Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0006377

Physical Location & Seq

Genomic Coordinates Reverse (-)

50970601 .. 50995786

Gene Structure 25186 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0361400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1809 bp

ATGGACAGGGACGCCCGGAATTTGATGCGTCCGATCAACTCCGATTTCACTTCGTCGTCGTCGTCTTCCTCTAATTCCGACCTTTTCCGCAGCGTTCAGGCCGCGCTTAAGCGCCACCGCCCTCTAGAGACAAGCATAAGGCCTAAGCGCATGTTGGCTCCCCGAAGAGAAGTAACTAAAAGTTCGGCTTCAAGTGCGGCTGTCGTTGACACAAAGAATTCGCGAGATGTAGCTACGCAGGGTCAGGATAATATTGCAAAGGAATCAAGTGTGCAGCCACACGACATGCCTACTAGTGCCGAGGAATCTCAGGAAGATGCATGTGTTACGGCAGTTTCTAATTCAAGCAGTATCACCCACACGTTTGATGAGAATTTAGATGTGCCCATAGATCAAACTAAGCCTGACATTGGTGCTTCCTGTCATTTTGAGTCTCAAGGGATTGATGCTCAAAAGAAGGTCCAATTTTCAATTGGAACTGGTGCTTCTTCCCTGGAAATGGAGTGGGTTTCTGCTAGTCAAGCAGAGGCATCAGCTGTCATAAATCATGATTCAAAGCATCAGAATATTCTGAATACAGAAGCGGATATCTGTTTGAAGTCTGATGGTAGGATTTCCTTGTTGGCAAAGAGAACAACTGCCGCTCAAGATCAGTTGCATCAATTCAGGAACTTCTTAAGCCAGCCTATGACTCAATCCTCAGTTGTTGGGCCATCGTGTGCTACTACAACGTCTGTCCATGCTACTTCAGCACCCATGTCAACAACTTATTGTTCTAGTTTGCATAGTGGTTATCAGGTGCCAGTAGAACCCTTGAAGGATTCTAATGTAAACCCTCAACCATCAAATGCTCCTTTAAGGGGCACCGGTGCAATGTCCAATCCCCAGATAGTTGTTGCAGCCCAACCTTTTACCTCTGCAGTTGATACCCAAAACGAAGGTAAGGAATATGACCTTTCTAAGGAGCAAAAAGGCTGCAAGCTGTCGGAGAGTGAATATCAGGAAAACCCTTCTCTTGCCGATGTGAAGCAAACTGAAGTTGAATCGTATGCAGGTGATGTTGCCAATGCACGATCTCAGGTTACTTTGCCCCCAAATTTATGTTCTGATACAAAGTCAGAGCCTTCAAAATCAGAAAAACAAGAAAAGGCTGCAAGTGGTAAAGTTGTTCCAGCTCCTCGTAAAAAAAATAAAGATTCTGACTTGTTTATTAAAGTAAATGGGAAGCTCTATCAGAGGCTTGGAAAAATAGGTAGTGGAGGCAGCAGTGAGGTCCACAAAGTTATATCATCAGACTGTACAATCTATGCTCTTAAGAAAATCAAGCTGAAAGGGCGTGACTATGCCACTGCTTTTGGTTTTTGTCAGGAAATCGAATATCTGAATAAGTTGAAAGGGAAGAACCACATCATACAGCTTATAGACTATGAGGTGACAGATAAGGCTTTACTGCATGCAGTATTGAGTGGCTCCATAAATAATAAAGATGGCAGAGTCAAGGATGATGGGTATATATACATGGTACTTGAATATGGAGAAATTGATTTGGCTCACATGCTGTCCCAGAAGTGGAAGGAAATGGATGGGTCGAACCAGACCATAGATGAGAACTGGCTACGATTCTACTGGCAGCAAATTCTTCTGGCAGTCAGCACCATACATGAAGAGCGAATTGTGCACTCTGACTTGAAGCCGGCTAATTTCCTGCTTGTCAGAGGCTCTCTTAAGCTGATTGATTTTGGGATTGCTAAAGCTATAATGAGTGATACAACCAACATCCAACGGGATTCTCAGATGCCAATTGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006996 GO:0008150 GO:0009657 GO:0009658 GO:0009902 GO:0009903 GO:0009904 GO:0009987 GO:0016020 GO:0016043 GO:0019750 GO:0044424 GO:0044444 GO:0044464 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051644 GO:0051649 GO:0051656 GO:0051667 GO:0071840 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WEMBL

