
PcsI	WCGNNNNNNNCGW	2 cut(s)	1401, 1611
PctI	GAATGC	1 cut(s)	913
PdiI	GCCGGC	1 cut(s)	126
PfeI	GAWTC	3 cut(s)	643, 861, 1108
PflFI	GACNNNGTC	2 cut(s)	1016, 1187
PinAI	ACCGGT	1 cut(s)	415
PkrI	GCNGC	9 cut(s)	109, 130, 154, 640, 913, 965, 1060, 1170, 1376
PleI	GAGTC	3 cut(s)	74, 671, 787
PluTI	GGCGCC	1 cut(s)	969
PpsI	GAGTC	3 cut(s)	74, 671, 787
Ppu21I	YACGTR	1 cut(s)	1131
Psp6I	CCWGG	2 cut(s)	72, 1380
PspGI	CCWGG	2 cut(s)	72, 1380
PspN4I	GGNNCC	6 cut(s)	312, 620, 898, 967, 1415, 1506
PspPI	GGNCC	5 cut(s)	897, 1056, 1455, 1504, 1591
PsuI	RGATCY	3 cut(s)	888, 1398, 1774
PsyI	GACNNNGTC	2 cut(s)	1016, 1187
RruI	TCGCGA	1 cut(s)	183
RsaI	GTAC	9 cut(s)	263, 298, 312, 533, 1133, 1142, 1367, 1520, 1604
RsaNI	GTAC	9 cut(s)	262, 297, 311, 532, 1132, 1141, 1366, 1519, 1603
RseI	CAYNNNNRTG	1 cut(s)	1552
SapI	GCTCTTC	1 cut(s)	117
SaqAI	TTAA	3 cut(s)	222, 348, 1434
SatI	GCNGC	9 cut(s)	108, 129, 153, 639, 912, 964, 1059, 1169, 1375
Sau3AI	GATC	5 cut(s)	36, 888, 1342, 1398, 1774
Sau96I	GGNCC	5 cut(s)	897, 1056, 1455, 1504, 1591
ScaI	AGTACT	1 cut(s)	298
SchI	GAGTC	3 cut(s)	75, 672, 788
ScrFI	CCNGG	4 cut(s)	74, 431, 512, 1382
SduI	GDGCHC	2 cut(s)	176, 1314
SexAI	ACCWGGT	1 cut(s)	72
SfcI	CTRYAG	1 cut(s)	1147
SfoI	GGCGCC	1 cut(s)	967
SfuI	TTCGAA	1 cut(s)	47
SinI	GGWCC	3 cut(s)	897, 1504, 1591
SmiMI	CAYNNNNRTG	1 cut(s)	1552
SmlI	CTYRAG	2 cut(s)	722, 1469
SmoI	CTYRAG	2 cut(s)	722, 1469
Sse9I	AATT	4 cut(s)	569, 676, 1435, 1447
SsiI	CCGC	9 cut(s)	638, 963, 1044, 1059, 1071, 1159, 1374, 1502, 1666
SspDI	GGCGCC	1 cut(s)	965
SspI	AATATT	3 cut(s)	336, 1734, 1768
SspMI	CTAG	1 cut(s)	836
StyD4I	CCNGG	4 cut(s)	72, 429, 510, 1380
StyI	CCWWGG	2 cut(s)	892, 1547
TaaI	ACNGT	4 cut(s)	203, 934, 1574, 1795
TaiI	ACGT	6 cut(s)	930, 960, 1102, 1133, 1328, 1617
TaqI	TCGA	9 cut(s)	32, 47, 426, 864, 1029, 1200, 1230, 1308, 1523
TasI	AATT	4 cut(s)	569, 676, 1435, 1447
TatI	WGTACW	4 cut(s)	261, 296, 1140, 1518
TauI	GCSGC	4 cut(s)	641, 966, 1061, 1377
TfiI	GAWTC	3 cut(s)	643, 861, 1108
Tru1I	TTAA	3 cut(s)	222, 348, 1434
Tru9I	TTAA	3 cut(s)	222, 348, 1434
TscAI	CASTG	2 cut(s)	745, 1760
TseFI	GTSAC	3 cut(s)	740, 928, 1610
TseI	GCWGC	5 cut(s)	107, 128, 152, 911, 1168
Tsp45I	GTSAC	3 cut(s)	740, 928, 1610
TspDTI	ATGAA	8 cut(s)	245, 294, 410, 495, 566, 1081, 1186, 1631
TspGWI	ACGGA	1 cut(s)	1798
TspRI	CASTG	2 cut(s)	745, 1760
Tth111I	GACNNNGTC	2 cut(s)	1016, 1187
VpaK11BI	GGWCC	3 cut(s)	897, 1504, 1591
XapI	RAATTY	2 cut(s)	676, 1447
XmiI	GTMKAC	1 cut(s)	712
XspI	CTAG	1 cut(s)	836
ZrmI	AGTACT	1 cut(s)	298

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.