Protein Analysis

602

Amino Acids

66.03

Weight (kDa)

6.14

Isoelectric Point (pI)

45.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	411 - 590	2e-30	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	417 - 601	6.3e-08	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006377)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G26570 AT2G26570
fragaria_vesca	FvH4_2g34472 FvH4_2g34472 FvH4_2g34472 FvH4_2g34472 FvH4_2g34472 FvH4_2g34472 FvH4_2g34472
malus_domestica	MD08G1102100.v1.1 MD15G1083600.v1.1
prunus_persica	Prupe.1G436100_v2.0.a1 Prupe.1G436100_v2.0.a1 Prupe.1G436100_v2.0.a1
pyrus_communis	pycom15g07820
rosa_chinensis	RchiOBHm_Chr6g0307881
rosa_laevigata	RLG00000010691
rosa_multiflora	Rmu_sc0009398.1_g000001
rosa_roxburghii	Rroxscaffold_7G00160800
rosa_rugosa	Rorug06G0361400 Rorug06G0361400 Rorug06G0361400
rosa_samantha	Rh6AG470400 Rh6BG481400 Rh6CG486700 Rh6DG472900
rosa_wichuraiana	Rw6G041070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1043
Acc36I	ACCTGC	1 cut(s)	1043
AccB1I	GGYRCC	2 cut(s)	799, 863
AccBSI	CCGCTC	1 cut(s)	644
AccII	CGCG	2 cut(s)	104, 223
AciI	CCGC	6 cut(s)	88, 102, 118, 197, 584, 642
AcsI	RAATTY	5 cut(s)	19, 217, 373, 1096, 1635
AcuI	CTGAAG	2 cut(s)	732, 1056
AcyI	GRCGYC	1 cut(s)	12
AfaI	GTAC	2 cut(s)	1300, 1524
AfiI	CCNNNNNNNGG	5 cut(s)	410, 499, 860, 961, 1569
AflII	CTTAAG	4 cut(s)	107, 676, 1313, 1724
AflIII	ACRYGT	1 cut(s)	360
AgeI	ACCGGT	1 cut(s)	866
AhlI	ACTAGT	1 cut(s)	293
AjnI	CCWGG	1 cut(s)	492
AjuI	GAANNNNNNNTTGG	2 cut(s)	1087, 1119
AluBI	AGCT	9 cut(s)	233, 536, 982, 1175, 1228, 1327, 1417, 1729, 1754
AluI	AGCT	9 cut(s)	233, 536, 982, 1175, 1228, 1327, 1417, 1729, 1754
Alw21I	GWGCWC	1 cut(s)	1680
Alw26I	GTCTC	2 cut(s)	122, 438
Alw44I	GTGCAC	1 cut(s)	1676
AoxI	GGCC	3 cut(s)	99, 140, 710
ApaLI	GTGCAC	1 cut(s)	1676
ApeKI	GCWGC	7 cut(s)	90, 274, 899, 975, 1151, 1263, 1630
ApoI	RAATTY	5 cut(s)	19, 217, 373, 1096, 1635
AsiGI	ACCGGT	1 cut(s)	866
AspLEI	GCGC	3 cut(s)	106, 114, 150
AspS9I	GGNCC	3 cut(s)	460, 710, 1273
AsuC2I	CCSGG	1 cut(s)	16
AsuHPI	GGTGA	3 cut(s)	346, 1067, 1444
AvaII	GGWCC	2 cut(s)	460, 1273
BaeGI	GKGCMC	3 cut(s)	387, 866, 1680
BanI	GGYRCC	2 cut(s)	799, 863
BbsI	GAAGAC	1 cut(s)	57
Bbv12I	GWGCWC	1 cut(s)	1680
BbvI	GCAGC	7 cut(s)	102, 286, 911, 962, 1138, 1275, 1642
BccI	CCATC	6 cut(s)	599, 721, 850, 1481, 1499, 1577
BceAI	ACGGC	1 cut(s)	345
BciT130I	CCWGG	1 cut(s)	494
BcnI	CCSGG	1 cut(s)	16
BcoDI	GTCTC	2 cut(s)	122, 438
BcuI	ACTAGT	1 cut(s)	293
BfaI	CTAG	4 cut(s)	125, 294, 516, 777
BfmI	CTRYAG	1 cut(s)	918
BfoI	RGCGCY	1 cut(s)	115
BfrI	CTTAAG	4 cut(s)	107, 676, 1313, 1724
BfuAI	ACCTGC	1 cut(s)	1043
Bme1390I	CCNGG	2 cut(s)	16, 494
Bme18I	GGWCC	2 cut(s)	460, 1273
BmgT120I	GGNCC	3 cut(s)	460, 710, 1273
BmiI	GGNNCC	4 cut(s)	159, 801, 865, 1471
BmrFI	CCNGG	2 cut(s)	16, 494
BmsI	GCATC	7 cut(s)	15, 307, 436, 539, 568, 667, 1785
BpiI	GAAGAC	1 cut(s)	57
Bpu10I	CCTNAGC	1 cut(s)	144
BpuEI	CTTGAG	2 cut(s)	420, 630
BpuMI	CCSGG	1 cut(s)	16
BsaHI	GRCGYC	1 cut(s)	12
BsaJI	CCNNGG	2 cut(s)	300, 492
BsaWI	WCCGGW	1 cut(s)	866
Bsc4I	CCNNNNNNNGG	5 cut(s)	410, 499, 860, 961, 1569
Bse118I	RCCGGY	2 cut(s)	866, 1693
Bse1I	ACTGG	4 cut(s)	484, 803, 1616, 1631
Bse3DI	GCAATG	1 cut(s)	879
BseBI	CCWGG	1 cut(s)	494
BseDI	CCNNGG	2 cut(s)	300, 492
BseGI	GGATG	3 cut(s)	1507, 1588, 1776
BseLI	CCNNNNNNNGG	5 cut(s)	410, 499, 860, 961, 1569
BseMI	GCAATG	1 cut(s)	879
BseMII	CTCAG	4 cut(s)	323, 714, 1091, 1805
BseNI	ACTGG	4 cut(s)	484, 803, 1616, 1631
BseRI	GAGGAG	1 cut(s)	1167
BseSI	GKGCMC	3 cut(s)	387, 866, 1680
BseXI	GCAGC	7 cut(s)	102, 286, 911, 962, 1138, 1275, 1642
BsgI	GTGCAG	1 cut(s)	293
Bsh1236I	CGCG	2 cut(s)	104, 223
BshFI	GGCC	3 cut(s)	101, 142, 712
BshNI	GGYRCC	2 cut(s)	799, 863
BshTI	ACCGGT	1 cut(s)	866
BsiHKAI	GWGCWC	1 cut(s)	1680
BsiSI	CCGG	3 cut(s)	16, 867, 1694
BslFI	GGGAC	2 cut(s)	23, 1546
BslI	CCNNNNNNNGG	5 cut(s)	410, 499, 860, 961, 1569
BsmAI	GTCTC	2 cut(s)	122, 438
BsmFI	GGGAC	2 cut(s)	23, 1546
BsnI	GGCC	3 cut(s)	101, 142, 712
Bsp1286I	GDGCHC	3 cut(s)	387, 866, 1680
Bsp1407I	TGTACA	1 cut(s)	1298
Bsp143I	GATC	4 cut(s)	33, 391, 649, 1073
Bsp68I	TCGCGA	1 cut(s)	223
BspACI	CCGC	6 cut(s)	88, 102, 118, 197, 584, 642
BspANI	GGCC	3 cut(s)	101, 142, 712
BspCNI	CTCAG	4 cut(s)	322, 713, 1090, 1804
BspFNI	CGCG	2 cut(s)	104, 223
BspHI	TCATGA	1 cut(s)	547
BspLI	GGNNCC	4 cut(s)	159, 801, 865, 1471
BspMAI	CTGCAG	1 cut(s)	922
BspMI	ACCTGC	1 cut(s)	1043
BspQI	GCTCTTC	1 cut(s)	1659
BspT107I	GGYRCC	2 cut(s)	799, 863
BspTI	CTTAAG	4 cut(s)	107, 676, 1313, 1724
BsrBI	CCGCTC	1 cut(s)	644
BsrDI	GCAATG	1 cut(s)	879
BsrFI	RCCGGY	2 cut(s)	866, 1693
BsrGI	TGTACA	1 cut(s)	1298
BsrI	ACTGG	4 cut(s)	484, 803, 1616, 1631
BssAI	RCCGGY	2 cut(s)	866, 1693
BssECI	CCNNGG	2 cut(s)	300, 492
BssMI	GATC	4 cut(s)	33, 391, 649, 1073
BssNI	GRCGYC	1 cut(s)	12
Bst2UI	CCWGG	1 cut(s)	494
Bst4CI	ACNGT	1 cut(s)	1298
Bst6I	CTCTTC	2 cut(s)	160, 1659
BstACI	GRCGYC	1 cut(s)	12
BstAFI	CTTAAG	4 cut(s)	107, 676, 1313, 1724
BstAUI	TGTACA	1 cut(s)	1298
BstC8I	GCNNGC	4 cut(s)	683, 980, 1455, 1695
BstDEI	CTNAG	7 cut(s)	144, 309, 399, 700, 960, 1077, 1791
BstENI	CCTNNNNNAGG	1 cut(s)	959
BstF5I	GGATG	3 cut(s)	1507, 1588, 1776
BstFNI	CGCG	2 cut(s)	104, 223
BstH2I	RGCGCY	1 cut(s)	115
BstHHI	GCGC	3 cut(s)	106, 114, 150
BstKTI	GATC	4 cut(s)	36, 394, 652, 1076
BstMAI	GTCTC	2 cut(s)	122, 438
BstMBI	GATC	4 cut(s)	33, 391, 649, 1073
BstMWI	GCNNNNNNNGC	5 cut(s)	194, 521, 749, 1333, 1675
BstNI	CCWGG	1 cut(s)	494
BstNSI	RCATGY	5 cut(s)	154, 289, 324, 1457, 1558
BstSCI	CCNGG	2 cut(s)	14, 492
BstSFI	CTRYAG	1 cut(s)	918
BstSLI	GKGCMC	3 cut(s)	387, 866, 1680
BstUI	CGCG	2 cut(s)	104, 223
BstV1I	GCAGC	7 cut(s)	102, 286, 911, 962, 1138, 1275, 1642
BstV2I	GAAGAC	1 cut(s)	57
BsuRI	GGCC	3 cut(s)	101, 142, 712
BtsCI	GGATG	3 cut(s)	1507, 1588, 1776
BtsI	GCAGTG	2 cut(s)	1273, 1347
BtsIMutI	CAGTG	2 cut(s)	1273, 1347
BtuMI	TCGCGA	1 cut(s)	223
BveI	ACCTGC	1 cut(s)	1043
Cac8I	GCNNGC	4 cut(s)	683, 980, 1455, 1695
CciI	TCATGA	1 cut(s)	547
CfoI	GCGC	3 cut(s)	106, 114, 150
Cfr10I	RCCGGY	2 cut(s)	866, 1693
Cfr13I	GGNCC	3 cut(s)	460, 710, 1273
CseI	GACGC	2 cut(s)	17, 20
Csp6I	GTAC	2 cut(s)	1299, 1523
CspAI	ACCGGT	1 cut(s)	866
CspCI	CAANNNNNGTGG	2 cut(s)	1336, 1371
CviQI	GTAC	2 cut(s)	1299, 1523
DdeI	CTNAG	7 cut(s)	144, 309, 399, 700, 960, 1077, 1791
DpnI	GATC	4 cut(s)	35, 393, 651, 1075
DpnII	GATC	4 cut(s)	33, 391, 649, 1073
Eam1104I	CTCTTC	2 cut(s)	160, 1659
EarI	CTCTTC	2 cut(s)	160, 1659
Eco147I	AGGCCT	1 cut(s)	142
Eco32I	GATATC	1 cut(s)	589
Eco47I	GGWCC	2 cut(s)	460, 1273
Eco57I	CTGAAG	2 cut(s)	732, 1056
EcoNI	CCTNNNNNAGG	1 cut(s)	959
EcoRI	GAATTC	1 cut(s)	217
EcoRII	CCWGG	1 cut(s)	492
EcoRV	GATATC	1 cut(s)	589
EcoT22I	ATGCAT	1 cut(s)	322
FalI	AAGNNNNNCTT	2 cut(s)	172, 204
FaqI	GGGAC	2 cut(s)	23, 1546
FokI	GGATG	3 cut(s)	1514, 1595, 1763
FspBI	CTAG	4 cut(s)	125, 294, 516, 777
GlaI	GCGC	3 cut(s)	105, 113, 149
HaeII	RGCGCY	1 cut(s)	115
HaeIII	GGCC	3 cut(s)	101, 142, 712
HapII	CCGG	3 cut(s)	16, 867, 1694
HgaI	GACGC	2 cut(s)	17, 20
HhaI	GCGC	3 cut(s)	106, 114, 150
Hin1I	GRCGYC	1 cut(s)	12
Hin6I	GCGC	3 cut(s)	104, 112, 148
HinP1I	GCGC	3 cut(s)	104, 112, 148
HincII	GTYRAC	2 cut(s)	208, 762
HindII	GTYRAC	2 cut(s)	208, 762
HpaII	CCGG	3 cut(s)	16, 867, 1694
HphI	GGTGA	3 cut(s)	346, 1067, 1444
Hpy166II	GTNNAC	5 cut(s)	208, 762, 832, 1276, 1678
Hpy188III	TCNNGA	9 cut(s)	125, 222, 245, 311, 548, 647, 667, 1001, 1367
Hpy8I	GTNNAC	5 cut(s)	208, 762, 832, 1276, 1678
Hpy99I	CGWCG	3 cut(s)	58, 61, 64
HpyAV	CCTTC	6 cut(s)	451, 811, 932, 1020, 1134, 1567
HpyCH4III	ACNGT	1 cut(s)	1298
HpyCH4IV	ACGT	2 cut(s)	362, 731
HpyF10VI	GCNNNNNNNGC	5 cut(s)	194, 521, 749, 1333, 1675
HpyF3I	CTNAG	7 cut(s)	144, 309, 399, 700, 960, 1077, 1791
HpySE526I	ACGT	2 cut(s)	362, 731
Hsp92I	GRCGYC	1 cut(s)	12
HspAI	GCGC	3 cut(s)	104, 112, 148
KroI	GCCGGC	1 cut(s)	1693
KroNI	GCCGGC	1 cut(s)	1695
Kzo9I	GATC	4 cut(s)	33, 391, 649, 1073
LguI	GCTCTTC	1 cut(s)	1659
LmnI	GCTCC	5 cut(s)	163, 856, 964, 1180, 1475
Lsp1109I	GCAGC	7 cut(s)	102, 286, 911, 962, 1138, 1275, 1642
LweI	GCATC	7 cut(s)	15, 307, 436, 539, 568, 667, 1785
MaeI	CTAG	4 cut(s)	125, 294, 516, 777
MaeII	ACGT	2 cut(s)	362, 731
MaeIII	GTNAC	5 cut(s)	172, 325, 1081, 1337, 1432
MalI	GATC	4 cut(s)	35, 393, 651, 1075
MbiI	CCGCTC	1 cut(s)	644
MboI	GATC	4 cut(s)	33, 391, 649, 1073
MboII	GAAGA	7 cut(s)	57, 177, 326, 480, 1411, 1631, 1676
MfeI	CAATTG	2 cut(s)	471, 1800
MhlI	GDGCHC	3 cut(s)	387, 866, 1680
MlyI	GAGTC	3 cut(s)	440, 685, 1503
MmeI	TCCRAC	3 cut(s)	102, 966, 1804
Mph1103I	ATGCAT	1 cut(s)	322
MroNI	GCCGGC	1 cut(s)	1693
MseI	TTAA	6 cut(s)	108, 677, 857, 1212, 1314, 1725
MspA1I	CMGCKG	1 cut(s)	536
MspCI	CTTAAG	4 cut(s)	107, 676, 1313, 1724
MspI	CCGG	3 cut(s)	16, 867, 1694
MspR9I	CCNGG	2 cut(s)	16, 494
MunI	CAATTG	2 cut(s)	471, 1800
MvaI	CCWGG	1 cut(s)	494
MvnI	CGCG	2 cut(s)	104, 223
MwoI	GCNNNNNNNGC	5 cut(s)	194, 521, 749, 1333, 1675
NaeI	GCCGGC	1 cut(s)	1695
NciI	CCSGG	1 cut(s)	16
NdeII	GATC	4 cut(s)	33, 391, 649, 1073
NgoMIV	GCCGGC	1 cut(s)	1693
NlaIV	GGNNCC	4 cut(s)	159, 801, 865, 1471
NmeAIII	GCCGAG	1 cut(s)	325
NmuCI	GTSAC	2 cut(s)	1337, 1432
NruI	TCGCGA	1 cut(s)	223
NsiI	ATGCAT	1 cut(s)	322
NspI	RCATGY	5 cut(s)	154, 289, 324, 1457, 1558
PaeI	GCATGC	1 cut(s)	1457
PagI	TCATGA	1 cut(s)	547
PaqCI	CACCTGC	1 cut(s)	1043
PceI	AGGCCT	1 cut(s)	142
PciSI	GCTCTTC	1 cut(s)	1659
PcsI	WCGNNNNNNNCGW	1 cut(s)	59
PdiI	GCCGGC	1 cut(s)	1695
PfeI	GAWTC	8 cut(s)	263, 305, 551, 821, 1043, 1196, 1620, 1787
PinAI	ACCGGT	1 cut(s)	866
PleI	GAGTC	3 cut(s)	439, 685, 1502
PpsI	GAGTC	3 cut(s)	439, 685, 1502
Psp6I	CCWGG	1 cut(s)	492
PspGI	CCWGG	1 cut(s)	492
PspN4I	GGNNCC	4 cut(s)	159, 801, 865, 1471
PspPI	GGNCC	3 cut(s)	460, 710, 1273
PstI	CTGCAG	1 cut(s)	922
PvuII	CAGCTG	1 cut(s)	536
RruI	TCGCGA	1 cut(s)	223
RsaI	GTAC	2 cut(s)	1300, 1524
RsaNI	GTAC	2 cut(s)	1299, 1523
SapI	GCTCTTC	1 cut(s)	1659
SaqAI	TTAA	6 cut(s)	108, 677, 857, 1212, 1314, 1725
Sau3AI	GATC	4 cut(s)	33, 391, 649, 1073
Sau96I	GGNCC	3 cut(s)	460, 710, 1273
SchI	GAGTC	3 cut(s)	440, 685, 1503
ScrFI	CCNGG	2 cut(s)	16, 494
SduI	GDGCHC	3 cut(s)	387, 866, 1680
SfaNI	GCATC	7 cut(s)	15, 307, 436, 539, 568, 667, 1785
SfcI	CTRYAG	1 cut(s)	918
SgrAI	CRCCGGYG	1 cut(s)	866
SinI	GGWCC	2 cut(s)	460, 1273
SmlI	CTYRAG	6 cut(s)	107, 435, 645, 676, 1313, 1724
SmoI	CTYRAG	6 cut(s)	107, 435, 645, 676, 1313, 1724
SpeI	ACTAGT	1 cut(s)	293
SphI	GCATGC	1 cut(s)	1457
SseBI	AGGCCT	1 cut(s)	142
SsiI	CCGC	6 cut(s)	88, 102, 118, 197, 584, 642
SspI	AATATT	2 cut(s)	253, 568
SspMI	CTAG	4 cut(s)	125, 294, 516, 777
StuI	AGGCCT	1 cut(s)	142
StyD4I	CCNGG	2 cut(s)	14, 492
TaaI	ACNGT	1 cut(s)	1298
TaiI	ACGT	2 cut(s)	365, 734
TaqI	TCGA	2 cut(s)	1374, 1589
TatI	WGTACW	1 cut(s)	1298
TauI	GCSGC	3 cut(s)	104, 200, 644
TfiI	GAWTC	8 cut(s)	263, 305, 551, 821, 1043, 1196, 1620, 1787
Tru1I	TTAA	6 cut(s)	108, 677, 857, 1212, 1314, 1725
Tru9I	TTAA	6 cut(s)	108, 677, 857, 1212, 1314, 1725
TscAI	CASTG	2 cut(s)	1273, 1354
TseFI	GTSAC	2 cut(s)	1337, 1432
TseI	GCWGC	7 cut(s)	90, 274, 899, 975, 1151, 1263, 1630
Tsp45I	GTSAC	2 cut(s)	1337, 1432
TspDTI	ATGAA	1 cut(s)	1677
TspRI	CASTG	2 cut(s)	1273, 1354
Vha464I	CTTAAG	4 cut(s)	107, 676, 1313, 1724
VneI	GTGCAC	1 cut(s)	1676
VpaK11BI	GGWCC	2 cut(s)	460, 1273
XagI	CCTNNNNNAGG	1 cut(s)	959
XapI	RAATTY	5 cut(s)	19, 217, 373, 1096, 1635
XbaI	TCTAGA	1 cut(s)	124
XceI	RCATGY	5 cut(s)	154, 289, 324, 1457, 1558
XcmI	CCANNNNNNNNNTGG	1 cut(s)	470
XspI	CTAG	4 cut(s)	125, 294, 516, 777
Zsp2I	ATGCAT	1 cut(s)	322

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.